Acipenser ruthenus (sterlet): 117417366
Help
Entry
117417366 CDS
T07327
Name
(RefSeq) uncharacterized protein LOC117417366 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117417366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117417366
Membrane trafficking [BR:
arut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117417366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_2
SH3_9
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
117417366
NCBI-ProteinID:
XP_033885372
LinkDB
All DBs
Position
11:complement(15494724..15753562)
Genome browser
AA seq
2253 aa
AA seq
DB search
MHLTCLPERYMHAKFTLSAYLLCWMILQLCKRVFLRCSPTCHQATETEDPASETDFIEDR
DSGPSPEETLQTKESSDTATEPAHEATEEYFDPQSWDSDTLSDTSPDGYEDSAVTESRAD
ENRTDCQLEIKSELNDISLGSAEGSSNTHRKACDVIPVLQHLHEKDYKSDSELVSVEQDL
ESACERQDENPLLSEPEVTGATSVAQTEQSLVILNTETPLKEAGISIFVDTISGQGVTKA
SQVLNFTNKKLKSNKLHPEANPASAEHNVVPDEPEPAAGSTADLSSPVAILGTTDSPAAQ
DEVEHHFYTFIDYTEERPLYSETSSEIRTIVAELLESLSQVESELIQDAPGIEDSQICLE
TQSKPEDDGSDSNSGVEERTSDGTAEQHCVESSDANCENVCAGLPESGLPELKVQLNGSS
SESESFCVLQEICPEGSSTGQGTSSETLEIPPDVTTTISTNSAELNEPCPVANSNVIQAD
LEVNFDQSLDHTSDGKSGIDEVKTKTAVESNNLQECETGTETDIFQRESLKDNNSVLSEI
PLKTIQITVSTSAQFNSVSEETYFENNTTPPEPQSDSNNNTETYNADHPIRTEVDQVLVG
ICSDHACQLTEEPPDFLSEEAVRIHFKDNLRENHCHLQADINYIVIINNQEKQVRSPSCS
EFKPSIADVEETPSNLDYEPNWSSNELVSGTSDEDLESDHACIKTAPQIETSVTNEFKTS
QKESVVSSVCHTNASVVTQDARDCTLNTGIENSSTGSGCHTDSQTNRKSSDSAGNTVVVA
NGNTIKASPDVGFKKSDHSVSSKFLAQRKTIVPENPVDTGQSSSARLSEAREILLQTVEE
EENSKNLLRETAVSGLSFDAKEGLKTTSCILPEQNSETTQLCCESILSAHEIPEEGSLEP
EINYNLGLVNNLQTILVASFPDEIQLKDESSLISCQETDQEVSIGTELLRSRVTANENLF
TGKTSSDKSTTERKAETKASGLSQIKDSDLANKLPDTVKEQQQSIGTSKHESSGKMTPVL
NGYMTSESQLCPTMVSQDADGVSTNSEEMDDNFYTFLGSNNSLHKAVQKQTSKSSTTGKT
SKSVFSKMPSFRRKKKPSRDNKENGENPSKDSTSAPQVEGSSEEKGQDNMTKDGVPTYKI
HYPLYRAHVSYGSDHLQHTPRSEELITDNSDEEDVFEKSSTLNQNMSKAFFSGRIEMDDN
GFNPSTPWTKHVRKLYNQSSSTVDGDTISSSGDQETKKSQTGENVCYKRSKSTDSLNLRM
RFALAHKSLSSFFESKSLEKENEEHSSKLDSEETKSKQISWRKFKKAKEAELLKRGVSAS
DAQSPRSHRQIHSEYATRISRDKQGGRASPAVKRATKSSDITEEASTVEIPRNPLEGSKS
ADGKKRKGPPNGLTIVCSDPSLRKSESSKNDLDVSHLEDVSPLTPISPCSQQAQANQLTP
SWSSNPTPSGVMDVPLRPMSPKPQSPRPGASRRSFRYPCRASAASLTSLGNGASLEGLTD
PPEKPKTLKPRAAQLLSVHSLDTDYQKEDSGSSSQSQTSLIISSSAINIHKDEDTIKSPV
QTPDQSLTLRKKYPSSTSPPRRPFSDLGSWTLPLPRATESPWMSSEKKMKELVKQCSSDD
LWIVEEKRRKQKLAREMPVSFSRQGAELSDDLWKARVRLSLTTSVPFPPLPLKAHSFSQS
TPIGLDCLGWRRRISYPVITDGAHDKTALMDDVGSEEDLYEDFRSSNHRFGHPGGGGEQL
AINELISDGSTVYAEALWDHVTMDDQELGFKAGDVIEVVDATNKEWWWGRILDSEGWFPA
SFVRLRVNQDEPMEEYLAKLEDGKAEDSSSSVRRHGPGFPSKDQMRTNVINEIMSTEKDY
MKHLKDICEGYIKQCRKRTDMFTEEQLCIIFGNIDEIYRTQKKFLKGLEKRFNKENPHLS
EIGSCFLEHQTDFQIYSEYCNNHPNACVELSKLMKVNKYVFFFEACRLLQKMIDISLDGF
LLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNAMKNVARLINERKRRLENIDKIA
QWQSSIEDWEGEDLLSKSSELIYSGEMAKISQPQAKSQQRMFFLFDHQLVFCKKDLLRRD
MLYYKGRIDMDDMEVLDVDDGKDKDFNVSVKNAFKLRSLLCDEVHLLCAKKPEHKQRWLC
AFDDERRQVQHDRETGFAITEVQKKQAMQNACKTHPAGKPKAVTRPYYDFLLRQKHSTLP
AALPQQQVFMLAEPKRKPSNFWQNIGRLTPFKK
NT seq
6762 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcacgtgtttaccggagaggtacatgcacgcgaagtttactttatcggcatac
ctgctgtgttggatgatactccagctatgcaagagggtgtttttgagatgctcgcctact
tgtcatcaggccacagaaacagaagaccctgcaagtgaaactgatttcatagaagatcgg
gattccggccctagcccagaggaaacactgcaaacaaaggaatcaagtgatactgctact
gaacctgcacacgaagcaacagaggagtattttgacccacagtcatgggacagtgacact
ctttctgacacaagcccagatggctatgaagactctgcagtaacagagtccagggctgat
gagaacagaacagactgccaactggaaatcaaatccgaactgaacgatatcagcttgggt
tcagccgaaggttcatcgaatacacatcgaaaggcttgtgatgttattcctgttcttcaa
cacctacatgaaaaggattacaaatctgactcagaactggtttctgtggagcaagattta
gaatcagcatgcgaaaggcaagatgaaaatcctcttctgtcagaaccagaagtgactggt
gctacttctgtggcacaaacagaacaatcacttgttattttgaatacagaaacaccacta
aaggaagctggaatttccatctttgtagacaccatatcaggtcagggtgttactaaagca
agtcaggtactgaactttacaaataagaagttaaaatcaaacaaacttcaccctgaagca
aatccagcatcagctgaacataacgtagtacctgacgagccagagcctgcagcaggatcc
actgccgatctaagtagtcctgttgcaattttagggacaactgactcccctgcagcacag
gatgaagtagaacaccatttttatacttttatagattatacagaagaaagacctttgtat
tctgagacaagttcagagatacgcacaattgttgctgagctactagaatctttgagtcag
gtggaatctgaactgattcaggatgcacctggaatagaggacagtcagatttgtttagag
actcaatcaaagccagaagatgatggttcagattcaaattcaggggtggaggaacgaact
tctgatggtactgcagaacagcattgtgtagagtcttctgatgcaaactgtgagaacgtt
tgtgcaggtttgcctgaatctggtctgcctgaactgaaggtacagttaaatggttcatct
tctgaatctgaaagtttttgtgtcctgcaagaaatatgtcctgaagggagcagtacaggg
caagggactagctcagagacattggagatcccaccagatgtgacaacaaccatttcaaca
aattcagcagaactaaatgaaccctgccctgtagccaattcaaatgtaattcaggctgat
ttggaggtaaattttgatcaaagcctggaccatacttcagatggaaaatctggaatagat
gaagtaaagactaaaacagctgtggaatctaataatttgcaagaatgtgaaacgggcact
gaaactgacatttttcagagagaaagtttaaaagacaataactcagtcttaagtgaaatt
ccacttaagacaatacaaataacagtgagcacaagtgcacaatttaatagcgtttctgag
gaaacttattttgagaataacaccaccccccctgaaccccaatcagacagtaataacaat
acagaaacatacaatgctgaccaccctataagaacagaggtagaccaggtactagttgga
atctgtagtgatcatgcttgtcaattaactgaagagccgccggattttttgtcagaggaa
gcagttagaattcactttaaggataatcttagagaaaatcattgccatttgcaagcagat
ataaattatattgtcattattaataatcaggaaaaacaagtgagatctcccagttgttca
gaattcaagccaagcattgcagatgtagaggagaccccaagcaacctagactatgaacca
aattggagcagcaatgagttggtttcagggacaagtgatgaagatctagaatctgatcac
gcttgtattaaaactgctccccagattgaaacttctgtcacaaatgaattcaagacctct
cagaaggagagtgtggtcagcagtgtgtgtcacacaaatgcaagtgtagtgacccaggat
gctagagattgtacattgaatacagggattgaaaacagtagcactggttctgggtgtcat
accgactcacagactaacagaaagtcttctgacagtgcaggtaacacagtagttgtggca
aacggtaacacaattaaagccagtccagacgtaggttttaagaagtctgaccacagtgtg
agtagcaaattccttgcccaaagaaagacgattgttccagagaatcctgttgatacagga
cagagctcctcggcaagactctcagaggcaagagagattttattacagacggtagaagag
gaggaaaacagtaaaaatcttttaagagaaacagcagtcagtggtctatcttttgatgca
aaggaaggtttaaaaactacatcatgcatattaccagaacaaaacagtgaaacaactcaa
ctgtgttgtgaatcgatcctgtctgcccatgaaattcctgaagaggggagcttagaacca
gaaataaattataacttggggttggtaaacaatctccagaccattctggtggcaagtttc
ccggatgaaatacaactgaaggatgaatccagtttaatcagctgccaggagaccgatcaa
gaagttagtataggtacagaactcctacgaagcagggtaactgctaatgagaatctgttt
actggcaaaacttcaagtgataagtcaacgactgaaagaaaagcagaaacaaaagcatca
ggactgagtcaaattaaagactctgatctggccaataagctaccagatacagttaaggag
cagcagcaaagcattggcacaagcaaacatgaaagcagtgggaaaatgacccccgtcctc
aatggttacatgactagtgaaagccaactctgtcccacaatggtatcgcaggatgctgat
ggggttagtaccaacagcgaagaaatggatgacaatttctatacattccttggcagcaac
aacagcctccacaaagctgtgcagaaacagacgtccaagagcagcacgactggcaagacc
tcaaaatcagttttctccaaaatgccctcgtttaggaggaaaaaaaaaccatcccgagac
aacaaagaaaatggtgaaaacccttccaaggacagtaccagcgcaccacaggtggagggc
agcagtgaggaaaaaggacaagataacatgaccaaggatggtgtacccacttataaaatc
cattatcctttatacagggcacatgtatcctatgggtcagatcatcttcagcacactcct
aggagtgaagagcttatcacagataattctgatgaagaggatgtctttgagaagagcagc
acactcaatcagaatatgagtaaagctttttttagtggtagaattgaaatggatgacaat
ggcttcaacccctccacaccatggacaaaacatgttagaaagttgtataaccagagttca
agcactgttgatggtgatactatcagcagctctggggaccaggagaccaaaaagtctcaa
actggggagaacgtgtgctacaagaggagcaaaagcacagacagcctcaacctgcgcatg
aggtttgctctggcccacaaatccttatcaagcttcttcgagtccaagtccttggaaaaa
gaaaatgaggagcacagttccaaactggacagtgaagagaccaagtccaaacagatttcc
tggaggaagttcaagaaagctaaggaagctgagttactgaaacgtggcgtgtcggcctca
gatgcacaaagcccaaggtctcaccggcaaatccacagcgagtatgccaccagaatatcc
agggacaaacagggaggtagggcgtctcctgctgtgaagagggccaccaagtccagtgac
atcaccgaagaagctagcacagttgaaatcccaagaaaccctctggaaggaagcaaatca
gcagatggcaaaaagaggaaaggaccacccaacggactgacgattgtctgctctgatcct
agtttacgaaaatctgaatcctcaaagaacgacttggatgtttctcacctggaagatgtc
agcccattgacaccaattagcccctgcagtcagcaagcacaagctaaccaactaacgcca
tcttggtccagcaaccccacgccttcaggggtaatggatgttcccctgagacccatgagc
cccaaaccacagagcccacgccccggcgccagcaggcggagtttccgctacccttgcagg
gccagtgcagcctctttgacctctcttggcaatggggccagtttagaagggctcaccgat
cccccagaaaagccaaagacattgaagcccagagcagcacaactcctgtctgtccattca
ctggacactgactaccagaaagaagacagtggtagtagcagccagtcacaaacaagcctt
atcatctcttcttcagccattaacatacataaagatgaggacactatcaaatcaccagtc
caaacacccgatcagtcgctcaccctgcgaaagaagtacccctcctcgacctcgcccccc
cgccgccccttctcagacctgggcagctggaccctccccctcccgagggccacggagagt
ccctggatgagcagcgagaagaagatgaaggagctggtgaagcaatgcagctctgatgat
ctgtggattgtagaagagaagagacgcaaacaaaagctggcaagggagatgccagtcagc
ttcagcaggcaaggagcagagctgtcggacgacctgtggaaagcccgggtgagactttcc
ctcactacgtcagtgccctttcctcctctgcccctgaaggctcacagtttctcccagagc
acccccattggcctggactgcctgggctggaggcgacggatctcctacccggtgatcacc
gatggagcccatgataagacagcgctgatggacgatgttggcagtgaagaggatctgtac
gaagatttccgcagctccaatcaccgctttgggcaccctggaggaggaggggagcagctg
gccataaacgagttaatcagtgatggcagtacagtgtatgcagaggccctgtgggaccac
gtcaccatggatgaccaggagctggggtttaaggcaggggacgtcattgaagtagtggat
gctaccaacaaggagtggtggtggggaaggatcctggacagcgagggctggttcccagcc
agctttgttcggctgcgtgttaaccaggatgaacctatggaggaatatttagccaaactg
gaggatggaaaggcagaagattccagcagctcagtacgccgacacggacctgggtttccc
agcaaggaccagatgaggaccaatgtcatcaatgagatcatgagcacggagaaggactac
atgaaacacttgaaggacatctgtgagggttatattaaacagtgtcggaagcgaacagac
atgtttacagaggagcagctgtgtatcatcttcgggaacatcgatgaaatctacaggact
cagaagaaattcctgaaaggcttggagaagaggtttaacaaagagaacccacacttgagt
gaaatcggatcctgtttcttagagcatcaaacagatttccagatctactcggaatattgt
aacaaccaccccaatgcctgtgtggagctctccaagctcatgaaggtcaacaagtacgtg
ttcttcttcgaggcgtgccggctgcttcagaagatgattgatatctctctggacggcttc
ctgctcactccagtgcagaagatctgcaagtacccactgcagctggctgagctgctcaaa
tacaccaacccccaacacagggattacaaagatgtggaggctgccttaaacgccatgaag
aatgtcgccaggctgattaacgagagaaagcgacgcctggagaacattgataaaatcgcc
caatggcaaagttcaatagaggactgggagggtgaagacttgttaagcaaaagttcagag
ctgatttactctggagaaatggccaaaatctcccagcctcaagccaagagccagcagcgc
atgttcttcttgtttgaccaccagcttgtcttctgcaagaaggacctgctgcgccgggac
atgctttactacaaaggccgaatagacatggatgacatggaagtgctggacgtggacgac
gggaaggacaaggatttcaatgtgagtgtgaagaacgccttcaagctgcgcagcctgctc
tgtgacgaggtccacctgctctgtgccaaaaagccggaacacaagcagcgctggctctgc
gccttcgacgacgagaggagacaagtgcagcacgacagggagacaggttttgccataacg
gaggtccaaaagaaacaggccatgcagaatgcatgcaagacccacccagcaggaaagcct
aaagctgtcaccaggccttactacgacttccttctgcgccagaagcactcaaccctgcca
gccgccctcccccagcagcaggtcttcatgctggccgagcccaagcgcaagccctccaac
ttctggcagaacattgggagactgacaccctttaagaaatga
DBGET
integrated database retrieval system
