Acipenser ruthenus (sterlet): 117417617
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Entry
117417617 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
arut04137
Mitophagy - animal
arut04144
Endocytosis
arut04340
Hedgehog signaling pathway
arut04350
TGF-beta signaling pathway
arut04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117417617
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117417617
04350 TGF-beta signaling pathway
117417617
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117417617
04137 Mitophagy - animal
117417617
09144 Cellular community - eukaryotes
04520 Adherens junction
117417617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117417617
04121 Ubiquitin system [BR:
arut04121
]
117417617
03029 Mitochondrial biogenesis [BR:
arut03029
]
117417617
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117417617
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117417617
Autophagy
Mitophagy
Other mitophagy associated proteins
117417617
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
HECT type E3
117417617
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117417617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
117417617
NCBI-ProteinID:
XP_033885652
LinkDB
All DBs
Position
13:34588453..34608366
Genome browser
AA seq
742 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPTDSDAVRGQIVVNLQTRDRIGTGGPVVDGRGLLENEGPVFEDSGPGRPLSCFMEEPL
PYTDSTGAAGGGNCRFLESPNQEQRLQAQRLRNQDTRGHAHTPQNRPHGSQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRVNNGLQWYFRRDLNSVSCEDLGPLPPGWEVRS
TVSGRIYFVDHNNRTTQFTDPRLHHIMSQHSQVKESGQQLPVQTEVPPEDGEGELPVRYE
RDLVQKLKLLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRHKDLKKRLMVKFRGE
EGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRI
MGLAVFHGHYINGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILENDITPVLDHTF
CVEHNAFGKFLQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELI
PQHLLKPFEHKELELIIGGLGKLDLNDWKANTRLKHCVADSNMVKWFWQAVESFDEERRG
RLLQFVTGSTRVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYE
TYEKLYEKLVTAVEETCGFAVE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctggcacacgaaggaacgggtcgagcatcaaaatccgtctgacagtatta
tgtgccaagaacctggcaaagaaggatttcttcaggttacctgacccttttgccaaaata
gtagtagatggatcaggtcagtgccattcgacagacacagtgaagagcacactggaccca
aagtggaaccagcactatgatctatatattggaaaaacagactcgatcacgatcagtgta
tggaaccacaagaaaatccacaagaaacagggagctggcttcctgggctgtgtgagactc
ttatccaatgcgatcagcaggctaaaggacactggctaccaacgtttggatctatgcaaa
ctaaaccccactgacagcgatgcagtacgtggccaaatagtagtaaatttacagactcga
gacaggataggcactggaggacctgttgtggacggtagaggacttttagaaaatgaaggc
ccagtttttgaagactcggggcccggaaggccgctcagctgtttcatggaggagccgttg
ccatacacagacagcactggagccgcagggggagggaactgccgcttcctggaatcgccc
aatcaagagcagaggcttcaggcacagcgcctccgtaatcaagacaccagaggtcacgca
cacacccctcagaaccggccacatgggagccaatcccccgacctgcctgagggttacgaa
caaaggacgacagtacaggggcaggtgtactttctacatacacagactggagtcagtacc
tggcacgacccaagaataccaagggttaataacggtttgcaatggtatttccgcagggac
ctcaacagtgtcagctgcgaagatttaggtcctctgcctccagggtgggaggtcagaagt
acagtatcgggaaggatatattttgtggaccacaataacagaacgacacaattcacagac
ccaagattgcaccacataatgagtcagcattctcaggtaaaggaatcaggccagcagctg
ccagtgcagactgaggttcctccagaggatggagaaggagagctccctgtacgctatgag
agggacttggtgcagaaactgaaattgctaaggcatgagctctcattgcagcagccacaa
gccgggcactgtcgcattgaggtatccagggaggagatttttgaggagtcttacagacag
atcatgaagatgcgacacaaagacctgaagaaaaggctgatggtaaaattccggggagaa
gaaggactggactatggtggggtggcaagggagtggttgtatctcttgtgtcatgaaatg
ctaaatccgtattatggactgttccagtattccacggataacatttacacgctgcaaata
aatccagactcctctattaatccggatcatttgtcttatttccactttgttgggcggata
atgggcctggctgttttccatggacactacattaacggaggttttacactgcctttctat
aagcagctgctgggaaaacccatacagctgtccgacctggaaactgtggatccggagttg
cacaaaagcttagtgtggatccttgagaatgacatcaccccagtactggatcacacattt
tgtgtagagcataatgcatttggtaaatttctccaacatgaactcaaaccaaatggaaga
aacattcctgtaacagaggagaacaagaaggaatatgtaaggttatacgtgaactggagg
tttatgagagggattgaggctcagtttctagccttgcaaaaaggatttaacgagttgatt
ccacagcatttgttaaagccctttgaacacaaggaactagagctaatcattggaggtctg
ggtaagctagacctcaacgactggaaggccaatacccggctgaagcactgtgtggctgac
agcaacatggtcaagtggttctggcaggcagtggaatcgtttgatgaggagaggagagga
aggcttctgcagttcgttacaggctccacccgcgtccctctgcaggggttcaaagcactg
caaggttctacaggttctgcaggacccagactcttcactatccatctgatcgatgccaac
acagataacctgcccaaagcccacacttgctttaatcggattgacatcccgccgtacgaa
acgtatgaaaagctgtatgagaaacttgtgactgccgtggaggagacctgtgggtttgct
gtggagtga
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