Acipenser ruthenus (sterlet): 117417766
Help
Entry
117417766 CDS
T07327
Name
(RefSeq) neurexin-3 isoform X1
KO
K07377
neurexin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117417766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117417766
Membrane trafficking [BR:
arut04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117417766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117417766
NCBI-ProteinID:
XP_034761804
LinkDB
All DBs
Position
24:6132444..6434577
Genome browser
AA seq
1691 aa
AA seq
DB search
MNPTCFTFKTHLLLNTLFGLCFGLEFTGTPGQWARYLRWDASTRSDLSFQIKTDVSTALL
LYFDDGGYCDFLQLMIVEGKMQLQFSIDCAETTIVSDKRVNDSKWHFVMLSRSNLRTVLV
VDSETQADEVRPQRQYMKIVSDLFIGGVPLDIRSSALTLPPVKDQPLFKGIITDLKYGNA
EPNLLGSQAVRLGMEGMCTENPCENGGSCSIIDGEPKCDCSITGYVGRFCSEEVNHVPGF
SHLMMGEQGKSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHA
MVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDIRLELSRLARIGDPKMKIQGDVAFKCENVATLDPISFETPEAFISLPKWNTKRMGSIS
FDFRTSEPNGLILFTHGKPQDRKDSRSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKA
TQKKVNDGDWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGL
ILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEEQNGAGIKPSCSKITSKQCESYPC
KNNAVCKEGWNRFICDCTGTGSWSRTCEREASILSYDGSMYMKVVMPMVMHTEAEDVSLR
FMSQRAYGLLMATTSRESADTLRLELDGGRVKLTVNLDCIRINCNSSKGPETLYAGQKLN
DNEWHIVRVVRRGKSLKLTVDDDTAEGQMVGDHTRLELHNIETGIMTERRYISVIPSSFI
GHLQSLMFNGMLYIDLCKNGDIDFCELNARFGMRSIIADPVTFKSKSSYLSLATLQAYTS
MHLFFQFKTTTPDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDKALHDN
QWHNVVITRDNSNTHTLKVDAKAVTQVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASR
DGFQGCLASVDLNGRLPDLINDALYRSGQIERGCEVEFTKADLQGPSTTCQEDSCANMGI
CIQQWENFTCDCSMTSYAGNQCNDPGATYIFGKGGGLIRYTWPANDRPSTRTDRLAVGFS
TSLKDGILVRIDSAAGLGDFLQLHIEQGKIGVTFNIGTIDISIQETSTPVNDGKYHVVRF
TRNGGNATLQVDNWPINEHYPTGSSDYERLQMVNKKIPFKYTRPVEEWLQEKGRQLTIFN
TQATITIGGNDRKRPFQGQLSGLYYNGLKVLNMAAENNINIKINGSVRLVGDVPSVLGST
TTSMPLEMSTTFIETTTTMSTTTTRKHRSPPTIQTTDDIVSSAECSSDDEDLDECDTGHP
GGIGGELVIPVLVEDSLEIPPIATRAPFITLPPTFRPLLTIIETTKDSLSMTSEAGLPCL
SDQGSDDCDDDGLVISGYGSGEAFDSNLPPTDDEDFYTTFSLVTDKIMSTSAFEGGYKAQ
APKWESKDFRPNKAFESGRTTTTSLSPELIRTTTSSTPEMVPKLPAGKMNNRELKPQPDI
VLLPLPTAYELDSTKLRSPLITSPMFRNVPTANPTEPGIKRVPGASEVVRESSSTTGMVV
GIVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGAVLKEKQQSAKSSNK
KQKNKDKEYYV
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctacgtgcttcacattcaagacacacttgttgctcaatactttatttggcctg
tgttttggccttgagtttacagggactcctggacagtgggcccgttacctccgctgggat
gccagcacaagaagtgacctaagctttcaaatcaaaacagatgtttccactgccctgctt
ctctatttcgatgatggcggatactgtgattttctccagctgatgatagttgaagggaaa
atgcagttgcagttcagcattgactgcgcagagaccaccattgtttctgataaaagggtg
aacgacagcaagtggcactttgtcatgctgagtcgcagcaatctaagaactgtcctagta
gtggacagtgaaacacaagcggatgaggtcaggccacagaggcagtacatgaaaattgtt
agcgatctgttcattggaggggttccattggatatccggtcatctgcgttgactctgccc
ccagtgaaagaccagccattgtttaaaggaattatcacagatctcaagtatgggaacgca
gagcccaaccttcttggcagtcaagctgtaagattgggcatggaaggcatgtgcacagaa
aatccatgtgaaaatggtggaagttgctcaataatagatggggaaccaaagtgtgattgt
tccatcacaggatatgtgggacgattctgcagtgaagaagtcaaccatgttccaggtttc
tcacatctgatgatgggtgaacaaggtaaaagcaaagcgagagaggaaaacgtcgccacc
ttccgaggatccgagtacttttgctatgacctgtctcagaaccccatccagagcagcagt
gacgagatcaccctgtccttcaaaacatggcagagaaacgggctcatcctgcacacaggg
aaatcggcagattacgtcaaccttgccctgaaggacggagctgtgtccctcgttattaac
cttggatcgggggcgtttgaagcaatagtagagccagtaaatggcaaattcaacgacaac
gcatggcatgatgttaaagtcacacgcaacttgcggcagcactcaggcattggacacgct
atggtaacaatttctgtggatggtatcctcaccacaactggttatacacaagaagactac
accatgcttggctcagatgatttcttctatgttggtggaagccctagtacagctgatcta
cctggttctcctgtcagcaacaatttcatgggctgcttgaaagaggttgtttataaaaac
aatgatatcagattggagctgtcgcgtctggccaggatcggagaccccaaaatgaagatt
caaggagatgtggcgtttaagtgcgagaatgtagccaccctggaccccatatcgtttgag
accccggaagcgttcatcagcctccccaaatggaacaccaaaaggatgggctcgatctcc
ttcgacttccgcacatcagagccaaacgggcttattctgtttactcatgggaaaccccag
gacaggaaagattccagaagtcagaagaacactaaggtcgacttctttgccgtggagcta
ctggacggcagtctgtatttgctattggacatgggctctggcactatcaaggttaaagcc
acccagaaaaaggtgaacgatggagattggtatcatgtggatatacagcgtgatggaaga
tcaggtaccatatctgtaaacagtcgtcgcaccccatttactgccagcggtgaaagtgag
attcttgatttagagggtgacatgtacttaggtggtttgccagaaaaccgagcagggctc
atcttgcccacagagttgtggactgcaatgctcaactatggctatgtgggatgcatcaga
gacctgtttattgatggccgaagcaaagatataaggcagatagcagaggagcaaaacggt
gccggaataaagccatcatgttccaagatcacctctaaacagtgtgaaagttatccatgt
aaaaacaatgcagtatgcaaagaaggctggaatagattcatctgtgattgcactggcact
ggctcctggtccagaacctgtgaaagggaggcctccattctcagctatgatggtagcatg
tacatgaaggttgtgatgcccatggtcatgcatacagaggctgaggatgtatccttgcgc
ttcatgtctcaacgggcatatggcctgctcatggcaaccacatcaagggagtcagcagac
acactaaggcttgaacttgatggaggacgcgtgaaattgactgttaatttagactgtatc
aggataaactgtaactccagcaaaggaccggaaacgctgtatgctggacaaaaactcaat
gataatgaatggcatatagtccgtgtggttcgacggggtaaaagcttgaagctcacggtt
gacgatgacactgctgaaggtcaaatggtgggagatcacactcgcctggaattgcacaat
atagagacagggattatgacggagaggcgctacatttcagtcatcccttccagttttatt
gggcaccttcagagcctgatgttcaacggaatgttatatattgacctttgcaaaaatggt
gacattgatttctgtgaactaaatgccaggtttggaatgaggtcaatcatagctgatcca
gtcacatttaagtccaagagcagttaccttagcttggctacacttcaggcctacacttcc
atgcacctcttcttccagttcaaaacaaccactccagatggattcattctctttaacagt
ggagatggcaatgatttcatcgctgtagagctagtaaaagggtatattcactatgttttc
gatctggggaatggtcctaatgtgatcaaaggaaacagtgacaaagcactgcatgacaat
cagtggcacaatgttgtgatcaccagggacaacagcaacactcacacactcaaggtggat
gccaaggctgtcacacaggttatcaatggtgccaaaaacctggacctgaaaggtgatctc
tacattgctgggctggcacagggcatgtacagcaaccttcctaaactcgtggcctcccga
gatgggtttcaggggtgtttggcatccgtggatctgaatggccgtctcccagacctgatc
aatgatgctttgtaccgcagcgggcagattgagcgtggatgtgaagttgagttcaccaaa
gctgacctacaaggtcccagtaccacctgccaagaggactcctgtgcgaacatgggcatc
tgcatacagcaatgggagaacttcacatgtgactgctccatgacatcatatgctggcaac
cagtgcaatgaccctggggctacatacatctttggcaaagggggagggctcataagatac
acatggccagccaatgacagaccaagtactcgcactgaccgccttgcagttggcttcagc
acatccctgaaggatgggatcctggtacggattgacagcgctgcgggccttggggatttt
cttcagctacatattgagcaaggcaagattggagtcacatttaacatcggaactatagat
atcagcatccaggaaaccagcaccccagtgaatgatgggaaatatcacgtagtacgtttc
acaagaaatggtgggaatgcaacacttcaggtggacaactggccaataaatgaacactat
ccaacaggcagcagtgattatgagcgtcttcaaatggtaaataagaaaatcccattcaaa
tatacccggccggtagaggagtggctacaagagaaaggccggcagctaaccatcttcaat
acccaggctacaataacaattggagggaatgacagaaagcgtccattccagggtcagtta
tctgggctctactacaatggccttaaggttctcaacatggcagcagaaaacaacatcaac
attaaaataaacggcagtgtaaggttggtgggtgatgtgccctctgtcctgggatcaaca
acaacttccatgcctctagaaatgtccacaaccttcatagagaccaccaccacaatgtca
acaactacaacccgaaagcatcgatctccacctaccattcagactacagatgacattgtt
tcctctgcggagtgctccagcgatgatgaggaccttgatgagtgtgacacaggtcatcca
ggtgggataggaggtgaattagtaatccctgtacttgtagaagattccttagaaatccct
cctatagctactcgtgcacccttcatcaccctcccccctacctttcgtcccctccttacc
attattgagaccaccaaagattccctgtccatgacctctgaggcggggttaccttgcttg
tcggaccaaggcagcgatgattgtgatgatgatggcttggtgatatctgggtatggctca
ggggaagcttttgactctaacctgccccctactgatgatgaagatttttacaccaccttc
tccctggtaacagataagatcatgtctacgtcggcctttgaaggtggctacaaagcacaa
gcgcccaagtgggagtccaaggactttagacctaacaaagccttcgaatctggtaggact
actaccacgtctttgtcccctgagctgatccgcaccacaacttcttccacgcccgaaatg
gtacccaaattgccagcaggcaaaatgaataaccgagagcttaagccccagccagacata
gtgttgcttccattgcccactgcctatgagctagacagcacaaagctaaggagcccatta
ataacctccccaatgttccgtaatgtacccacagcaaaccccacggagccaggcatcaaa
cgggttccgggggcctcagaggtggttcgtgaatctagcagcaccactggaatggtcgtc
ggaatagttgctgcagctgctttgtgcatcttaattctcctctatgccatgtataaatac
agaaacagggacgaaggatcttaccaggttgatgaaactagaaattacataagcaattca
gcacagacaaatggcgctgttttgaaggagaaacagcaaagtgcaaaaagtagcaacaag
aaacagaaaaacaaggacaaagaatattatgtgtaa
DBGET
integrated database retrieval system