Acipenser ruthenus (sterlet): 117419748
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Entry
117419748 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117419748
03015 mRNA surveillance pathway
117419748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117419748
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117419748
mRNA cycle factors
P-body specific factors
117419748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF1722
Motif
Other DBs
NCBI-GeneID:
117419748
NCBI-ProteinID:
XP_033888680
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All DBs
Position
14:complement(19766594..19795470)
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AA seq
1282 aa
AA seq
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MPAERKKTVNMDEKEASSVSSKDKESGDRRPASTREKGKDDSKLGGKKDNMKAAEEKKRK
LEEEKRKKEEKDRKKKEEEKLKAEEDQKKKEEEEKIKQEEEEKRLQEEEXKGRQREEEAA
QIKEKEEAHQLHQEAWERHQSRKELRSKNQNAQDGRPEETFFSRLDSSLKKNTAFVKKLK
TITEQQRDSLSSDFSSLNLSKYIAEAVGSVVEAKLKISDVNCAVHLCSLFHQRYAEFAPL
LLQSWKKHFEARKEEKTPNVSKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINTDR
ETHMHVSVVISFCKHCGDDIAGLVPRKVKLAAEKFGLSFPLSEIINSEKQQPFQNLLREY
FTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADL
LDENMPELPQDKTVQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENMVDLKAFVP
AILFKDNEKSSQNKDNKEEAKEVKDGKDNKDVPSTEELEMELETLDINDDTLEMEAVDEA
EADDLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTK
SNRRKLVRALFTVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLKGDFRFHVRKKDQI
NIETKNKTVRFIGELTKFKMFSKSDTLHCLKMLLSDFSHHHIEMACTLLEASGRFLFRTP
ESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPVEKTVRRKRPPLQEYIRKL
LYKDLSKVTTEKVLRQMRKLPWQEPEAKNYLICCMVNIWNLKYNSIHCVANLLAGLVAYQ
EDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFIS
FGVNPDGTASPLDPPEHLFRIRMVCTVLDTCGQYFDRGSSKRKLDCFLIYFQRYIWWKKS
LDVWTEGHPFPIDIDYMLSDTLELLRPKMKLCCSLEEAIRQVTGLEREFLVKLGLANDKD
SKDSSSIREGEAMEEEDEDDDEEGGAETEEQSGNESEMNEPEEEGSENEEEEGERERERE
EEEEENTDYLTDSNKENETDEENNEVTIKGGGLKHVACAEDEDFIQALDKMMLENLQQRS
GESVKVHQLDVAIPLQLKSQLKKGPPPTGGGEGDTEIADTMQFVMLTRKGNKQQFKILNV
PLSSHLAANHFSQQQVEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRER
RPRYQHPKGAPNADLIFKTGGR
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagaacgcaagaagacagtaaacatggatgagaaagaggcaagttctgtcagc
agcaaagacaaagagagtggagataggcgacctgcctccaccagggagaagggaaaggat
gattccaaactcggcggcaagaaggacaatatgaaggctgcagaggaaaagaagaggaaa
ctggaggaagagaagcgtaagaaggaagaaaaggatcgcaagaaaaaagaggaggagaag
ctgaaagctgaagaggaccagaaaaagaaagaggaggaagagaaaataaagcaggaggag
gaggaaaagaggctgcaggaggaagaanngaaaggaagacagcgtgaagaagaagcagcg
caaataaaagaaaaagaagaagcacaccagttacatcaggaggcatgggagcgtcaccaa
tcccggaaagagcttcgcagcaagaaccagaatgcccaggatggccgtcctgaggagacc
ttcttcagcaggcttgattctagcctcaagaagaacactgcctttgtcaagaagctgaaa
actatcacagagcagcagagagactctctctccagtgattttagtagcctcaacctcagc
aagtacattgcagaggctgttggctccgttgtggaggcaaagttaaaaatatctgatgtt
aactgtgctgttcatctgtgttccctcttccaccagcgctatgctgaatttgcccctttg
cttctccaatcctggaaaaagcactttgaagcaagaaaagaggagaaaactcccaatgta
agcaagctgagaaccgacctccgattcatcgctgagttgacaattgttgggatttttact
gataaagagggtctgtccctcatctatgagcagctgaaaaacatcatcaacacagaccgt
gagacacacatgcatgtatccgtggtgatcagtttttgcaagcactgtggggatgacatt
gctgggctggtgcccaggaaggtgaaactggctgctgagaagtttggattgagtttccct
ctgagtgagatcatcaattctgagaagcagcagcccttccagaacttgctaagggagtac
ttcacttccctgaccaaacacctgaagaaggaccacagagagttgcagaacatagagaga
caaaacaggcgtattctgcattccaagggggaactgagtgaagacagacacaagcaatat
gaagagtttgctacatcttatcagaagctgcttgctaacactcagtctttggcagacctt
ctggatgaaaacatgccagaacttccacaagataaaactgtacaagaagagcatggtcct
ggcattgacatctttactcctggcaagcctggagagtatgatctggaaggaggaatctgg
gaggatgaggacgcacgtaacttctatgaaaatatggttgatctaaaagcctttgtacct
gcaatattgttcaaagataacgagaagagttctcagaacaaagacaacaaagaagaagca
aaagaagttaaagatgggaaggataataaagatgtgccgagtacagaagagctggagatg
gaactggagaccctggatattaatgatgatactctggagatggaagcagtggatgaggca
gaggcagatgaccttacaaagaaattacttgatgaacaagaacaagaagatgaagaagca
agcacaggctcccacctcaagctgatagtggatgcctttcttcaacaattacccaactgt
gtcaacagggacttgatagacaaggctgcaatggatttctgtatgaatatgaacaccaag
tctaacagaagaaagcttgtccgagcccttttcacagttcctaggcagcggctggatttg
cttccgttttatgctcgtcttgttgctacattgcatccttgcatgtctgatgttgcagag
gacctttgctctatgctaaaaggagacttcagatttcatgtacggaagaaggaccagatc
aatattgaaacaaaaaacaagactgtaagatttataggagagctgacaaagttcaagatg
ttttctaaatctgacactcttcattgtttaaagatgctactatctgacttctctcatcac
cacattgaaatggcctgtactcttctggaggcatctgggcgatttctcttcaggacacca
gaatcccacttgaggaccagtgtccttttggaacaaatgatgcggaagaaacaagccatg
cacttagatgcccgctatgtcaccatggtagagaatgcatattattattgtaacccacct
ccagttgaaaaaactgtgaggagaaagcgaccaccacttcaagagtatatccgcaaactc
ctttacaaggacctgtccaaagtcaccacagaaaaggtgctacggcagatgagaaaattg
ccctggcaggaaccagaggcaaaaaattatttaatctgttgtatggttaacatctggaat
ttaaagtacaacagtatccactgtgtagccaacctgctagcagggctggtggcatatcag
gaggatgtgggcatccatgtggtggatggggtgcttgaggacatcagactgggaatggag
gttaaccagcccaagttcaatcaaagacgaatcagcagtgccaaatttttgggagaattg
tacaactatagaatggtagaatcggcagtgatcttccggactttgtattcctttatttca
tttggtgtaaatcctgacggaactgccagtcccctagatcctccagagcatcttttccga
atccgtatggtttgtactgttttggatacatgtggacaatactttgacagaggatcaagc
aaaagaaaacttgactgctttcttatctacttccagcgttacatctggtggaagaagagt
ttggatgtctggaccgaaggccacccattccctattgatattgattacatgctcagtgat
accttagagctgctgcgaccaaagatgaaactgtgttgctctctggaagaggctattcgg
caggtgacaggcttggagcgtgaattcctggttaaactagggctagctaatgacaaagac
tcaaaagactcgagcagtattagagaaggagaagccatggaagaggaagatgaagatgat
gatgaggaaggtggtgcagagactgaggagcagtctggaaacgagagtgaaatgaatgag
ccagaagaggagggttcggagaatgaggaggaagagggagagagagaaagagagagagag
gaggaagaggaggagaacactgactacctgactgattcaaataaagaaaatgaaactgat
gaagaaaacaatgaggtaacgataaagggcggaggtctcaaacatgttgcctgtgcagag
gatgaagacttcatccaggccttggataagatgatgctggagaaccttcagcaacgcagt
ggcgagtcggtgaaagtgcaccagctggatgtagccattcctctgcagctgaagagccag
ctaaagaaaggacccccacctacaggagggggggagggagacaccgagattgcagacacc
atgcagtttgtgatgttaacgaggaagggcaacaagcagcagtttaagatcctaaatgtt
cccttgtcatcccatcttgctgccaaccacttcagtcagcagcaagttgagcaggaggag
aggatgcgcatgaagaaactcaccctggatattaatgaacggcaagagcaggaggattat
caagagatgttgcaatccctagcacagcgcccagcccctgctaacacaaaccgggaaagg
aggccccgttaccaacatcccaaaggagcgccgaatgccgatctcatcttcaagactgga
gggaggtaa
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