Acipenser ruthenus (sterlet): 117418596
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Entry
117418596 CDS
T07327
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04517
IgSF CAM signaling
arut04518
Integrin signaling
arut04520
Adherens junction
arut04810
Regulation of actin cytoskeleton
arut04820
Cytoskeleton in muscle cells
arut05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117418596
04518 Integrin signaling
117418596
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117418596
04520 Adherens junction
117418596
09142 Cell motility
04820 Cytoskeleton in muscle cells
117418596
04810 Regulation of actin cytoskeleton
117418596
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117418596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117418596
04147 Exosome [BR:
arut04147
]
117418596
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117418596
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117418596
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Mob_Pre
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
117418596
NCBI-ProteinID:
XP_034781998
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All DBs
Position
13:9541138..9576609
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AA seq
1138 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQLMKRDMPPAFIKVENACTKLVQAAHMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAIKIFVTTKSSKSQGVEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWANKDSEAMKRALALIDSKINQAKGWLRDPNAQSGDAGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSELRARGQGATPVAMQKAQQVSQGL
DLLSSKVENATRKLEAMTNSKQALAKNIDAAQNWLADPYGGPEGEEHVRGIMSEAKKIAD
LCEDPKEREDILRSLGEIAALTAKLSDLRRQGKGDTPEARALAKQIATTLQNLQSKTNRA
VANSRPVKAAVNLEGKIEQAQRWIDNPTIDDRGVGQAAMRGLVAEGRRLANAMLGPYRQE
LLGKCDRVEQLSAHLAELAARGEGESPQARAVAAQLQESLKDMKSKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPPGAPNREEVFDERAAYFEHHAAKLGGTAEKAAAVGTANKSTVEG
IQAAVKSSRELTPQVVSAARILLRNPGNQAAHEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EIVKAASDDLSKTISPMVMDAKAVAGNIQDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLDQLHLNDEPAPPKPPLPEGEVPPPRPPPPEEKDEEFPEEKAGEMVNQQMMV
AARQLHEEARKWSSKPDVNDEGNEAAEADVDIDDEDDADDVEFALPSDNEDDYETELFLM
PTDQTFNQPIMAAAKSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGVTGNKRALI
QCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGR
TNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWARKTPWYQ
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttccatacaaagacgatagagagtatcctggagccagtggctcagcagata
tcccacttggtgataatgcacgaagaaggggaggtggacggtaaagcgatcccggaccta
actgcacccgtagctgcagtgcaggcggctgtcagcaacctcgtccgggttgggaaagag
actgttcaaacaacagaggaccagctcatgaaaagagacatgccaccagcttttattaag
gttgagaatgcctgtactaagctggtccaggctgcccacatgctgaaagcagatccctac
tctgtacccgctcgtgattaccttattgatggatccaggggaattctctcagggacttca
gacttgcttttgactttcgatgaggctgaggttcgaaaaatcattcgtgtctgcaaaggt
attctggaatacctaactgtggctgaagtggtggagagcatggaagatttagtaacatac
actaaaaatctgggaccaggaatgacaaaaatggcaaaaatgattgacgagcgccagcag
gagctcacccatcaggaacaccgagtgatgctggtgaactccatgaacactgtgaaagag
ctcctgccagtgctaatctcagctattaaaatctttgtgacaacgaaaagttccaaaagc
cagggggttgaggaagctctgaagaaccgcaacttcaccgtggagaagatgagcactgaa
atcaatgagatcatccgcgtgctgcagctcacctcctgggatgaagatgcctgggctaac
aaagactcagaagcaatgaagagagctttggcacttattgactcgaagataaatcaggca
aaaggctggctgagagaccccaatgctcagtcaggtgatgctggtgaacaagccatccgg
cagattctagatgaggctggtaaagttggggagttgtgcgctggcaaagaaaggagagac
atcctgggaactgctaaaactctgggccagatgactgaccaagtgtctgaactgcgtgcc
agaggtcagggggccacccctgtggccatgcagaaggctcagcaggtctctcagggcctg
gatttgctgtcatcaaaggtagaaaatgctacccgaaaactggaggccatgaccaattcc
aaacaggcccttgccaagaacattgatgctgcacagaactggcttgcagacccctatggg
ggcccagagggagaggagcacgtccgtggaatcatgtctgaagcgaagaagattgcagac
ctgtgtgaggaccccaaggagagggaagacatcctgcgttcccttggggagatcgctgct
ttaacagccaagctctctgacttgagaaggcagggaaaaggtgacactcccgaggccagg
gccttagccaagcagattgccaccaccctgcagaacctgcagtccaagacaaaccgagcc
gtggccaacagcaggcctgtgaaggcagccgttaacctggaaggcaagattgagcaggcc
cagcgctggatagacaatcctaccattgatgaccgtggtgtgggccaggctgcaatgcgg
gggctggtggccgagggccgtcgccttgccaacgctatgctgggcccttaccggcaggag
ctccttggcaagtgtgatcgagtggagcagttaagtgcacacctggctgagctggcagcg
cgtggggagggagagagtccacaggcacgggctgttgcagctcagctccaggaatcccta
aaagacatgaaatcaaagatgcaggaagcaatgacccaggaggtttcggatatcttcagt
gacaccaccaccccaattaaactgctggctgtggctgccacggcgccccctggagcgcca
aacagggaagaggtgtttgatgagcgggcggcctacttcgaacatcatgctgccaaactc
ggaggaacagcagagaaggcagcagctgttggaacagctaataagagcactgtggagggg
atccaggctgctgtgaaatcatccagagagttaacaccgcaggtggtgtcagctgctcgt
atcttactgaggaatcctggtaaccaggctgcccatgaacattttgagaccatgaagaat
cagtggattgacaatgttgaaaaaatgacgggtttggtagatgaagccattgacacaaag
tccctattggacgcgtccgaagaagcaattaaaaaggacattgataagtgccgggtggct
atggccaatgtccagccccagatgcttgtcgctggcgccactagcattgcgcgccgggcc
aataggatcctgctggtagctaagcgggaggtggaaaactctgaagatcccaagttccgt
gaaattgtaaaggccgcctcagatgatctgagcaaaaccatctcccccatggtaatggat
gccaaggctgtagctgggaacatccaggatccaggtctccagaagagtttcctggactct
ggatacaggattctgggagcggtagccaaagtccgagaggccttccaaccacaggagcca
gacttccctccaccaccccctgaccttgatcagctgcatttgaatgatgagcctgcacct
cctaaaccccctctcccagagggtgaagtgcctccccccagacctccaccccctgaggag
aaggatgaggagttccctgaggaaaaggcaggcgagatggtcaaccagcaaatgatggtg
gcagccagacagctgcatgaagaagctaggaagtggtccagcaagcccgatgtgaatgat
gagggtaatgaagccgctgaggcggatgtagatatagatgatgaggatgatgcagatgat
gttgagttcgccctcccctcagacaatgaagatgattatgagaccgagctgttcttaatg
cccactgatcagacgtttaaccagcccattatggccgctgctaagtctttgcaccaagaa
gcacgcaagtggtccagtaagggaaatgacatcattggagcagcaaagcgaatggccctg
ttgatggcggaaatgtcccgtctagtgcgtggcgtcacaggaaacaagcgtgcccttatt
cagtgtgccaaggacatcgccaaggcatctgatgaggtcactcgactggccaaagaagtg
gcaaagcagtgcactgacaagcgaatccgaacaaaccttctgcaggtgtgtgaacgtatt
ccgacgattagcacacagctcaaaatcctctccactgtcaaagctaccatgttgggccgc
actaatatcagcgaggaagagtccgagcaggcgacagaaatgctcgttcacaatgcccag
aatctgatgcaatctgtcaaggagacagtgagagaagctgaagctgcttccatcaagatc
cgtacggatgctggattcaccctgcgctgggccagaaagactccctggtaccagtaa
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