Acipenser ruthenus (sterlet): 117417743
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Entry
117417743 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117417743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
arut04990
]
117417743
Domain-containing proteins not elsewhere classified [BR:
arut04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117417743
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GFIT
Motif
Pfam:
LIM
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117417743
NCBI-ProteinID:
XP_033885919
LinkDB
All DBs
Position
13:complement(7417350..7426265)
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AA seq
454 aa
AA seq
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MEFIFKSDLCTPNEHAPVSTSPALDTVPAASANQLASAAQNLANQVSPQPPAPAAPAHQS
APAPAGGAPAQPEASPGSRNLSLAATAISSAITAQASASFSMQSSSSSYSVQSKTTTTSS
FPQPSAVQQRAVQTPASPPKVVSTINIVPTANLPAPAPAPVYTPAPAPVYIPAPAPVYTP
APVPXLLPPPAPASSGRPPWVMDDSFAQKFVPGASTTTLTKHIQPLPQAAPLPPAIIPNS
SLPQHPAPSPAPFSTPSVGRGILQRAERFPAGNRTPLCSSCNGIIRGPFMVALGRSWHPE
EFNCHYCHTSLADASFVEEQNNVYCEGCYGQFFAPTCARCNTKIMGEVMHALRQTWHTTC
FVCAACNKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGQTWHDS
CFVCAVCNVNLEGKPFYSKKDKPLCKKHAHAINV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaatttattttcaagagcgacttgtgtactcctaatgagcatgctccagtgtccaca
agccctgctcttgatactgtgcctgccgcttcggccaatcagcttgcttctgctgcacag
aacctggccaatcaggtgtcccctcagccaccggcccctgcagcacccgcccaccaaagc
gctccagccccagcagggggcgctccagcacagcccgaggcttcaccggggtccaggaac
ctgtcgctggcagccaccgccatctcctccgctatcactgcgcaggctagtgccagcttc
agcatgcagtcctcctcttcctcctacagcgtccagtccaaaaccaccacgaccagctcc
ttcccccagccctcggcggtgcagcagagagcagtgcagacccctgcctctcctccaaag
gtcgtcagcaccatcaatattgtgcccactgccaacctccccgccccagccccagctcca
gtatatacccctgccccagctccagtatatatccctgccccagctccagtatacacccct
gccccagttccanngctgctgcccccccctgccccggcctcctctggtcgccccccctgg
gtgatggacgactccttcgctcagaagtttgttcctggggctagcaccactaccctcacc
aaacacatccagcctctcccccaggctgccccccttcctcctgctatcatccccaactcc
tccctcccccagcacccagcccccagccccgcccccttctccaccccctccgtaggccgc
gggatcttgcagagggcagagcgcttcccggcaggcaaccggaccccgctgtgtagctcc
tgcaacggcatcatcaggggtcccttcatggtggcgctggggcgctcctggcacccggag
gagtttaactgccactactgccacacctccctggcggacgcgtccttcgtggaggagcag
aacaacgtgtactgcgagggctgctacgggcagttctttgctcccacctgcgcccgctgc
aacaccaagatcatgggggaagtgatgcatgcactgaggcagacctggcacaccacctgc
ttcgtgtgcgctgcctgcaacaagcccttcggaaacagcctcttccacatggaggacgga
gagccctactgcgagaaagactatatcgctctgttcagcactaagtgccatggctgtgac
ttcccagtggaggcaggtgacaagttcattgaggccctgggacagacctggcacgactcc
tgcttcgtctgcgcggtgtgcaacgtgaatctggaaggaaagccgttctactccaagaag
gacaaacctctgtgtaaaaagcacgctcacgccatcaacgtgtag
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