Acipenser ruthenus (sterlet): 117419841
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Entry
117419841 CDS
T07327
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117419841
03009 Ribosome biogenesis [BR:
arut03009
]
117419841
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117419841
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117419841
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
Pre-60S particles
Helicases
117419841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Zip
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
117419841
NCBI-ProteinID:
XP_034761769
LinkDB
All DBs
Position
24:17154445..17167728
Genome browser
AA seq
708 aa
AA seq
DB search
MEKAPTTLDDKIDKIRKKRKIEQKASKEGKKTKTDSEEEVKEEEEEEEEEDGEEGEEEDG
EEEEDGEEEEEGEEGSDNDQDDDEELDEFSSADEEVLTKADTLKVKDRKRKKKKEEVPEV
FFEDASQYDDSLNFQDMNLSRPLLKAITTLGFKQPTPIQKACIPVGLMGKDICACAATGT
GKTAAFMLPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLTVGG
LDLKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELSSIEILILDEADRMLDEYFEEQMK
EIIRLCAHQRQTMLYSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRVRPAR
EGDREAIVSALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESL
RRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSL
VGEQERKMLKDIVKQAKTPVKARVLPQEVILKFRDRIEKLEQDIYAVMRLEREEREMTRS
EAQISSAQKRLGPREEESRMERTWFQSNEERKRDKMAKALQDFDLALRGKKKRQKFLQDR
KKKELSAEDRAQFEMLKSQMYAERAAKRGRKPKRARAMPEDEPVAKGKPKKGQSGMKKSV
FDKELTNTSKRALKQYRAGPSFEDKKRLGLPAHKKGGRFKSQAKFKRK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagctccgacaacactggatgacaaaatcgacaagatccggaagaaacgcaaa
atagagcagaaggcaagcaaagagggaaagaaaacaaagacagactcggaggaggaggtg
aaggaagaggaggaggaagaggaggaggaggatggggaggagggggaggaggaggatggg
gaggaggaggaggatggggaggaagaggaggagggggaggagggcagtgacaatgaccaa
gacgatgatgaagagctggatgaattctcctcagccgatgaagaagtcctgaccaaagca
gacacgttgaaggtgaaggataggaaaagaaagaagaaaaaagaggaggtgccagaagtg
ttttttgaagacgcatcacagtatgatgacagtctgaacttccaggatatgaacctgtct
cgcccattgctaaaggcaatcacaacgctgggattcaagcagcccacgcccatccagaaa
gcctgcatccctgtggggctcatggggaaggatatctgtgcctgtgctgccactgggaca
ggtaagaccgctgccttcatgctccctgtcctggagcgtctgatctacaagcctcggcag
gctccagtgacccgggtgctggttctggttccgacccgtgaactggggatccaagtacac
tctgtggccagacagctagcccagttcaccagcatcacaacctgcttgactgtgggtggt
ctggatctcaagtcccaggaggctgccctgcgtgctggccctgatgtgttgattgctacc
ccgggccggctgatcgaccatctccacaacacaccctccttcgaactgagcagcatcgag
atcctcattctggacgaggctgacaggatgttggatgagtatttcgaggagcagatgaaa
gagatcatccgactctgtgcccaccagagacagaccatgctgtactccgccacgatgagt
gaagaggttaaagacctggcctcggtgtctctgaagcagccggtccggatctttgtgaac
agtaacaccgacgtggcgccgtacctccggcaggagtttgtgcgggtcaggccggcccga
gagggggatcgcgaggccattgtctcagctttgctgacccgcaccttcactgatcatgtg
atgctcttcactcaaaccaagaagcaagcccaccgcatgcacatcctgctggggctgatg
ggattgaaggtgggggagctccatggcaacctgtcccagacccagcgactcgagtcactc
aggcgattcaaagatgaacagatcgacattctcgtggccaccgacgtggcagccagaggt
ctggatatcgacggtgtgaaaacggtgattaacttcacgatgcccaatacagtgaagcac
tacgtgcacagggtgggacgcacagcccgcgcagggaaggtcggccgatccgtctcgctg
gtcggggagcaagagaggaagatgctgaaagatatcgtcaagcaagccaagacccccgtc
aaggcccgtgtcctccctcaggaggtgatcctgaagttcagggaccggattgagaagctg
gagcaggatatttacgcagtgatgcgattggagagggaggagagagagatgactcgatca
gaggcccagatcagctctgctcagaagaggctgggaccgcgggaggaggagagcaggatg
gagaggacctggtttcagagcaatgaggagcgcaagagggacaagatggccaaggctctg
caggactttgatctggctctgagagggaaaaagaagagacagaagttcctacaggaccgt
aagaagaaagagctgagtgcggaagaccgggcccagtttgagatgctcaagtctcagatg
tacgccgagcgagcagctaagagggggcgcaaacccaagcgagcccgcgccatgcccgag
gacgaaccagtggccaagggtaaaccgaagaaaggccagtctgggatgaagaagtctgtg
tttgataaggagctgaccaacaccagcaagcgggccctcaagcagtatcgtgcaggcccc
tcatttgaggataagaagagactggggctgccagcgcacaagaagggaggccgtttcaaa
tcccaagccaagttcaagaggaaatga
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