Acipenser ruthenus (sterlet): 117419527
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Entry
117419527 CDS
T07327
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117419527
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117419527
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
117419527
NCBI-ProteinID:
XP_033888219
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Position
14:12414571..12430323
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AA seq
983 aa
AA seq
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MVQLSPSPVPCLSPTDQADDGKMTVKTEKKQGSPKSDVQFALTSLQLALAASTTTYQGYD
AYIEDGLICLKHKIRNIEKKKIKLEDYRQRRQEGQLLNQDQLDAVEKYDEVIHNLAFAKE
LQKTFSSLSQDLLKAQKKAVRREQVLKIETEKRRLRTILQVQYILQNLQEEHVRKDFRSG
LNGAPFLSARELDYLLKFSKLASLVRDEMMSLEDQMEQATSYLWELLEGGEKVVVGTTYK
HLKAQMAKLMDCGYFDHIPVPQSKMLEEVKEVHKLVEVAKTEPLIKLPNEGAKELVKVPE
PSVQFVQTREVQSREFLNRRYLPEPDFHSQGKTKTLQPWKADFAAMKQEPPDSWEMQFED
SRMPSPQPVPTKQGIAAAGLVTKDQVESKVTITSPKKKHERKPKAEQEVKPVPKPIHSPI
AVFNSTSSLPKDPALRKQKLQDLMAQIQGSFSFMQDSVLDCESSPASAMPLLTPLSVLAS
STPLAPREPKQKKQTDLLLQALQTAPSTDDSPSTSLNGDRSLSGSEIDLDSAAAQETISA
SPEAESFVSPPAIYQTASIPAPLVEKGMDPTRMPLPCEQQMPLCNDTMPAPELQAQAFQS
PPSSNHALSMSAAPFQTMHTVFKVNAPLPPRDEPDMKPESYNQSYSTASTQTTPQCSSQP
AYTLDQNPLPHETLQPVATYQSECPVSNGCQVYMSPGQLNAFPRSNQAYYNNRGAIRGTP
RGSRGLANSYRSPSGYKAGFDGYRGGMQSPGGNYTQQSYPAREYTTMLYGSREAGYQQNY
KRGGGPAGQKANSRAGWSDSSQVSSPERDHETFNSVDSGQGDSRCITPIDIPVTSQATTL
MPVHVYPLPPQMRVAFSAARTSNFTPGTLDQTIAFDLLLNNLGETFEMHMGRFSCPVNGT
YVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLYQGDQIWLRL
HRGAIYGSSWKYSTFSGYLLYQD
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccttcccctgtaccttgcctctccccaacagaccaggcagatgat
gggaagatgacggtcaagactgagaaaaagcagggaagccccaagtctgatgttcagttt
gccctcacctcactgcagctggctctggctgcttccaccaccacttaccagggctacgac
gcctacatagaggatgggctaatctgccttaaacacaagatccgaaacattgaaaaaaag
aagattaagctggaggactataggcagcgtcggcaggaaggacaactacttaatcaagat
caactggatgcagtggaaaagtatgatgaagtcattcataatttggcatttgccaaggag
ctgcagaagacatttagttccctgagtcaagatctgttaaaagcccagaagaaggcagtg
cggcgcgagcaggttctgaagattgaaacagaaaaacgccgcctgcgcaccatcctccag
gtgcagtacattctgcagaacctgcaggaggagcacgtgaggaaagacttccgtagcggc
ctcaacggggccccctttctctctgccagggagctcgactacctcctgaagttctccaaa
ctggcctccctggtgcgcgatgagatgatgagcctggaggaccagatggagcaggcaaca
agctacctttgggagttacttgaaggaggagaaaaagttgtggttggtactacctataaa
cacctgaaggcgcagatggcaaaactgatggactgtgggtactttgaccacattcctgtc
cctcagagtaagatgctggaggaggtgaaagaggttcataaattagtggaagtggcaaag
acagaaccactaataaagctgccaaacgagggtgcaaaggagctggtgaaagtaccagaa
ccttctgtgcagtttgtacagacaagggaagttcagtcaagagagtttcttaacagacgc
tacctgcctgaacctgacttccacagccaaggaaagacaaagaccctgcagccctggaaa
gcagattttgcagccatgaaacaggagcctcccgactcttgggagatgcagtttgaggac
agcaggatgccatccccacagccagtgccaaccaagcaggggatagctgctgctgggctt
gttacaaaagaccaggtggagtctaaagtgacgatcacctcaccaaaaaaaaaacatgag
cggaaacccaaagcagaacaagaagttaaaccagtgccaaagccaatacattcccccata
gctgtgttcaattccacttcctcccttccaaaggacccagcactgagaaagcagaagcta
caagatttgatggctcagatccaaggatcattcagttttatgcaggactctgtgctggat
tgtgagagttcacctgcgagtgccatgcccctgttaacaccgctttctgtgcttgcctca
tccacccccttagcaccaagagaaccaaagcagaaaaaacagacagacctccttctacaa
gccttgcagactgccccttcaactgatgatagtcccagcactagcttgaatggagatcgg
tcactgagtggatctgaaattgacctcgattcagcagctgcacaagaaactatttcggca
tcgcctgaggcagagtcctttgtttctcctccagcaatctatcaaacggcatcaatccca
gcccccttggtagagaagggcatggacccgactcggatgcctctgccatgtgaacagcag
atgcccctttgcaacgacacaatgccagcccctgaattacaggcacaggcattccagtca
cctcccagcagtaaccatgccttaagcatgagtgcagctccctttcagaccatgcatact
gtttttaaagtgaatgctccattgccgccgagggatgaaccggacatgaaaccagagtcc
tacaaccagagctattctacagcaagcacccagacaaccccgcagtgctcctcgcagccg
gcctacacactggatcaaaaccctctccctcatgaaaccctgcagccagttgcaacctat
cagtctgaatgtccagttagcaatggatgtcaagtttacatgtctccaggacaactgaat
gccttccctcgctccaaccaggcctactacaataacagaggtgcaataagaggaacgccc
cgtgggagcagaggcctggcaaactcgtatcgctcacccagtggatataaagcagggttt
gatggttacagaggtggaatgcagtccccgggtggaaactacactcagcaatcctatcct
gccagagaatatacaacaatgctgtatggatcaagggaagccgggtatcagcagaactat
aaacgtggaggagggcctgctggacagaaagcaaattcaagagcagggtggagtgactcc
tctcaggtgagcagtccagaacgagatcatgaaaccttcaacagtgtggactctggccag
ggggactcccgctgcatcacgcccattgatattccggtcacgagccaggcgaccaccctc
atgcctgtgcacgtctacccgctccctccacagatgcgtgtggccttctctgctgcccgc
acctccaacttcaccccaggcaccctggaccagaccattgcctttgacctgctcctcaac
aacctcggggagacctttgaaatgcatatgggccggttctcctgcccggtcaatggcact
tatgttttcatcttccacatgctgaagctggcagttaatgtaccactctacgtgaacctc
atgaagaatgaggaggtcttggtgtctgcctatgccaatgatggtgcccctgaccatgag
actgccagcaaccatgctgtgcttcagctttaccaaggagaccagatctggctccgccta
caccgaggtgccatctacggaagcagctggaagtattccacattctctggctacctcttg
taccaggactga
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