Acipenser ruthenus (sterlet): 117417086 Help Entry 117417086         CDS       T07327                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism arut  Acipenser ruthenus (sterlet) Brite KEGG Orthology (KO) [BR:arut00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:arut03000]     117417086    04121 Ubiquitin system [BR:arut04121]     117417086 Transcription factors [BR:arut03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     117417086 Ubiquitin system [BR:arut04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     117417086 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-CCCH zf-C3HC4 zf-CCCH_4 Prok-RING_4 zf-C3HC4_2 zf_CCCH_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 IFP_35_N Motif Other DBs NCBI-GeneID:  117417086 NCBI-ProteinID:  XP_033884717 LinkDB All DBs Position 11:21273366..21399010 Genome browser AA seq 1123 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IEQLPVNSALLQLVGGQIPKQQPITLFTGVEDTKHYDEARKCVEELALYLKPLSSTRGVG LNSTTQSALSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSPLSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPCPDAPPPMWEQLEKGLVAVKTVVHGLVDFIQNHSKKGTDQQQPSQHSKYKTYMCR DMKQKGGCPRGSSCTFAHSQEELEKYRKMNKRLAARRPLSQSLTQLNEVGLSGLLSDDGG LEGAVRKPSSLTNGIVAAGVGGHMPQLISRGTDCSYDTGLKPGKMEHLSISAPGSPPDLL DSVSKGSMPVMPINAHPMPHPRMPTEHPSKQLQMVSRGSQMYTQQPSDMYYQDPRPPASA APYEHPPYPAGVPYPYPSSQYVQPRYTRTAPSEPGMQFPDHYPYIQDRQYPGPPMQYPPM AQPVYPAHCDVRRTYGPPQSFQREEMVRMNPGPVEVLPPASGSPYLSESRERYPPEGYPP EGYPASPHPSQMRSYHRESYSRMTAPHPSLDYLHRRRKEIMAQLEERKVISPPPFAPSPT LPRPFPTDFPQEYLEDNPKAVGKYKENEYSPWSCDTIGSYIGTKDVKPKDIMASEAMELM NIESKGLRNQPVDMQRRSAEAKDDDPIIPFGTLPTVSRFGVISRTSKTGYQTTFPVQAMA SSQGAAPKHSSASAEFSPYTHGGWGAAPYHQHQNMTTQGRFSDRMPMPPDREQLKMELQQ LNQQINQQTQIRGMEAASNTLLLQREVSALATQPPPTKWAAEPISSEQLSMELHQVEREI GKRTREIAMESQAPHDQYKMKPAENGQPEHKVHMEDLSLALRYVRTAEQHKPCPNIGEGA NGSSLVQDSSMNSLSSKTSSLSLSADSTSSSELQVNGVGHSSS NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggaattcctcttgtgcccgatctgcacgcagact ttcgaagaaaccattcgcaagcccatcagcttaggatgcggccacactgtctgcaagatg tgcctgaacaaactacaccgcaaggcatgccccttcgaccagaccacgatcaacacagac atcgaacagctgcctgtgaactcggccctgctgcagctcgttggcggacagatccccaaa cagcagcccatcactctgtttacaggagtggaagacaccaaacactatgacgaggccagg aaatgcgtggaggagctcgctctctacctcaaacccctcagcagcacgagaggtgttggt ttgaacagcactactcagagcgctctcagccggcccatgcagaggaagctggtgacgctg gttcactgtcagctggtggaggaggaggggcgaatcagggccatgcgagctgcccgttcc ctgggcgagaggacagtcacggagctcatcctccaacaccagaacccacagcagctctcc tccaacctgtgggcagctgtccgagccaggggctgccagttcctcgggccagcgatgcag gaggaggctctgaagttggttctgctagccttggaagacggctcccccctgtcccgtaag gttctggttctctttgtggttcagagattggagccacgattcccccaggcctccaaaacg agcatcggtcacgtggtacaactcctctatagagcatcctgttttaaggtgacgaagcga gatgaggattcttcgctgatgcagctgaaggaggagttccgcacgtacgaagctctccgg cgggaacacgactctcagatcgtccagatcgccatggagggggggctgcgcatcgcccct gaccagtggtcctcgctgctctatggggaccagtcccacaaatcacacatgcagtccatc atcgacaagttgcagacgccggcctcattcgcccagagtgttcaggaactgaccattgcg ctccagcggacgggagaccctgccaacctgaaccgtctccgaccccaccttgagctgctg gctaatatcgacccctgcccagatgcacctcctcctatgtgggagcagctggagaagggg ctggtcgctgtgaagaccgtggtccacggactggtggatttcattcagaaccacagcaag aaaggcaccgaccagcagcagccttcacagcacagcaagtacaaaacttacatgtgtcgg gatatgaaacagaaaggggggtgccctcgggggtccagctgtacctttgcacattctcag gaagaactagaaaagtaccgcaagatgaacaagcgcctggcagccagaagacccctgagc cagtccctcacgcagctcaatgaagtggggttgtccggtctgctgtcagatgacgggggg ctggagggcgctgtgcggaaaccctcctccctgaccaacgggattgtagcagccggcgtg gggggtcacatgccgcagctcatctcccgtgggacagactgctcctacgacacagggctc aaaccagggaaaatggagcacctaagtatcagcgcccccggatctccccctgacttgctt gattctgtctctaagggctccatgccagtgatgcctattaatgcccaccctatgcctcac cccagaatgcccacagaacacccctccaagcagctccagatggtgtccaggggatcccag atgtacacacagcaaccgagtgatatgtactaccaggatccgaggccacctgcttctgca gccccgtatgagcaccctccttacccagcaggtgtaccctacccctacccatcttcacag tatgtccagcctcgctacaccaggacggcacccagcgagccgggcatgcagttcccagat cactacccctacatacaggacagacagtacccaggcccgcccatgcagtacccccccatg gcacagccagtgtaccctgcccactgtgacgtgcgccgcacctacggacccccacagtcc ttccagcgtgaggagatggtgagaatgaacccagggcctgtggaggtcctgccaccagct agcgggtcaccatacctctcagagagcagagagcgctacccccctgagggctacccacca gagggctaccctgccagcccacaccccagccagatgcgatcctatcacagggaaagctac agcaggatgactgccccacaccccagcctggactacctgcaccgccgccgcaaggagatc atggctcagctggaggagaggaaggtgatttccccccctccctttgccccgtccccaaca ctgccccgtccattcccaacggatttccctcaagagtatttggaggacaacccaaaagct gttgggaagtacaaagaaaacgaatactcgccttggtcatgtgacaccataggctcctac attggcaccaaggatgtcaagcccaaagacatcatggcgtcggaagccatggagctgatg aatatagagagcaaaggtttgaggaatcagccagttgacatgcagagaagatcagccgag gccaaagacgacgaccccataattccgtttgggaccctgcccacagtatcccgtttcggg gtgatctctcgcacctccaaaactgggtaccagaccaccttcccagtgcaggccatggct tcatcccagggagctgcacccaaacatagcagcgcttcagctgaattcagcccttatact catggaggctggggagcggccccttaccaccaacaccaaaacatgacaactcagggacgc ttcagtgacaggatgccaatgcccccagacagggagcagctgaaaatggagctccaacaa cttaatcagcagatcaaccaacagacacagatccgtggaatggaggctgctagtaacaca ttgctgctgcaaagggaggtgagcgcactagccacccagcctcctcccacgaagtgggca gcagagccgatttccagcgaacagctgagcatggaactgcaccaggtggagcgagagatt ggcaagagaaccagggaaatagccatggagagtcaagcacctcacgatcagtataaaatg aaaccggcagaaaatggacaacctgaacacaaggtccacatggaggacctctcccttgca ctcaggtatgtgagaacagctgagcagcataaaccttgtcctaatattggcgaaggcgcg aatggatccagcttggtccaagacagtagtatgaattctctgtccagcaagacctcctcc ctgagcctgtctgcagactccaccagcagttctgagctgcaggtgaatggcgtcggccac tcctcctcataa

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