Acipenser ruthenus (sterlet): 117417382
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Entry
117417382 CDS
T07327
Name
(RefSeq) leucine-rich repeat-containing protein 7-like isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117417382
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
117417382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_1
PDZ
LRR_LRWD1
LRR_EndoS
PDZ_6
LRR_5
LRR_NXF1-5
PDZ_2
LRR_At5g56370
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
117417382
NCBI-ProteinID:
XP_033885400
LinkDB
All DBs
Position
11:complement(26139226..26480926)
Genome browser
AA seq
1513 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSMPDNDLSSLPATIASLVNLKELDISKNGIQDF
PDNIKCCKCLTIIEASVNPIAKLPDGFTQLLNLMQLYLNDAFLEYLPANFGRLTKLRILE
LRENHLKTLPKSMHKLTQLERLDLGNNEFTDMPEVLEQIQNLKELWMDNNGLQTLPGSIG
KLKQLTYLDMSKNRVETIDSEISGCEALEDLLLSSNMLQQLPDSIGMLKKLTTLKVDDNQ
LTVLPNTIGSGRAKLGLSLLEEFDCSCNELESLPPTIGYLHNLRTLAADENFLSELPREI
GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLRNLPFSFTKLKELAALWLSDN
QSKALIPLQSEAHPETKLRVLTNYMFPQQPRNEEDYQSDNDSFNPTLWEEQRQQRMTVAF
DFEDKKEEEENSGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKTSHALTGDKRDSSTN
MELQVKDKYEHKWPISTKEVTSEVTDRETKDFQKTQMTESSTSHNSAMEIPKRKEKDELT
ESSEIALHRVVPKQQQPETLSLTASCFCLIDSLGGSPNDIRISDMRPTLVEPPLYKPKVV
LMGKEKKESTDESDTDKMHCLNNSGSSATYSDYSPSQGSSGSSNPPGNVGGLQTGSKDGV
VPTHWTNRLSQSFPQPIETKPLLSQRESAPAGITQQRNERHPLSDAFDNWNDGSHYDNTG
FVAEETAMENSGATPMLGSTSRSASSHGRRPLTRQDRIVGVPLELEQLPHTFHNVRNTPE
TEVSAPNPWQNWTRTPSPFEDRTAFPSKLESTPVSSPAPDRKDFEQEMGELPGTFPSTGA
WGFLESRESGASRSHSNIFHCRQDPVKGAIVISKSTERLSPMMKEVKAKFKKSQSIDEID
IGSYKVYSIPLDNYGSSMENQGSLDKPETQPSQEQSMSRSQSVPMLDEDLEGYASGKGSQ
QQKPPIPKKVYHFDQSFNPKGAMDVKSERRLPTSFNTNPEYMSQQGKNIPKEVLSPRGYR
GYTPMEHMFSFSQPSVNEDSISQQFPSQRSRPGFLRRADSLVSSTEMALFRRVTEVQDLP
LNDRYNRTHYKGMLEHQNSMSSMAESQFQKRNGRYEDEYSSYQETKKPITGFPVKNLTQR
RPLSARSYSTESYGTSQARPVSARPTMAALLEKVPSDYNLSTCTEKTSDNEMKMHTAQMK
GDDSSSKMPVDWRQQLLRHIEAKRLDRTPSQQSNVLDNGQEDASPTTQWAPYSLGRRDVP
PENIIKKLPDSLPNGLNYPQAGSHSHQVQTMMVSSTQNPQHRSSRDQQYEGAINKISIQQ
YQSPLPIPISSTQSLSSPRGAQSGRCLIQTKGQKSMDGYQDQFCVRIEKNPGLGFSISGG
ISGQGNPFKPSDMGIFVTRVQPDGSACNVLQPGDKILKANGHSFSHLEHEKAVSLLKSFP
KTVDLVILRENTS
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcaacccttcagttgcagtgtctggagatgacaaccaagaggaagctc
attggccgcctggtgccctgccgatgcttccggggtgaggaagaggtcatctcagtgctg
gactactcccactgcagcctccaacaggtgccaaaggagatcttcagttttgagcgcacg
ctagaggaactttatctagatgctaatcagattgaagagctacccaagcaattatttaac
tgtcaagcactgcgcaaactgagcatgcccgacaatgatctttccagtctgccagccacc
atcgccagccttgtaaaccttaaggagctagacatcagcaaaaacggtattcaagatttt
ccagataacattaaatgctgtaaatgtttaacaattattgaagccagtgtcaatccaatt
gccaaactcccagatggcttcacacagctgctaaacttaatgcagctctacttaaatgat
gcctttctggaatatcttcctgccaacttcgggaggcttaccaaattacgcatcttggaa
ctacgggaaaatcacctgaaaactttaccaaagtcaatgcacaaactgacacagctggag
cgtttagacctgggcaataacgaattcacagacatgccagaagtcctggagcaaatacaa
aacctgaaggagctgtggatggataacaacggattgcagacactaccagggtctataggg
aagttaaagcagttgacgtatttggacatgtccaagaacagggtagaaaccattgacagt
gagatttctggttgcgaggctctagaggacctcctcctgtcatccaatatgttgcagcag
ctgccagactctataggaatgttaaaaaagctaacaactctgaaagtggatgacaaccag
ctgaccgttctgcccaacacaatcggaagtggacgcgccaaattaggtttatcgctttta
gaagagtttgattgtagctgtaacgagcttgagtcccttcctcccaccattggatacctc
cataatctccggacgttagctgctgatgaaaacttcctgtctgagttgccgagagagatc
ggaagctgtaaaaatgtgactgtcatgtctctgcgctccaataagcttgagtttctgcct
gaggagattggacagatgcagaagctgagggttttaaatttgagcgacaacaggttaaga
aacttgccgttcagttttacaaagctgaaggaacttgcagcactttggctttcagataat
cagtccaaggcacttatccccctacaaagcgaggctcatccagaaacaaagctgagggtg
cttaccaactacatgtttccacagcagccacgcaatgaagaagattaccagtcagacaat
gacagtttcaacccaaccctatgggaagagcagcgacagcaacgcatgactgtggccttt
gactttgaagacaagaaggaagaagaggagaactctgggaaagttaaggttgaaataaac
ctgaaacgctatcccacaccctatcctgaggacctgaagaacatggtgaagtcagtgcag
aatctggtgggaaagactagccacgccctaaccggagataagcgtgattccagcaccaac
atggagctccaagtcaaggacaaatacgaacacaagtggcccatctcaacaaaggaggta
acaagcgaggttacagatagagaaaccaaagacttccagaagacacagatgaccgaatca
agtaccagccataattctgccatggaaatcccaaagcgaaaagagaaggacgagctaact
gagagctccgagattgctttacatcgagtcgtccccaagcagcaacagccagagactctc
tcccttacagcttcctgtttctgcctcatagattccttaggaggctcaccaaatgacatt
cgaatttcggatatgcgacctaccttagttgaacctcctttgtacaagccaaaagtcgtt
ttgatgggtaaagaaaagaaagaatcgacagacgaatcagacacagataaaatgcactgt
ctaaataacagcggttcctctgccacttactcagactactccccttcccaggggtcctca
ggctcctcgaaccccccggggaatgtgggcggtctgcagaccggttccaaggacggggtg
gtgcccacccattggacaaacaggctatctcagtctttcccccagcccatcgagacaaag
ccattgctcagccagagagaatctgccccagcgggaatcacgcagcagcgcaatgagagg
cacccacttagtgatgcctttgacaactggaacgacggctcccattacgacaacactggc
ttcgtcgcagaggaaaccgccatggaaaattcaggcgccaccccaatgctaggctccact
tccagaagcgcttccagccatggacgcaggcctctaacaaggcaggataggatagtgggt
gtccctctagagctggagcagttgccacacacgttccacaatgtccgaaacacacccgaa
actgaagtgtctgctcctaacccttggcagaactggacaaggacccccagcccctttgaa
gacaggactgcgtttccttccaagctggaaagtactccagtgagcagcccagcccctgac
aggaaggacttcgagcaagaaatgggtgagctacctgggaccttcccgtctaccggggca
tggggcttcttggaatcccgagagtcgggagctagccggagccattccaacatattccac
tgcaggcaagaccctgttaaaggtgctattgtcatcagtaaaagcacagagaggctgtct
cccatgatgaaggaagtgaaggccaagttcaaaaaatcccagagcattgatgagattgat
attggatcatataaggtttacagcatcccgcttgataactatggctccagtatggaaaac
caaggcagcttggacaagcccgaaacccaaccatcacaggagcaaagcatgtcgcgcagt
cagtcggtccccatgctggatgaagatttggaagggtatgccagcggcaaggggtcccag
cagcagaagcctcccatccctaaaaaagtttaccactttgaccaaagcttcaaccctaaa
ggggcaatggatgtgaagtctgagaggaggctacctacctccttcaacaccaaccctgag
tatatgagccaacagggtaagaacatccccaaggaggtgctgagtccaaggggatacagg
gggtatacacctatggagcacatgttctcattttcccagccttcagtcaatgaggactcc
atcagccagcagtttccaagccagaggtcccggcctggattcctccggagggcagactcc
ctggtcagctccacggagatggctctcttcagaagggtaacagaagtccaagatctaccg
ctcaacgaccggtataacaggacacattataaaggcatgttggagcaccagaacagcatg
tcctccatggcagaatcccagttccagaaaaggaatggtaggtatgaggatgaatactcg
tcgtatcaggagacaaaaaagcccatcacaggtttccctgtgaaaaacctaacccagcga
cggcctttgtcagcccggagctacagcacagagagctacgggacttcccaagcgaggccg
gtgtctgctaggcctactatggctgcactcctagaaaaagtcccttccgattacaatctt
agcacctgtacggaaaagacctctgacaacgagatgaagatgcatacagcacagatgaaa
ggggatgacagctcttcaaaaatgccggtggactggaggcaacaactgcttagacatata
gaggctaaaagattagaccggactccatctcagcagagcaacgtcttggataacggacag
gaagacgcgtctccaaccacccagtgggctccgtattcactgggccggagggacgtacca
ccggagaacatcataaaaaaactccctgactctttgcccaacgggttaaattacccacag
gcaggtagccactctcaccaagttcagacgatgatggtgtcctccacgcagaacccccag
caccgatcttcccgagaccaacagtatgaaggtgccatcaataaaatctccatccagcag
tatcagtcaccgctgcccatccccatctcctccacgcaaagcctttccagcccgcggggg
gctcaaagcggacgctgcctgatacagacgaaggggcagaaaagtatggatgggtatcag
gaccagttttgtgtacgaatcgagaagaatcctggccttggtttcagcatctcaggagga
attagcggacagggaaatccatttaagccttcagatatgggtatctttgttactagggta
cagcctgacggatcggcctgcaacgtcttacaacctggggataagattctaaaggcgaat
ggacatagtttttcacacctggaacatgaaaaggctgtgtcattgctgaagagtttcccg
aaaacagtggacctggtaatcttgagggagaatacatcttaa
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integrated database retrieval system
