Acipenser ruthenus (sterlet): 117418455
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Entry
117418455 CDS
T07327
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117418455
03036 Chromosome and associated proteins [BR:
arut03036
]
117418455
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117418455
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Helicases
117418455
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117418455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Gly_acyl_tr_C
Motif
Other DBs
NCBI-GeneID:
117418455
NCBI-ProteinID:
XP_033887422
LinkDB
All DBs
Position
13:17472883..17494047
Genome browser
AA seq
707 aa
AA seq
DB search
MPGKIRFDSDEMEMEDSLDSVTVEKKKHKKHKKEKKSKNEEKPKKKKQAAEEEQPDDECD
PPTPKKKKKDRETSNGESGKKGRPQETNGSLSNGTPLMKSPQASEESNAESDIEKEKEII
PELTPEQKEGAFSNFRISKETINLLKGRGVTYLFDIQSRTFNSVYDGKDVVAQARTGTGK
TFSFAIPLIEKLQSDPVERKKGRSPKVLVLTPTRELAIQVSRDFKDVTRKLSVACFYGGT
AYNGQFDSIRNGIDVLVGTPGRIKDHLQNNKLDLSKVKHVVLDEVDQMLDMGFAEQVEEI
LGASYEKDSEDNPQTLLFSATCPHWVYDVAKKYMRPKYEQVDLIGKKTQKAATTVEHLAV
SCHWSQRAAVIGDVVRVYSGSHGRTIVFCETKKEANELAMNASIKQDTQCLHGDIPQKQR
EVTLKGFRNGSFEVLVATNVAARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRPGV
CICFFQRREEEQLRFVEQRAGITFRRVGVPTATDIIKASSKDAVRFLDSVPATAIEYFRV
AAEKLVEERGAVEALAAALAHISGATAIEQRSLLNSDAGYVTMTCTCSVEMHNIGYAWKA
LKEQLGEEVDQKVQRMNFLKGKTGVCFDVPADCVKEYQEKWSDSRRWQLSVAAELPEREA
VMREGGSSFGRKPFGGGRGGGRGFNRNDRFNNNHRGQKRSFGRAFNY
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaagatccgctttgatagtgacgagatggaaatggaagacagtctggactcc
gttacagtagagaaaaagaaacacaagaagcataagaaggaaaagaaatccaagaacgaa
gagaaacccaagaaaaagaaacaggctgctgaggaagagcaacccgatgatgagtgtgat
ccacctactcccaaaaagaaaaagaaagatcgtgaaacatccaatggagagtccggaaag
aaagggagaccccaggaaaccaatggctccttaagcaacggaacacccctaatgaaatcg
ccccaggccagtgaagagtccaacgctgaatctgacattgaaaaagaaaaggaaataatt
ccagaactaacgccggaacagaaagaaggagccttctccaacttcagaatctccaaagag
accatcaatctattgaaaggacggggtgtgacgtacttgtttgacattcaatctcggacc
ttcaactctgtgtacgatgggaaggatgttgtagcccaagctcgcacagggactgggaag
accttctcctttgctattcccctgatcgagaaactccagtcagaccctgtggaaagaaag
aaggggagatcaccaaaggtcctggttctcaccccaacaagggagttggccattcaagtg
tccagggacttcaaagacgtcacacgaaagctttccgttgcctgcttttatggtggaact
gcctacaatggacagtttgatagcatccgtaatggaatcgatgtcttggtgggcactcct
ggtcgtattaaagaccacctccagaataacaagctggacctgtcaaaggtgaagcatgta
gtgctggatgaagtggaccagatgctggacatgggctttgctgaacaagtagaagaaatc
ttaggagcttcctatgaaaaggattccgaagacaacccacagaccctgctgttttctgca
acctgtccacattgggtgtatgatgtagccaaaaaatacatgcggcccaaatatgaacag
gttgacctcatcggcaaaaagacccaaaaggctgccaccactgttgaacacttggcggtt
tcatgccactggtcccagcgagcggcagttatcggagatgtcgtcagggtctacagtgga
agccacgggcggaccatcgtcttctgtgagaccaagaaagaagccaacgaactggcaatg
aatgcctccatcaaacaggacacccaatgtttgcatggagacattccacagaaacagaga
gaggtcacactgaagggcttcaggaatgggtcttttgaagtcctggttgctaccaatgta
gctgctcgtgggctggacattccagaggttgacctggttgtacagtgctctcctccaaag
gatgtggagtcctacatccatcgatctgggcgtacaggcagggcaggccgcccaggggtc
tgcatctgtttcttccagcgcagggaggaagagcagctgcgctttgtggagcagagagcc
ggcatcacatttaggagagttggtgttccaactgcaactgacattattaaggcctccagc
aaagacgcagtcaggtttttggattccgtccctgccactgctatagagtatttccgcgtg
gcggctgagaagctggtcgaggagcgaggggcagtggaggctttggctgctgccttggca
cacatctctggagccacagctattgaacagcgctccttgctgaactccgatgcgggctat
gtaacaatgacatgtacctgctctgtggaaatgcacaacattgggtatgcctggaaggct
ctaaaggaacagctgggtgaagaagttgaccagaaggtgcagagaatgaacttcttgaaa
ggaaagaccggtgtatgctttgatgtcccagctgattgtgtgaaggaatatcaggagaaa
tggagtgactccagacgctggcagctgtctgtagcagccgagcttcctgaacgggaagcg
gtgatgcgtgaaggaggctcaagtttcgggagaaagcctttcggcggtggtaggggtggg
ggaagaggtttcaacaggaatgacaggtttaacaacaaccacagaggccagaaaagaagc
tttggccgggcattcaattactaa
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