KEGG   Acipenser ruthenus (sterlet): 117418267
Entry
117418267         CDS       T07327                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arut03036]
    117418267
   03400 DNA repair and recombination proteins [BR:arut03400]
    117418267
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117418267
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117418267
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_2
Other DBs
NCBI-GeneID: 117418267
NCBI-ProteinID: XP_033887032
LinkDB
Position
13:complement(8736457..8748861)
AA seq 1023 aa
MVGDGALLLGLVEEFVTGLQDSKAADTATGVKKGQFAVLELVEALGSSLTSSEPRTRGRG
IQLLSQVLQQCCTSLSEKEVQVLTAFYENRLKDHYVITPHVLQGLKALTLCPVLPTGLAI
SILKSLFQDVHVQSLMQTDRSCVYNILINLMESREEELKGLGADFVFGFVQAIDGEKDPR
NLLLAFQIAQNILYRNYELGSFTEELFEVTSCYFPIDFNPPPNDPHGISREELILSLRAV
LSGTPRFAEFLLPLLIEKLDSDVQSSKLDSLQTLAACAAGYGHKELKEFLPSLWSSVRRE
VFQTASEKVESAGLSALRSITACLSCSVLDSDSEDSLNTFLDLVLKDCQHHLCEPDLKLV
WPSTKLLQTAASASYRASYKITAAVVPLLLEQYNNHTQNAQRRTLVEVLQGFIQPPRGSH
TEEGDENPLTGYRQPLCALVFSALTESSPALQTAAIRTLTALGTQPGLLSGEDIDLAADH
LTRLVLREEEPQTCSAAMEAAGSLARLHPTAFASRMVPALKQEILSEAMEECEGRPTAQS
QQALRQRSLKTLSTVSTHPSLVQETVPILLQALSVSHKGSSSFELEEVVSACRSLQQIAE
LAKDSEESGRYFHQTVIPRLLGLAVQASLQGGGAPNPLTEERVLSAMVPIFSTACGYLHT
QLAAHTASLVLSLFLDGDTSFLPENNIPQQFHLLKERSNGWPETQLVCLLMACVCSLPKS
MEVPNTDRLLSELEELSCSCVHPFTHTSAAKCFAGLVNKHPAGEQLDTILKRSVKRIESG
LSSDSPNRIQVFTLLLWVSKALLLRYHPLSTTLTDKLLSLLVDRELGSLAADGFALLMND
STDVLNRACHADVRMMYRQRFFTETAPKLVLGFNCAPEERKSSYLKALSHILNSLPRQVQ
ITELPSLLPLLLEALCCPDHGVQLSTISCLHPLLLDTPQVMTSHLETLLSRLLGLTASPA
MKVRVISLQCLKALTRLPEHVVLPSRPRMLRALAVPLGDKKRLVRREAVLARGEWFLLGS
PGR
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggttggggacggagccctgctgctgggtttggtggaggaatttgtaaccggactgcag
gatagtaaggccgctgacacagcaacaggagtgaagaaaggacagtttgccgtgttagag
ctggtggaagcattggggtcaagtttaacaagctctgagcctcgaactaggggccgtggg
atccagctcctctcccaggtgctgcagcaatgctgtaccagcctatcggagaaagaagtt
caggtcctgacagctttttatgaaaacagactaaaggaccattatgtgataacgcctcat
gtcttgcaggggctcaaggccctgactctgtgccctgtgttgcccactggactggccatc
tctatcttgaagtctctgtttcaggatgtccatgtgcagtctctgatgcagacagaccgg
tcctgtgtttacaacatcctgatcaacttgatggagtctcgtgaggaggagctaaagggt
ctgggtgcagattttgtattcggttttgtccaagcgatagatggtgagaaggaccccagg
aacctgctgctggccttccagattgcccaaaatattctgtacaggaactatgagctggga
agttttacagaggagctgtttgaagtgacttcttgctatttccccattgatttcaatccg
cctccaaacgacccccatggaatcagtcgagaggagctgattctgagccttagggcagtg
ctgtctggcacgcccaggttcgctgagttcctgctgccgctgctgatcgagaagctggat
tcagatgtacagagctctaagctagactccctgcagacgctggcagcctgcgccgctggc
tacggacacaaagagctgaaagaattcctgccgagtctctggtcatcagttcgcagagag
gtgttccagacagctagtgagaaggtggagagtgccggcctctctgccctgcgctccatc
acagcctgcctctcttgctccgtccttgactctgattcagaggactcgctcaacaccttc
ctcgacttggttctcaaagattgccaacaccacctctgtgagccagacctgaagttggtt
tggccgagtacaaaactcctgcagactgctgccagcgcctcctacagggcgagttataaa
ataacagctgcagtggtgccattgctgctggagcagtacaacaaccacacacagaatgct
cagcggcgcaccctggtggaagtgttacaggggttcatccagcccccacgggggagccac
actgaggagggagatgaaaaccctcttactggttaccggcagcccctgtgtgccctggtg
ttctcagctctcacagagtcaagccccgcactgcagactgcagccattcggaccctgact
gccctggggacccagccaggcctgctctctggggaggatattgatcttgctgctgatcac
ctgactcgactggtcctgcgggaggaggagccacagacctgctccgcagcgatggaagct
gctggctctctggctcgtctgcaccccaccgccttcgcctccaggatggtcccggctcta
aaacaagagatcttatcggaagcaatggaggagtgcgagggccgccccactgcacagtcc
cagcaggcactgcggcagcgcagtctgaaaactctgtcgacggtatcaactcaccccagc
cttgtccaggagactgtgcctatcctactgcaggccctcagcgtctcccacaaaggaagt
tccagttttgagctggaggaagtggtgtctgcatgtcgtagcctacagcaaatcgcagag
cttgccaaagacagtgaggagagcggccgctacttccaccagactgtcatcccacgcttg
ctggggctggcagtacaggcctccctacagggtggaggtgccccaaaccccctgacagag
gagagggtgctgtctgctatggttcctatcttcagtactgcctgtggctaccttcacaca
cagctggctgcccacactgcatccctggttctttcccttttcttggatggagatacctcc
ttcctgcctgagaataacatcccacagcaattccacctgctgaaggagcgatctaacggc
tggccagagactcaactggtgtgtctcctgatggcgtgtgtctgttcattgcctaagagc
atggaagttcccaatactgaccgcctcttgagcgaattggaggagctgagctgttcctgt
gtccaccccttcacccacacatcggcagcaaagtgtttcgctggactggtcaacaaacac
ccagcaggggagcagctggacactattttgaagcgatctgtgaagaggattgagtctgga
ctgagcagtgactcgccaaacagaatacaggttttcactctgctgctgtgggtgtccaag
gcactcctcctgaggtaccatcccctatccacaacacttactgataagctcctgtctctc
ctggtggacagagagctgggctccctggctgccgatggctttgcccttctgatgaatgac
tcgacggatgttttaaatcgagcgtgccatgctgacgtgcgcatgatgtaccggcagaga
ttcttcactgagacggcacccaaattagttctggggttcaattgcgcccctgaagaaagg
aaatccagctacttgaaggccctgtcccacatcctcaacagcttgcccaggcaggtccag
atcacagagctaccctctctgctgcccctcctattggaggcattgtgttgtccagaccat
ggtgtccagttgtcaaccatatcatgcctacaccccctcctcctggacaccccgcaagtc
atgacctcacacctggagaccctcctaagccgactcctggggctgaccgccagcccagct
atgaaagtccgggtcatatctctgcagtgcttgaaggcactaaccaggctccctgagcat
gtggtgctgccgtcccgcccgcggatgctccgtgctctggctgtgcctctgggtgataag
aagcggctggtgaggagggaggcagtgcttgcgcgaggggaatggtttttgctgggaagc
ccaggaaggtga

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