Acipenser ruthenus (sterlet): 117417862
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Entry
117417862 CDS
T07327
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117417862
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Cadherin related
117417862
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
GAT
Motif
Other DBs
NCBI-GeneID:
117417862
NCBI-ProteinID:
XP_033886141
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Position
13:11757009..11771328
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AA seq
865 aa
AA seq
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MKKIKKVDISLFFTFVHVCQAQADYAPYFFDNGPNSKNGNMALFSIPEDTAIGTQLYILN
GTDPEGDPVTFGIAFEPGFKDYFKVDSQTGIVTLIEELDREKQDEVEALISISDGLNKVV
EKVRILVTDANDERPEFGNMSFNVNVPEDTPSGRSIFQTQAVDRDNGSGGSVTYYLQNSH
NTTFAIDRHNGVLCIKTGEALDYEKSRMHFVTVVAKDGGGKFKGKYQVLSSSATVTINVV
DVQDTPPSFVGLPYYGYVYEDTLSGSEVFTVVANDGDLGNPNAIHYSIVSGSDDSFIINN
TSGSIMVLDYPIHLKKVLYELKIQASEVSPEGDVVAHAFSIVTIRVVDLNNHPPTFYGEN
GPQNKFELTMYEHPPEGEILRGLKITVNDSDQGANAKFSLRLVGPRGIFRVVPQTVLNEA
QVTVIVDNSEAIDYEKYQFLSFKLLAVEIDTPEKFSSTADIVIHLLDTNDNIPWFSIDYY
IARIPENSPGGSNVVSVTATDPDSGLWGEVKYSIYGSGSDLFLIHPSTGNIYTQPWTTLD
TELKSKYNFYVKAEDTEGKYSLAEVFVTVLDMNDHSPEFNENILEKTMIIGAPVKIKAID
DDAEEPNNVVEYSIMQSDPDNIFDINIDTGEIKLKSYIKSMDIVQNITKQKDCKWSVVVQ
AKDRGSPSFSTTAVVKIDITEATQLKGPMAAFLFQSRDNPMKALGVLAGVICVMVLLTVL
ISTAMFMRNKTNNRIMPARHIIKKRPKDYRSRTVRTGWLIFKCSNSPSEKFVAEDPEQNR
ENLNCNKNMQPTAPLPCAPALPPPALYLPKQNKQEWSVPTVSGSVASKSKRQSRENNSPN
VSAALMSELKMKLQRKMMESNTSHY
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagataaagaaagttgatatttcactcttcttcacttttgtgcacgtctgtcag
gctcaggcagactatgccccctattttttcgataatgggcccaattctaagaatgggaat
atggcattattcagcattccagaagacacagccattggcacgcaattatatattctaaat
ggaactgacccagaaggggatccagtgacttttggcatagcttttgaaccagggttcaaa
gattactttaaagtggattcacagactggaattgtaactttaatagaagaactcgacaga
gaaaagcaggatgaagtggaagctctcatcagtatttcagatggtctgaataaggtggtt
gaaaaagtaagaatattagtgacagatgccaatgatgaaagaccagagtttgggaacatg
tcttttaatgtcaatgtccctgaggatactccgtcaggaagaagtatatttcaaactcag
gcagtggatcgagacaacggttctggaggaagtgtcacatattatctacagaatagccat
aataccacatttgccattgacagacacaatggagtgctttgcattaaaacgggagaagca
ctagattatgaaaaatcaagaatgcattttgttacagtagtagccaaggatggtggtgga
aaattcaagggaaaatatcaggtgctgtcttcttcagctactgtaacaatcaatgtggta
gatgttcaggacaccccaccttcctttgttggcttgccttattatggctatgtatacgag
gacacattatcaggatcagaagtctttacagtagtagccaatgatggagaccttggaaac
cctaatgctatccattattctatcgtcagtggaagtgatgattcattcattataaataac
acaagtggatcaataatggttcttgattatccgatccatctcaagaaggtgttatatgaa
cttaaaatccaggcttcagaagtaagcccagaaggcgatgtggttgcgcatgcattttca
attgtaactattcgagttgtggacttgaacaaccaccccccaacattctatggagaaaat
ggccctcaaaacaagtttgaacttactatgtatgaacatccacctgaaggagagatactg
agggggttaaaaataaccgtcaatgactctgatcagggagccaatgctaaattcagcctc
aggctggtgggtccacggggcatcttcagagttgtcccacaaacagtactgaatgaagca
caagtcacagtaatagtggacaattctgaagctatagactatgagaagtaccagttctta
tccttcaagcttcttgctgttgaaatcgatactcctgaaaaattcagttcgactgctgat
attgttatccatctgctggatacaaatgacaacattccctggttctctatagactattac
atcgccagaattcccgaaaactcacccggtggctccaatgtggtctctgtaacagctaca
gatcctgattctggcctgtggggtgaggtcaaatattccatctacggttctggatcggat
ctgtttcttattcatccatcaacaggaaacatctatacacagccatggacaacactagac
acagagctgaaatccaagtacaatttttatgtgaaggcagaagatacagaagggaaatat
agcttggctgaggtctttgtaacagttctggacatgaatgaccactctcctgagtttaac
gaaaacattcttgagaagactatgattattggggcaccagtgaaaataaaggcaatagat
gacgatgcagaggagcctaacaatgtcgttgaatactccataatgcaatcagatccagat
aatatttttgacataaacatagacactggagagatcaagctgaaatcttacatcaagtca
atggacattgttcagaacattacaaagcaaaaggattgcaagtggtcggtggtggtccag
gctaaagacagaggctcaccatccttcagcaccactgctgtggtgaagattgacatcaca
gaggcgactcagctcaaggggcctatggcagcctttttatttcaaagtagggataatccc
atgaaagccctaggcgtgctcgctggtgtcatttgcgttatggtactcctaacagtcttg
atctccactgcaatgttcatgcgcaacaaaacaaacaacaggatcatgcctgcccggcac
atcattaaaaagaggcccaaagactatcgctcgaggacggtcaggaccgggtggttaata
ttcaaatgctccaacagcccttccgagaagtttgtcgctgaggatccggagcagaacagg
gagaatctgaactgcaacaagaacatgcagccgacagcgccgctcccttgtgcccctgcc
ttgcccccaccggccctatatctgcccaaacaaaacaagcaagagtggagcgtccctaca
gtgtcagggtctgtggcatccaaatccaagaggcagtcacgcgaaaacaacagccccaat
gtcagcgctgcgctgatgtctgagctcaagatgaagctgcagagaaagatgatggagagc
aacacttctcactattaa
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