Acipenser ruthenus (sterlet): 117417031
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Entry
117417031 CDS
T07327
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117417031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117417031
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117417031
Prokaryotic type
Archaeal type
TFB
117417031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
KIF9
BRF2-like_C_cyclin_rpt
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
117417031
NCBI-ProteinID:
XP_033884577
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All DBs
Position
11:38632376..38641441
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AA seq
318 aa
AA seq
DB search
MASTIRGDALALPKVQCPNHPEALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSND
KAAKDPSRVGDAQNPLLNGGDLSTMISKGTGSASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITNMSDRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactatccgtggtgatgctctagcccttcccaaagtgcaatgtccaaaccat
ccagaagcacttttggttgaagactaccgagctggagatatgatctgcccagaatgtgga
ctggttgttggtgacagagttattgatgttggatcagagtggagaacatttagcaacgac
aaagcagcaaaagatccgtctcgagttggtgatgcccaaaacccacttttaaatggagga
gatttgagtacaatgatcagcaagggaacaggttcagcaagttttgatgagtttggcaac
tcaaagtaccagaaccgcagaactatgagcagctccgacagagcgatgttaaacgcattt
aaggaaatcaccaacatgtcggacagaataaacctccccagaaatatcatagatcggaca
aataacttatttaagcaagtgtacgagcagaagagcctgaagggaagaagtaatgatgca
attgcttctgcttgcctttatattgcctgtagacaagagggtgttccacggacatttaaa
gaaatttgtgcagtctccagaatttctaaaaaagaaattggccgatgtttcaagctgatc
ctgaaggcacttgagacgagcgtggacttgataacaactggagacttcatgtccagattc
tgctccaacctggggttgcccaagcaagtgcaaatggctgctacctatattgcaagaaag
gctgttgagctcgacctggtacctggcaggagccctatctctgttgcagcggcagccatc
tacatggcatcacaggcctctgcagagaagaagactcagaaagaaatcggagacattgca
ggtgttgctgacgtcacaatcaggcagtcatacagactcatctatcctcgagctgcagat
ctctttccaccagactttaaatttgacacccctgtagataaacttccccagctgtaa
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