Acipenser ruthenus (sterlet): 117417705
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Entry
117417705 CDS
T07327
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X2
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117417705
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117417705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117417705
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117417705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
117417705
NCBI-ProteinID:
XP_033885804
LinkDB
All DBs
Position
13:complement(7263169..7285198)
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AA seq
903 aa
AA seq
DB search
MDNLMIEGDQLTYEDLSTYNFLPPISSIHVKAEPYLETANGPYLAIIEEPKQRGFRFRYE
CEGPSHGGLPGASSEKNKKTYPTVKIYNHVGYARVEVQLVTHSDPPRVHAHSLVGKQCSE
HGVCSVNVGPNDLTAQFNNLGILHVTKKGVSEVLTKRLKAERRRQRGEDAVITAQEEQEI
ANEARELGKVTDLNVVRLKFMAYLQDSNGGFTLALKPVISQPIYDSKSPNASNLKISRMD
KTSGSATGGDEIFLLCDKVQKDDIEVRFYEDDDNGWEAYGDFAPTDVHKQYAIVFKTPPY
RRNQIDRPITVFLQLKRKKGGDASEPKQFTYHPQIQDKEEVQRKKLKPLPHYQDHYGRGG
AGGPPGGFGAGGPGGGGGGGFFPFPHSVNSSFSYNPMGGGYQGGTQMPGAAQRQDSPASS
GAPQGGLTPQQQLIQIASLIQSKATLTARRTARALLDYASTGDARMLLAVQRQLCGVQDE
NGDTPLHLAIIHQQASVVEKLVQVIVSIPDQRILNQSNHLRQTPLHLAVITKQYKIVDFL
LKAGADPTPLDHYGNSVLHLATSTGDEHMLRILLSHLKPHSRYLLDTPDYNGLYPLHLAV
QRSGEQCLRMLVGAGAKVNAVERKSGCTALHLAVQQDLFAVACLLITELNADVNVCSFGG
NTPLHLAASQGSPVLCSMLIAAGAERLVENDEPVCMSSASSSEEEREETQEEESRGREGA
ESAQTLTARPHSLASNPRKRPPTRGHTPLDLAKSQKVQDILEGKPRRPGKTPAKLKTAPL
AGTVCPLDSDTLARLSTALSAGEVQWKQLAEKLGMRTLADLYEECPSPCHSLLQGYQVAG
GRVESLIDALQALGLNEGVRVLREAELKDKTHTTEVKVDSGYDSQSTEQLEQEKMDESVP
ANS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggacaatctaatgatagaaggcgatcagctgacttatgaagatttatccacgtataat
tttttaccaccaatctcaagcatacacgttaaagcagagccgtacctggagacagctaat
ggtccctaccttgcaataatcgaagagccaaaacagagaggatttcgttttcggtacgag
tgcgagggtccctcacacggagggctgcccggggcgtccagtgaaaagaacaagaagacc
taccccactgtcaagatctataaccacgtgggctatgccagggtggaggtgcagctggtg
acgcactcggacccgccccgcgtccacgcgcacagcctggtggggaagcagtgcagtgaa
cacggggtgtgcagcgtcaacgtggggcccaacgacctcactgcacagttcaataacctg
ggtatcctacacgtcacgaagaagggagtgagtgaagttctgaccaagaggctgaaggcg
gagaggaggaggcagagaggggaagacgcggtcatcactgcgcaggaggagcaggagata
gcgaacgaggctcgggagctgggcaaggtgacggacctgaacgtggtgaggttaaagttc
atggcgtacctgcaggacagcaacggggggttcaccctcgccctgaaacctgtcatctcc
cagcccatctacgacagcaagtctcccaacgcatcgaacctgaagatctctcgcatggac
aagacgtcgggctctgcaacgggaggggacgagatcttcctgctctgtgacaaagtgcag
aaagatgacattgaggtgcgcttctatgaggatgatgacaatggctgggaggcgtacgga
gacttcgcacccacagacgtgcacaagcagtacgccatcgtgttcaaaacccccccctac
aggaggaatcagatcgatcgccccatcaccgtgtttctgcagctgaaacgcaagaagggg
ggtgatgctagcgagcccaagcagttcacataccacccccagatacaagacaaggaggag
gttcagaggaagaagctgaagcccctccctcactatcaggaccactacgggcgagggggg
gctgggggtccgccagggggcttcggagcaggggggccaggaggaggaggaggcggtggt
tttttcccctttccccattcagtgaactccagcttctcttacaaccccatggggggaggc
taccaggggggcacccagatgcctggagcagcgcagcgacaggactcccctgctagcagt
ggggcccctcaaggggggctgaccccacagcagcagctcatacagatcgcatcgctcatc
cagtccaaggccacactgacggccaggcgcacggcccgcgctctgctcgattacgccagc
acgggagacgcgcgcatgctgctggctgtgcagagacagctgtgcggggtgcaggacgag
aacggggacactcctctgcacctagccatcattcaccagcaggccagcgtggtggagaag
ctagtgcaggtcatcgtgagcatcccagaccagaggatcctgaaccagagcaaccacctg
agacagactcctttgcacctggctgtgatcacaaagcagtacaagatcgtggacttcctt
ttgaaggcaggcgctgaccccacccccctggatcactatggcaactcagtgctgcacctg
gccacgtctactggcgacgagcacatgctgcggatactgttgagtcacctgaaaccacat
agccgctacctgctcgacacacctgactacaatggtctctacccccttcacctcgcggtg
cagaggtccggtgagcagtgcttgcgcatgctggttggtgccggagcgaaggtgaatgca
gtggagaggaagagtggctgcactgccctgcacctggctgtacagcaggacctcttcgct
gtggcctgcctactcatcacagagttgaacgctgatgtgaatgtctgctcgttcggtggg
aacacccccctgcacctggctgccagtcagggctcccctgtgctgtgctccatgctcatc
gctgcaggtgctgagaggttggtggagaacgatgaaccagtctgcatgtcctctgcatcc
tcgtctgaggaagagagggaggagacacaggaggaggagagcagggggagagagggggca
gagtcggcacagaccctcaccgcacgcccgcacagcctggcctccaacccccgcaagaga
ccccccacgcgaggacacacccccctagacctggccaagagccagaaggtgcaggacatc
ctggaggggaagccgagaagaccagggaagacccccgccaagctgaagaccgcccccctt
gcaggtactgtctgccccctggacagtgacaccctggcccggctcagcactgccttgagt
gcgggggaggttcagtggaagcagctggcagagaagctgggcatgaggaccctggctgac
ctgtatgaggaatgcccttccccctgccacagtcttctgcagggctaccaggtggcgggt
ggccgtgtggagagcctgattgatgctctgcaggctctgggtctcaatgagggagtgagg
gtgctgagggaggccgagctcaaggacaagacccacaccacagaggtgaaggtggacagt
ggctatgacagtcagtccacagagcagctagagcaagaaaagatggacgagtctgttcca
gccaactcctga
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