Acipenser ruthenus (sterlet): 117419883
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Entry
117419883 CDS
T07327
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04110
Cell cycle
arut04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117419883 (smc1b)
04114 Oocyte meiosis
117419883 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117419883 (smc1b)
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117419883 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
117419883 (smc1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_15
CATRA-C
Motif
Other DBs
NCBI-GeneID:
117419883
NCBI-ProteinID:
XP_033889109
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All DBs
Position
14:8175499..8228757
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AA seq
1228 aa
AA seq
DB search
MGYLKQIDVENFKSWRGRQIIGPFKRFNCIIGTNGSGKSNVMDALSFVMGERAVSLRVKH
TRDLIHGAHIGKPASATARVMMTYCEENGEEKTFSRTITGDSSEYHLNGRVVTLSHYTSE
LQKIGIIVKARNCLVFQGAVESIAMKKPKERTQLFERISNSLDLADSYEKKKKELQKAEE
DAQFHYNNKKNVAAEQKHVKQEKEEAQRYQTLVEDLNDKKVQLHLCRLYYNEKSIDSLKD
SLQEKKGDIAIKKSSLEESESKVRALKKEHGRLSREQQQIEKEIKAQEQAINQKRPQYIK
AKVNTSHQIKKVEEAKSSLKKSEKQFSKKEQEIQELENELADLERAWRDFERKVEEQTLT
VGRDVQLEESQKERYKELKELARKKVATMTQNFEKLRWELKADFEKLEFDQRKKKEVEGN
MKHTLMQIDDYTKRAEQLEEYINTCNGALIELRKQEESLAEEMETSMVRTAELNEKLAGV
LGELQNARIDHHEGRRQQMREELLESMKRHYPEAVFGRLFDLCHPIHKKYQLAVTKVFGR
YMNAIVVTTEKTARDCIRFLKDERAEPETFLALDYLEIKPINERLRDMRGAKMVIDVVQC
ISPQLKKVVQFVCGNGLVCETLKEARQIAFGGPERFKTVALDGTLFSKSGVISGGSSDLR
YKARRWDEKEMDKLKEKRDELVSELRELMKVKRKEADLKQVQAQAQGVQTRLKYSQSELE
TIKKKNLANCFQEKSRLESELMNLESQLLMLKRNIDEKEAKTTEIQQEINKIEDVVFFDF
CVEIGVGNIREYEDEYVKQQQEVDEKRLRFETQKTRLSTQLEYERSQLDKERKKIQKWEE
TINKEEKKIAEQKKEEESLLKAVDKAMAEQQVLKNRLLTKKSEADDAKKELEKNTKELLV
ISRELGKLQKQSISLDTALEQKKMERHNLLLACKILCLQITLLSGSLDEISEVQVLLDTE
STDTTIGIYEREGQFQIDYSDLSQDLQDLRSEDEVEAQLNRLQQTITTQESVLQRATAPN
MKALEKIWQVRDKFHGAVDAFDASRRRARQCRQEFEQIKAKRYQLFSACFEHISVAIDQI
YKQLCRNTSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKSIAALALLFAI
HSYRPAPFFVLDEVDAALDNTNIGKVTSYIREQSREHFQVIVISLKEEFYSKADALMGVY
SEQDDCMFSRVLTLDLSPYTLSEGNERR
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttaaagcagatagatgttgagaatttcaagtcgtggcgcggacggcaaatt
ataggtcccttcaaaaggtttaattgtattattgggacgaacggttctggcaagtctaat
gtaatggatgctctcagttttgtgatgggagaaagggcagtaagcctgagagtgaaacat
acaagagatcttatccatggggctcacattgggaaaccagcctctgctactgccagggtg
atgatgacatactgtgaagagaatggagaagaaaaaacattttcaagaaccatcacagga
gattcttcagagtatcatctaaatggcagagttgtcaccctgtcacattacacatcagaa
ctccagaaaataggtatcattgttaaagcaagaaattgcttagtattccagggtgctgtg
gagtcgatagcaatgaagaaaccaaaggagaggactcagttgtttgagagaataagtaac
tctttggatctggcagacagctacgagaaaaagaaaaaagagttgcagaaggctgaagaa
gatgcccagtttcattacaacaacaagaaaaatgtggctgcggagcagaagcatgtgaaa
caagagaaggaggaggcacaaagataccagacgctggtagaagatttaaatgataaaaaa
gtccagctacacctctgccgtctttactataacgagaagagtatcgacagcctgaaagac
agtcttcaggaaaagaaaggagatattgcaatcaagaaatcatcactggaagaatcagaa
tcaaaagtgagagccttgaaaaaggagcatggcaggctgtcccgggagcagcagcagatt
gagaaggagatcaaagctcaggagcaagccatcaatcagaaacgaccccaatacatcaaa
gccaaagtgaatacttctcaccagatcaagaaggtggaggaagcgaagagctctctgaag
aagagcgagaagcagtttagtaagaaggagcaagagatccaagagctggaaaatgagcta
gccgacctggagagggcctggagggactttgagagaaaggtagaggagcagaccttaacg
gtggggagagatgtacagctggaggaaagccagaaagagcgctacaaggagctgaaggag
ctagctaggaagaaggtggcaaccatgacccaaaattttgagaagctgcggtgggagttg
aaggcagatttcgagaagctagagttcgatcagaggaagaagaaagaagtggagggaaac
atgaaacataccctgatgcagatagatgactatacaaaacgagcagaacaactggaagag
tatatcaacacttgcaatggtgcactgatagagttgaggaagcaggaggagagtctggcg
gaggagatggagacctccatggtgcgcacagctgagctgaatgagaagctggctggtgtg
ctgggagagctgcagaatgcacgcattgaccatcacgaggggcgccgccagcagatgaga
gaggagttgctggagagtatgaagagacattatccggaagctgtgtttggaagattgttt
gacttgtgccatcctatacataagaagtatcaactggcggttaccaaagtctttggccga
tacatgaatgccattgttgtgacaacagagaagacagctcgagactgcattaggttccta
aaggatgagagagctgaaccggaaacatttctagcccttgattatcttgagataaaacca
atcaatgaaaggctgagagatatgagaggggccaagatggtcattgacgtggtgcagtgc
atctcccctcaactgaagaaggttgtgcagttcgtttgtggcaatgggcttgtttgtgaa
accctgaaagaagctcgacaaattgcattcggaggacctgagaggtttaaaacagttgcc
ctggacgggactctgttctcaaagtctggagtaatctctggaggctccagtgatctgcgc
tacaaggcccgccgatgggatgaaaaagagatggacaaactgaaagagaaaagagatgaa
ctggtgtctgagctaagagagctgatgaaagtgaaaaggaaggaagcagatctgaaacag
gtgcaggcccaggctcagggagtgcagacaaggctgaaatactctcagagcgagctggaa
acaataaagaagaaaaaccttgcaaactgcttccaggagaaatccagactggaaagtgag
cttatgaatcttgaatctcagcttttaatgttaaagaggaacattgatgaaaaggaagct
aaaacaacagaaatccagcaagaaataaacaagattgaagacgttgtgttctttgatttc
tgtgttgagattggtgttggaaacattcgtgagtatgaagacgagtatgtcaagcagcaa
caggaggtagatgagaaaaggctgaggtttgagacccagaagacaagactaagcacccag
ctggagtacgagcgcagccaacttgataaggagaggaaaaaaattcagaaatgggaggag
acgattaataaagaagagaaaaaaattgctgagcaaaagaaggaggaagagagtctatta
aaagctgtggacaaagccatggctgagcagcaggtactcaaaaaccgattgctgaccaag
aaatctgaagcagatgatgcaaaaaaagagcttgaaaaaaacacaaaggaattgctggtg
atctccagggaattaggaaagctgcagaagcagtccatatccttggacactgccttggag
cagaaaaaaatggaaagacacaatctcttactggcatgcaaaattctgtgtcttcaaata
actcttctttctggatcactggatgaaatcagtgaagtacaggtattacttgataccgaa
agcacagacactacaataggtatttacgaacgtgaaggacagtttcagatagactacagt
gatctgtctcaagatcttcaggatctaagaagtgaagatgaggttgaggctcagctaaac
agactgcaacagacaattacaacacaggagagtgttctacagagagccactgctccaaac
atgaaagccctagagaagatatggcaagtcagagacaagtttcatggggccgtggacgct
tttgatgccagtaggagaagagcaaggcagtgtaggcaggaatttgagcagatcaaagcc
aaaagataccagctgtttagtgcatgttttgaacacatctctgtagccattgaccagatc
tacaaacagctctgcagaaacaccagtgctcaggcgttcctcagcccagagaatccagag
gagccctacctggagggaatcagctacaactgtgtggctccaggaaagcgctttatgcca
atggacaacttgtcaggaggggagaagtcaattgcagcgctagcgctgctgttcgctatt
cacagctatcgacctgcacctttctttgtcctggatgaagttgatgctgctttggataac
acaaatattggaaaagttacaagctacataagggagcaatccagagagcacttccaggtg
atcgtgatatccctgaaagaagaattctactccaaggcagatgctttaatgggtgtttat
tctgagcaagatgattgcatgtttagccgcgtattgaccctggacctttccccctacact
ctcagtgaagggaatgagagacgataa
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integrated database retrieval system
