Acipenser ruthenus (sterlet): 117417947
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Entry
117417947 CDS
T07327
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117417947
Membrane trafficking [BR:
arut04131
]
Endocytosis
Others
Others
117417947
Endosome - Lysosome transport
117417947
Endosome - Golgi transport
117417947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
117417947
NCBI-ProteinID:
XP_033886266
LinkDB
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Position
13:complement(2211816..2325464)
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AA seq
1248 aa
AA seq
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MERGAGSCPGLHSALWTCFLISACFLIIAKGEITCTSCPSPATQHRRGLLLDLQMDAGKS
GTRFLMKRLERSVEPYYSGLGVAVASGVGGDVKAMGSGVIIPQSIAEPASSKVTGPSIEE
AGGKGNVVRVREMTMDVEKPGDSGQNGGEAISDRGTFIHTDGKNVTYGDKLLRAKRSKSS
TPTLDGQRLSRAELKWTRDEGTNSKQEELKLTSTTFALTGDSAHNQAMVHWSGHNSSVIL
ILTKLYDFNLGSVTESSLWRSTDYGATYEKLNDKVGLKTVLSYLYVCPSNKRKIMLLSDP
EIESSLLISSDEGASYQKFRLNFYILSLLFHPRHEDWILAYSHDQKLYSSIDFGRKWHLV
HENVNPNRFYWSVIGLDKESDLIHMEARTADGHARYISCRIQACSELDRNHPFPGFIDTS
SLVVQDDYMFIQVTTGGRATYYVSYRREPFIQIKLPKYALPKDMHIISTDENQVFAAVQE
WYQNDTYNLYISETRGIYFTLALEHVKTSRGLEGNIMIDLYEVAGIKGMFLANKKLEGQV
KTYITYNKGRDWRLLKAPVTDLRGNPIHCVLPFCSLHLHLQVSENPYTSGSISSKASAPG
IIVATGNIGAELTFSDVGMFTSTDAGNSWRQIFEEEHSIWFLDKGGALIAVKQTSLPIRQ
LAISFDEGKQWSKYSFTLAPLFVDGVLVEPGIESQIMTFFGHFSHRSEWQLVKIDYKSIF
SRRCTEGDYQTWHLNNQGEPCVMGEKQIYMKRRPGNHCMLGKDYSRMLSSEPCICAASDF
ECDYGYERRGDGKCLPAFWFNPTTVSRSCSLGQSYLNSTGYRKVVSNNCTAGVKEIYTAR
KQQCPRRAPRGLHVVTSDGKLVSSQGSNVTFLVFLEDGDSLRTNIQLDFGDGIAVSYSNL
SLIEGGIKHVYKTAGIFRVCALAENSLGSDSAALYLHITCPVEHIHLSVPFVAIKKKEVN
LTAVVWPSLSRTITYFWWFENNTEPVITLEGSVSYTFTVEGMNTVTVQVSAGDAILQDTK
TIAVHEFFKSLLLSFSPNLDEYNPDIPEWRDDVSKVIKKALVQVSDFPEEQLLVAVLPGI
PTAAELFLLPHNNLTEGRKKNEADLEQISGILVSALNQNVVEFELKPGVGVIVYITQLTL
APLVDSSPRLSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHAKEQEMIGSVS
ETTPTLILSEFTSREQQLEKELETRVIGGTATVGESECTREIPNCTSV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggctggctcctgcccaggcttgcactccgctctgtggacctgctttctg
atctccgcttgttttctgattattgccaagggtgagataacttgcacatcatgcccatcg
ccggcgacacagcaccggaggggtctgttactggacctgcagatggacgcggggaagtcg
gggacaagatttctaatgaagcgtttggaaaggtctgtggagccttattattctgggcta
ggagttgcggttgcttcgggtgttggcggggatgtaaaggcaatgggcagtggcgtgata
ataccccagtccatagcagaaccagctagttccaaagtgacaggtcctagtatagaagag
gccgggggcaagggaaatgtggtcagggtgcgagagatgaccatggatgtggagaaaccg
ggtgattcagggcagaatggtggagaagcaatttcagataggggcacatttatacataca
gacggcaagaatgtgacatacggtgacaaattgctgagggcaaagcggagcaaatccagc
accccaacactggacggacaaagactaagcagagcagagctgaaatggaccagagatgaa
gggaccaactccaagcaggaagagttgaaacttaccagcaccaccttcgcattgacaggg
gattctgctcataaccaagccatggtgcactggtcaggacacaacagcagtgtcattctc
atcctgacgaagctctatgactttaacctgggaagtgtcactgagagctctttgtggaga
tcaactgactatggggctacttatgaaaagctgaacgacaaagtgggcctgaagactgtc
ttgagctatctgtacgtctgcccaagcaataaaagaaagataatgctactgagtgatcca
gagattgaaagcagtctgctcatcagttcagatgaaggggccagctatcagaaattccgt
ctcaacttttacattctgagcctcctgtttcatccaagacatgaagactggattctggct
tacagccatgaccaaaagttatacagttctatagattttggaaggaaatggcatctggta
catgagaatgtcaaccccaacagattctattggtcagtaatcggcttagacaaggagtca
gatctcatacacatggaggcacggactgcggatgggcacgctcgatacatttcctgcagg
attcaagcctgttctgagctggacagaaaccatcctttccctggattcattgacaccagt
tccctcgtggttcaggatgattatatgttcattcaggttacaacaggtgggagggccact
tactatgtgtcctatcgaagagagcctttcattcaaatcaaattacctaaatatgcactg
cctaaggacatgcacattatcagtacggatgagaaccaggtgtttgcggctgtgcaagag
tggtaccagaatgacacctataacctgtacatatcagagacccgagggatctacttcact
cttgcattggagcatgtaaagactagcagaggactggaggggaacatcatgattgacctc
tatgaggtagcagggataaaaggaatgttccttgcaaacaagaagcttgaaggccaagtg
aagacctacatcacgtacaataaagggagggactggcgtctgctgaaggcacctgtcaca
gacctgaggggaaaccccatccattgtgttttgccattttgttccctgcacctacacttg
caggtttcagagaatccatatacttctggaagcatctcaagcaaggcgtctgctcctggg
attatagtggctacaggcaatataggcgctgagcttaccttcagcgatgttggaatgttc
acatccactgatgctgggaacagctggcgacagatttttgaggaagaacacagtatctgg
ttcctggataagggtggagctctgattgctgttaaacagacatcactgcctatcagacaa
ctggcgataagctttgatgaggggaaacagtggagcaaatacagctttaccttggcccca
ctgtttgtagatggagtgctggtggagcctggaatagagagtcagataatgacgtttttc
ggacacttcagtcatcgctctgagtggcagctcgttaagattgactacaagtctatcttc
agtaggaggtgcacggagggagactatcagacctggcatctaaacaaccaaggtgaacct
tgtgtaatgggagaaaagcagatctacatgaaacgcaggccaggaaaccactgcatgctg
ggaaaggactactccaggatgttgtcctcagagccgtgtatctgcgctgcctctgatttt
gaatgtgattatgggtatgagcgtcgtggagatgggaagtgtttgcctgccttctggttc
aacccaactactgtatcccgaagctgcagccttggacagagttatctcaacagcaccggg
taccggaaggtggtgtccaataactgcactgcaggggtgaaggagatctacacagccagg
aagcagcaatgccctcgccgcgctccccggggcctccatgttgtcactagcgatggcaag
ctggtctcttcgcaggggagcaatgttaccttccttgtctttttggaggacggcgactct
cttaggacaaatattcagttagattttggagatggcattgcagtttcctactccaatctc
agcctgatagagggtgggatcaaacatgtttacaagactgctggcatattccgggtgtgc
gctctggcagaaaacagcctggggtcagacagcgctgccctttacctgcacataacatgt
ccagtggaacacattcatctttctgtcccatttgttgccataaagaagaaagaagtcaac
ctcactgctgtggtgtggcccagtctttccagaacaattacttatttctggtggtttgaa
aacaatactgagccagtgatcaccctggagggaagtgtctcctataccttcacggtggag
ggaatgaacactgtcacagtgcaggtctctgctggggatgcaatactgcaggacacaaag
acaatcgcagtccatgaattcttcaagtctctgctgttgtccttttctcccaatcttgat
gagtataaccctgatatccctgaatggagagacgatgtcagtaaagtcattaagaaggct
cttgtacaagtgtctgactttccagaagagcagcttttagttgctgtacttcctggcatc
cccactgctgctgagctttttcttttaccacataacaacctaacagaggggaggaaaaag
aacgaggctgatttagagcaaatttcaggaattctggtcagtgccctgaatcaaaacgtg
gtggagtttgagctgaagcctggagttggagtgattgtttatattacacagctgacgtta
gctccccttgtcgactccagtccaagactcagcagttctgccatgttgatgttgctttca
gttgtatttctgggtttagcagtttttttaatctacaagtttaaaagaaaaatcccctgg
ataaatatatatgcggaggtcaaccatgcgaaagaacaagagatgattggctctgtcagc
gagaccacgcccacacttatactaagtgagttcacgagtcgcgagcaacagctggaaaaa
gaactagaaaccagggtcataggaggaactgcaacagttggtgagagcgaatgcacaagg
gaaattccaaactgcactagcgtttaa
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