Acipenser ruthenus (sterlet): 117417974
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Entry
117417974 CDS
T07327
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117417974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117417974
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
RNases
117417974
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PAD_M
Motif
Other DBs
NCBI-GeneID:
117417974
NCBI-ProteinID:
XP_034781709
LinkDB
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Position
13:complement(36926296..36935919)
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AA seq
791 aa
AA seq
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MADPARVVCALKRASVSSLEGCEPKTRKLSATADEIIDESSHHAPHTKGFPRLSVPSCQP
LCAISHEQVCELLQFAALGKDHGVKQPSWCHLRHQRRLSGVSVIVLQGQSVSTSDKKAYY
WSWGTSGEGALLAIRCSLPPPPPDFLSTVLAARGAASADRTREQPTAQDSLCSSGTVRLH
CEPGSDKPGLTRYLLSREDRERYNFPREGAPGCELYVSTECDGQVTDSSPLLGLDCEMCL
TEKGKELTRVSLVDGAGRCIMDELVKPENRILDYLTRFSGITKVLLNPVRTRLQDVQARL
KQLLPRDAVLVGHSLDCDLRALQMTHPFVIDSSLLFMREFGLRFKLKFLAEAVLGRQIQC
EDREGHDPTEDARAALELAQYFIREGPDQVAQLSLEDLLKRQSDGNKQVNGSSLAGSCKP
LNGAGNGIHTPRRSSLLDNLHAAGLSGIHIVRKGQEDRIACPKRWPRIEYSCETELLAKA
SGEIPASFFSMVQCSSFSEYAQSNPSLWGASRRQMQGRLAEMCTVYAGPFPRDFTLKSAR
RLLRRCGPIRSMKLISGSHKPYVAVEYEVLEAAQLAVEVLNGSELEGSFIKVQRPVTETA
VDWDDLFHALERDALNEKLVYVAGLSKSLTQEALLQRFREFGHVESVLLPRDPSGGKHRR
YGFIKFQGSLSATAALSSEIVLKRRRLLKCRAVTPFHLHTWSSQLSCRALEHTASQHSPA
GGCAQQEPPGTQEDEVKELMMRLDRTVERLYSEALPSGTLCVLLLPGESSDDGNLPGLLM
AGIKEDSSDVG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccagcgcgggtcgtgtgcgcactgaagagagccagtgtgtcgagcctggag
ggctgtgaaccaaaaacacgaaagctgagcgcgaccgcggatgaaatcatcgatgaatcc
tcccatcatgcaccgcacacgaagggcttccctcggctctctgtgccttcctgccagcct
ctgtgtgccatcagccacgagcaggtgtgtgagctgctgcagtttgctgccctgggtaaa
gaccatggtgtgaaacagcccagctggtgtcatcttcgccatcagagacggctctcggga
gtcagtgtgattgtcttacaaggtcagtctgtgtccacttctgacaagaaagcttactat
tggagctggggaacatctggggagggagcacttctagctataagatgcagcctgcctccc
ccgcctcctgattttctctccacagtgctggctgctcggggcgctgcttcagcagacagg
acacgggagcagcccacagcacaggactccttgtgctcctctgggacggtccggctgcac
tgtgagcctggctcagacaagcccgggctcacccgctatctgctgagcagagaggacagg
gaacggtacaacttcccccgggaaggggctccaggctgtgaactctacgtttccaccgag
tgcgatggccaggttacggacagcagcccactcctcggtcttgactgtgaaatgtgcctg
acggagaaggggaaggagctgactcgggtctcgcttgtggatggggcaggacgctgcatc
atggacgagctcgtcaaaccagagaacaggatcctggactatctcaccaggttctccgga
atcacgaaggtgctgctgaacccagtaagaacgcggcttcaggacgtccaggccaggctg
aagcagctcctgccccgcgacgctgtgcttgtgggccactccctggactgcgacctgcgg
gcgttgcagatgacccaccccttcgtcatcgacagctccttgttgttcatgcgggaattc
ggcctccgcttcaaactgaagttcctcgcagaggctgtgctgggccggcagatccagtgc
gaggacagggagggccacgatcccacagaggatgcacgggctgcgctggaactggcccag
tacttcatcagagagggacccgaccaggttgcacagctgagcttagaggatttactgaag
aggcagagtgacggcaataagcaagtaaatgggtcctcgctggctggttcatgcaagccg
ctcaacggagcagggaatggaatccacactccgcgacgcagcagtcttctagataatctg
catgcggcgggtttgtcaggaattcacattgtcagaaaagggcaggaggatagaatcgct
tgtccaaaaaggtggcctaggatagagtacagctgcgagacagagcttctggcaaaggct
agcggtgaaatcccagccagcttcttcagcatggtccagtgttcttccttctctgaatac
gctcagtcgaacccgagtctgtggggcgcttctcggcgacagatgcagggcagactggcg
gagatgtgcacagtctacgctgggccctttcccagggatttcacactgaagtctgccagg
aggctgctgcgacgctgtgggcccattcgatccatgaagctgatcagcggcagccacaag
ccctatgtagccgttgagtatgaggtcctggaagcagctcagctggccgtggaggtcctc
aatggttcggagttggagggcagctttataaaggtgcagaggcccgttacagagacagcg
gtggactgggacgatctcttccatgccctggagagagacgcgctcaacgagaagctggtt
tacgtggcaggattgtcgaagagcctgacccaggaggccctgctccagcgcttccgtgaa
ttcggacacgtcgagtccgttctcctgccccgggatccttcgggaggaaagcaccggaga
tatggatttatcaagttccagggttccctcagtgccacagctgccttgtcttccgagatc
gttctgaaaagacgaagacttctgaagtgccgtgcggtgactcccttccaccttcacacg
tggagcagccagctgtcctgcagggccctggagcacacagcttcccagcacagcccggcg
ggaggctgtgcccagcaggaaccgccaggcactcaggaggatgaggttaaagagctgatg
atgagattggaccggacggtggagagactgtacagcgaagctctccccagtggaacactg
tgtgtactgctgcttcctggagagagcagcgatgatgggaatctgccaggtctgctcatg
gctgggattaaagaggattcctctgacgtgggatga
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