Acipenser ruthenus (sterlet): 117419632
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Entry
117419632 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117419632
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117419632
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
117419632
NCBI-ProteinID:
XP_034782376
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All DBs
Position
14:17573126..17603519
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AA seq
1713 aa
AA seq
DB search
MWILQIATIQAVWVHALAQGPQLSYGCAEGSCYPATGDLLIGRADRLSSTSTCGLLKPEP
FCIVSHLQEEKKCFVCDSKERYDENVNHTTSHGIENVVTTFAHNRLKTWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIESSSDFGRAWQVYRYYAYDCESAFPGISVGPM
KKVNDVICDSRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPSIQNMLKITNLRINLTRLHT
LGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGTGEDVEGMVHGHCMCRH
HTKGLNCEQCEDFYHDLPWRPAEGRNSNACKKCNCNEHSFTCHFDMAVYMSTGNVSGGVC
DSCEHNTMGHNCEQCKPFFYQHPERDIRDPNICEQCNCDPVGSHNGGICDRYTDFSTGLI
AGQCRCKPNVEGERCDQCKEGFYGLSDDPLGCQPCTCSPLGTLPGGNPCNVETGNCYCKR
LVTGRNCDQCLPQHWGLSNDLDGCRSCDCDHGGALNNNCSAETGQCECREHMFGRQCSEV
ESGFYFIALDHYTYEAEDANFGPGVSIVQRPYPQDRTPTWTGIGFVNVPEGAYLEFYIDN
IPTSMEYDILIRYEPQLPDKWEEAVITVVRPDIISTSSRCVNTVPDDDNQVVSLPPGSRY
VVLPRPVCFEQGLNYTVRLHLPLYSPLNDVQSPYTLIDSIVLMPHCKALEMFTSGSGEDV
ATNSAWETFQRYRCLENSQSVVETPMTDICRNIIFSISALLHQGALSCQCDPQGSLSTVC
NPSGGQCQCRPNVIGRNCDKCAPATYLFGPSGCRSCECNPQGSSNSFCHVETGQCQCIPG
AYGRQCERCLPGYWGFPNCRPCNCNGHTDHCDPQTGECVGCKDQTTGRTCDRCLTGYYGN
PILGSGSITPKLVIVRTLCVSRATSTTLRVGSLDSISKLGYVTGDALTQTCRKCVCNYLG
TVNDTCPSSNECHCDLNNGQCQCLPNVIGQNCDQCATDTWNLASGNGCEDCDCDETRSFG
SSCNELTGQCVCKPGFGGRACNNCQELFWGDPAEECKACDCEPSGIQTPQCDRTDGNCIC
EEGIAGPRCDKCARGYSGVFPDCVQCHQCFAEWDVIIGDLTNKTHKLLKKVNSIKASGIT
GPYQDTVNAIEQRANDIRSLLAQNPAAQPLNDIQNLLEEAQKLITEVNKNVQNVELELAA
TSANNSNTNTELDDLQKESQNLNKVVNDLAEQLEFVKNSDIQGALDSVNKYFQQSMDAES
RVNTSTTDPDNTVEQSSAIRQQVEDLMNETRIQFEENQENYTKHLDDLAAQLQTLDLSEV
NEKTCGSSSGGSCTEGQCGGLSCRDEDGTKKCGGEGCDGLVTLSHNAWKKAVDFDTEILN
VLAEVDQLSKMVSEAKLKADEAKLNAQEVLQKTNSTKQKVDKSNEDLRNLIKQIREFLTQ
DGADLESIEAVANEVLKMQMPTTPQQLQELTDDIRERVESLSDVEIILSQSADDIHRAET
LLGEARKASKEATDVKNTADMVKEALEEAEKAQNAAEKAIMQADVDIRGTQDLLTSIESE
TAASESRLNNATQRLAQLEKDIGDLKQKASDNTDMAEEIEKSADKVKHDAEEAKRELDDE
LKNKYNDVEVLIVQKSEGVADARQRAEALQNEAKQLLSHAGGRLQELKALEKTYEDNQKT
LEDKAKLLVELEEAVRSLLQIISQKVAVYSTCL
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgtggatacttcaaatcgctacgatccaagctgtctgggtgcacgcccttgcccaggga
ccccagttaagttacggctgtgctgagggaagttgctatccggccacaggtgacttgttg
atcggaagagcggaccgtctttcttccacgtccacctgtggattgttaaaacctgaaccc
ttttgcattgttagccatctgcaggaagagaagaagtgctttgtttgtgattccaaggaa
cggtatgatgagaatgtaaaccacacaaccagccatggcattgagaatgttgtaacaaca
tttgcacataaccgcttaaaaacctggtggcagtctgaaaatggtttggaaaatgttacc
atccagctggatctggaggcggaattccatttcactcatctcattatgaccttcaagaca
tttcgtccagctgccatgttgattgagagctcttctgattttgggagggcctggcaggtg
taccgttattatgcatatgactgcgaatctgcattcccaggtatttctgtggggccaatg
aagaaagtcaatgacgtcatctgtgactcccgctattcggacatcgaaccatctacagaa
ggagaggttatctttcgagtcttggatcccgcttttagaattgaagacccttacagcccc
agtatccagaatatgttaaaaatcactaacctgcggatcaatcttacaagactacacacc
ttgggagataacttgctggactcaaggatggaaatcaaagaaaaatactattatgccatc
tatgacatggtagtccgtggtaattgtttctgttatgggcatgcaagtgaatgtgctcct
gtagatggaactggagaagatgttgaaggaatggtacacgggcattgcatgtgcagacac
cacaccaaaggtttgaactgtgagcagtgtgaggatttctaccatgatctaccctggagg
ccagctgagggacgcaacagcaatgcttgtaaaaaatgtaattgcaatgaacactcattc
acctgtcactttgatatggctgtgtacatgtccacgggaaacgtcagtggaggtgtatgt
gacagttgtgagcacaacactatgggacataactgtgaacaatgtaagcctttcttttac
caacatccagagagagacatccgtgaccccaacatctgtgaacaatgtaactgtgaccca
gttggttcccacaatggtggaatctgcgatcgctacactgacttctctactggtctcatt
gctggacaatgtcgctgcaaaccaaatgttgagggcgagcgttgtgatcagtgtaaagaa
gggttctatgggttaagtgatgatcccttggggtgtcagccttgcacatgcagtcccttg
ggaactcttcctggaggaaatccatgcaatgtagagacaggaaactgttactgcaaacgc
ttggtaactgggaggaactgcgatcagtgtctgccacagcactggggactgagcaatgat
ctggatgggtgcaggtcttgtgactgtgaccatggtggagcgctcaacaacaactgttct
gcagaaaccggacagtgtgagtgcagggagcatatgttcggacgccagtgcagtgaagtt
gaatctgggttttactttattgcactcgatcattatacatacgaggcagaggatgccaac
tttggcccaggagtgagcatagtccagagaccatatcctcaagatcggacaccaacttgg
acaggaatcgggtttgtgaatgttccagaaggagcctatctagaattctatattgacaac
atccccacttcaatggagtatgatattctaatacgctatgaacctcagttaccagataag
tgggaagaagccgtaataactgttgttcgcccagacatcatttctaccagcagcagatgt
gtgaatacagtgcctgatgatgacaaccaggtggtatctctgcctccaggttccagatat
gtagtcctgccacgccctgtgtgttttgagcagggactgaattatactgtccgcctgcat
ctgccactttactcccctctgaatgatgtccaatccccatacacattgattgattctatt
gtactcatgcctcactgcaaagcgttagaaatgtttaccagtggttcgggggaggatgtt
gctacaaacagtgcctgggaaaccttccagagataccgctgcctggaaaacagtcaaagc
gtggtggaaactccaatgactgacatctgcagaaacatcatctttagtatttctgcactg
cttcatcaaggagcattgtcctgtcagtgtgatcctcaagggtctcttagcacagtgtgc
aaccccagtggaggacagtgccagtgcaggcctaatgtgattgggagaaactgtgacaaa
tgtgctcctgcgacctacttgtttggacccagtggctgtagatcctgtgaatgtaacccc
cagggctcttctaattctttctgccatgttgagactggacagtgccagtgtatccctgga
gcctatggtcgtcagtgtgagagatgtttgccaggatactggggatttcccaactgtcgt
ccctgcaattgcaatgggcataccgaccactgtgacccccagactggagagtgtgtgggc
tgtaaggatcaaaccacaggccgcacctgtgatagatgtttaacaggttactatggcaat
ccaattctcgggtcaggttcgattactcccaaactagtcatagttaggacattgtgtgtc
agccgtgccacatctaccacactgagggttggaagcctggattcgatttcaaagcttggc
tacgtaactggagatgctctgacacaaacctgcagaaagtgtgtttgtaactacctgggt
acagtgaatgatacctgcccctcttcaaatgaatgccactgtgacctcaacaatggtcag
tgccagtgtctcccgaacgtgattggacagaattgtgatcagtgtgctacagacacttgg
aatctggccagtgggaatgggtgtgaggattgtgactgtgatgaaacacgttccttcgga
tcatcttgcaatgagttaacaggtcaatgtgtgtgcaagcctggatttggaggtcgtgct
tgcaacaactgccaggagcttttttggggagatcctgctgaggaatgcaaagcttgtgac
tgtgaacccagtggcatccagacaccccagtgtgaccgcactgatgggaactgtatctgc
gaagaaggaatcgcaggtccgcgttgtgataaatgtgctagaggctactctggcgttttc
ccagactgtgtgcaatgtcatcagtgctttgcggagtgggacgttatcattggagaccta
accaataagacccacaagcttctgaagaaagtgaactcgatcaaagcaagtggcattact
ggaccctaccaagacacagtaaacgcaatcgagcaaagggccaatgatatcagaagtctt
ctagctcagaatcctgccgcccagcctctcaatgacattcaaaatctcctggaagaggca
cagaaactgatcacagaggttaacaaaaatgtacaaaatgtagaactggaacttgctgcc
acgtcagccaataacagcaacacaaacactgagctagacgaccttcagaaagaatctcag
aatttgaacaaagtggttaatgacttggcagagcagctggaatttgtcaagaattctgac
atccaaggagctttagacagtgtcaacaagtattttcagcagtctatggatgctgaatca
cgggtaaatacttccactactgacccagataacacagtagaacagtcctctgccattcgc
cagcaagtggaagacttaatgaatgagactcgtatccagtttgaggaaaaccaagagaat
tatactaaacatttagatgatcttgctgctcagctacaaaccctagacctgtctgaagtc
aatgaaaagacttgtggaagttcttctggaggctcttgtactgaaggacagtgtgggggt
ttaagctgtcgtgatgaagatggaaccaagaagtgtggaggcgagggctgtgatggtctt
gttactttgtctcacaatgcttggaagaaagctgtggactttgacacagaaattctcaat
gtcctggcagaggtggaccaactgtctaaaatggtttctgaggcaaaactgaaggctgat
gaggccaagctaaatgcacaggaagttctccagaaaacaaactcaaccaaacagaaagtg
gataaaagcaacgaagacttgagaaatttaatcaagcaaatccgcgagttcttgacacag
gatggtgcggatctcgaaagcattgaggctgttgctaacgaagtgttgaaaatgcagatg
cctactaccccgcaacagcttcaggagttaactgatgacattcgggagcgagtggaaagt
ttgtctgatgtggagataatcttgagtcagagtgctgacgatattcacagagctgagact
ctgcttggtgaagccagaaaagcaagtaaagaagcaacagatgtcaagaatacagctgac
atggtaaaggaagccctggaggaagccgaaaaagcccagaatgctgcagagaaagcaatt
atgcaggctgatgttgacatcagagggactcaggacctgttgacctcgattgaatccgag
actgcagcttcagagagcagactaaacaatgcaacccaaagacttgctcagctggagaag
gatattggtgatctaaaacagaaggcatctgacaacacagacatggctgaagagattgag
aaatcggcagataaagttaagcacgatgcagaggaagctaaaagggaattggatgatgaa
ctgaagaacaagtataatgatgtagaagttctaatagtccaaaagtcagaaggtgtggct
gatgcaaggcagagggcagaggcacttcaaaatgaagcaaaacaattgctgtcacatgct
ggcggcagacttcaggagctaaaagctttagagaaaacatatgaagataaccagaaaacc
ttagaagataaagcaaagcttttagttgagctcgaggaggcagtacgctcacttttacag
attatcagccagaaagttgctgtttatagcacctgcttgtaa
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integrated database retrieval system
