Acipenser ruthenus (sterlet): 117419859
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Entry
117419859 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117419859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117419859
Transporters [BR:
arut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117419859
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117419859
NCBI-ProteinID:
XP_034782316
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Position
14:769158..884194
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AA seq
622 aa
AA seq
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MESKPPADTANGHNQALDVYPKNREKIEDRGQWNNKLEFVLSVAGEIIGLGNVWRFPYLC
YRNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTSEGGVTSWRKISPLFEGIGYATQVIV
ALLNFYYIIVLAWGIFYLSNSFTWELPWASCNNTWNTGSCVEFQKRNETYNWTAPANTTS
PIIEFWEKRVLRISSGIDHIGILHWDLALCLLLAWVMCYFCIWKGVKSTGKVVYFTATFP
YVMLVILMIRGVTLPGAAEGIKFYLYPDLSRLADPQVWMDAGTQIFFSCFFAICLGCLTA
LGSYNKYNNNCYRDCLCLCFLNSGTSFIAGFAIFSILGFMAYEQQVPISEVAESGPGLAF
IAYPRAVSMMPFSSLWACFFFIMIVLLGLDSQFVCVESLVTALVDMFPSYLAQGYSSSNR
RELLILGICVVSYFMGLIMITEGVGMYVFQLFDYYAASGMCLLFVAIFETVCIAWVYGAD
RFYDNIEDMIGYRPGPLIKYCWMFFTPAVCAGTFAFSLIKYTPLKYNKSYVYPWWGYALG
WLLALSSMVCIPLWIIYKIATSKGTLRERICHLIKPSEDLPKTKKEQEKLLAIFASDNGL
HQQDGDPNREGYVLVTDKETNC
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaagcccccagcagacactgccaatgggcacaaccaggccctggatgtctac
cccaagaacagggagaagatagaggatagagggcagtggaataacaagctggagtttgtg
ctgtcagtggctggggagattattggactggggaacgtttggaggttcccctacctctgc
tacaggaatggaggaggtgccttcttcatcccttacctcatcttcctgttcacctgtggg
atccctgtgttctttctggagacggcactgggacagtacactagtgaagggggtgtgaca
tcatggagaaaaatcagccctctttttgaaggtatcggttatgccacccaggtgattgtc
gccctgcttaacttctattacattatcgtgctggcctggggaattttctacttaagcaac
tcatttacttgggaactgccctgggcatcctgcaacaacacctggaacacaggttcctgt
gtggagtttcagaagagaaatgaaacatacaactggacagccccagcaaacaccacctct
cccatcatagagttctgggagaaacgggtgctgaggatttcttcaggcattgaccacatt
ggcatattacactgggacctggcgctctgtctcttgttggcctgggtcatgtgctatttc
tgcatatggaaaggagtcaagtccactggcaaggtggtgtacttcaccgctacgtttccc
tacgttatgctggtgatcctgatgatccgaggggtgactctgccgggggcagctgaagga
atcaagttctacctgtacccagacctcagccggctggcagacccccaggtgtggatggat
gcagggacccagattttcttctcttgcttttttgctatttgcctgggatgtctgacagct
cttgggagctacaacaagtacaacaacaactgctacagggactgcctgtgcctgtgtttc
ctgaacagcgggacaagcttcatagctggctttgccatcttctccatactgggatttatg
gcttatgaacagcaagtgcccatttcagaagttgcagagtctggtcctgggctggcgttc
attgcgtacccacgagccgtgtccatgatgcctttctcttcactgtgggcctgcttcttc
ttcatcatgattgtccttctcggacttgacagtcagtttgtgtgtgtggagagcctggtg
acagcgctggtcgacatgtttccctcttatcttgctcaagggtacagcagcagtaacaga
agggagcttctgatcctcggcatctgcgtcgtctcctatttcatgggacttatcatgatc
acggagggggtgggaatgtacgttttccagctctttgattactatgctgccagtgggatg
tgtctactgtttgtggctattttcgaaacagtttgcatagcttgggtctatggtgcggat
cgtttctatgacaacattgaagacatgattggttacagacctggacctctcatcaagtac
tgctggatgttcttcactcctgctgtctgtgcgggaacctttgccttctccctcatcaag
tacactccgctcaagtacaacaagagttatgtgtacccctggtggggttacgccctgggc
tggctccttgccctctcctccatggtgtgcatccccctctggatcatctacaagattgcc
accagcaagggcaccctgagagagcgtatctgccatctgataaaaccttctgaggatcta
cccaagaccaagaaagagcaggagaagctcttggccatcttcgcgtccgataatggctta
caccagcaggacggggatcccaacagggagggctatgtcctggtgactgacaaggagacc
aactgttag
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