Acipenser ruthenus (sterlet): 117419896
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Entry
117419896 CDS
T07327
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04150
mTOR signaling pathway
arut04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117419896 (lrp6)
04150 mTOR signaling pathway
117419896 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117419896 (lrp6)
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117419896 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
EGF
cEGF
Insulin_TMD
DUF4366
Motif
Other DBs
NCBI-GeneID:
117419896
NCBI-ProteinID:
XP_033889144
LinkDB
All DBs
Position
14:7916640..7980790
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AA seq
1612 aa
AA seq
DB search
MGAVLRSLLLCSFCSLIRGTPLLLYANRRDLRLVDAASGKGNATVVVGGLEDAAAVDFIY
SMGLIYWSDVSEESIKRIVFNQTASLQNVVVSGLVSPDGLACDWLGKKLYWTDSETNRIE
VSNLDGSLRKVLFWQDMDQPRAITLDPARGYMYWTDWGEVPKIERAGMDGTSRSIVIDSN
IYWPNGLTLDYAEQKLYWADAKFNFIHRSSLDGKAREPVVEGSLPHPFALTLYDETLYWT
DWNTHSIHSCNKITGDKRQEVHTNIFSPMDIHVFSQKRQPESLSPCGSNNGGCSHLCLMS
PMKPFYQCACPTGVRLLEDGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLKLDDIR
HAIAIDYDPVDGHIYWTDDEVRAIRRSYLDGSESQFVVTSQVSHPDGIAVDWIARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPMSGYMYWTDWGEIPKIERAALDGTD
RLILVNTSLGWPNGLALDYVENKIYWGDAKTDKIEVMNTDGSGRKVLVDDKLPHIFGFTL
LGDYIYWTDWQRRSIERVHKRSAEREIIIDQLPDLMGLKATNVHKIIGTNPCADNNGGCS
HLCLYKPQGVQCACPIGLELISDMTTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
TGRITIVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQGGWNACASTNGHC
SHLCLAVPISGYICGCPAHYSLNSDNKTCSAPTSFLLFSQKTAINRMVIDEQQSPDIILP
IHNLRNVRAIDYDPLDKQLYWIDSRQNALRRAQEDGNQSFTVVASPVPNQNLEMQPYDLS
IDIYSRFIYWTCEATNVINVTRIDGRPVGIVIRGEHDKPRAIVVHPERGYMYFTNLQERS
PKIERAALDGTERELLFFRGLGKPIALAIDNEMGKLFWVDSDLRRIESSDLAGANRIVIE
DSNILQPVGLTVFGNYLYWIDKQQQMIERIDKTTREGRTKIQARIASLSDIHAVSELDMR
EYRKHPCTQDNGGCSHICIIKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPDQFSCLSGE
VDCIPRAWRCDGYPECGDKSDEESCPVCSDSQFQCDSRQCIDMTLRCNGEANCQDKSDEK
KCEVNCPVDQFSCANGQCIGKHKKCDHNTDCNDNSDELGCYPTEEPSPQPTNTIGSIIGV
ILALFVVGAMYFVCQRVLCPRMKGDGETMTNDFVVHGPSSVPLGYVPHPNSLSGSLPGMS
RGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFDYSSNSPSTHRSYSFRPYNYRHFAPPTTPCSTDVCDSDYTPSRRITTAVIKGYTSDLN
YDSEPFPPPPTPRSQYLSAEENYESCPPSPFTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgttctacggagcctgctgttgtgtagtttttgttctttaataagagggacg
ccattgttactttatgcaaatcgcagagacctgcgattggttgatgctgccagcgggaaa
ggaaacgccactgtggtggttggtggcttggaggatgcagcagcggtggacttcatctat
tcaatgggtttaatatactggagtgatgtgagcgaagaatccattaaaagaatagtgttt
aatcaaactgcaagtttacagaacgttgtggtgtcggggctggtatcgcctgacgggctc
gcttgcgactggttgggaaagaagttatactggaccgactcggaaaccaatcggattgag
gtttcgaatctagatggatctttgcggaaagttttattttggcaagatatggatcagcca
cgagcaattactttggatccagcacgagggtacatgtattggactgattggggagaagta
ccaaaaattgaaagagctggcatggatggtacgagccgatcaatagtaattgacagcaat
atttactggccaaacgggctgacgttggactacgctgaacagaaactgtactgggccgat
gccaagtttaatttcattcacaggtcgagccttgatgggaaagccagggaaccggtggta
gaaggctctctcccgcatccctttgcattgaccctgtatgacgaaacgctgtactggaca
gactggaacacgcactcaatccactcctgcaacaagatcacaggagacaagcgacaagaa
gttcacaccaatatcttctcccctatggatattcatgtcttcagccagaaaagacagccc
gaatctctgagtccctgtggaagtaataatggtggctgctcccacttgtgtctgatgtcg
ccgatgaagcctttttatcagtgtgcctgtccaaccggggtgcggctgctggaggacgga
aagacctgcaaagacggagccacagagctgttgcttcttgctcgccgcacagacttgaga
cggatatccctcgacaccccagatttcactgacattgttctaaaactggacgacatacgc
catgccatagccattgactacgaccctgtggatgggcacatatactggactgacgacgag
gtgcgagccattcgcaggtcctatctggatggttctgagagtcagtttgtggtcacgtct
caagtgagccacccagacggcatcgctgtagattggattgccaggaacctttattggacc
gatactggaacagaccgcatcgaagtgacgagacttaacgggaccatgcgcaagatcctc
atttcagaggaccttgacgagccaagagcaatagtactggatcctatgtctgggtatatg
tattggacagactggggagagattcctaagatcgagcgtgctgcattagatggcaccgac
agactaattctggttaacacttcactaggctggccgaatggactggcgctggactacgtt
gagaataagatctattggggagatgccaagactgacaaaatcgaggttatgaacacagat
ggatctggtcggaaagttctggtggacgataaactgccgcacatttttgggttcacatta
ctgggggattatatctactggacggactggcagcggcgtagcattgagcgagtgcacaag
cgctctgctgagcgtgagatcatcatcgaccagctgcctgacctcatgggtctgaaggcc
actaatgttcataagattataggtacaaacccctgcgcagacaacaatgggggctgcagt
cacctctgcctgtacaagccccagggtgtgcagtgcgcctgccccattggcctggagctg
atcagcgacatgaccacttgcattgtccctgaagccttcctcctcttctcccgccgggct
gacatccggcgcatttccctggaaaccaacaacaacaacgtggctattcccctgactggc
gtgaaggaggcttctgccctggacttcgacgtgactgacaaccgcatctactggacagac
attaccctgaagaccataagccgggcattcatgaatggcagtgcccttgaacatgttgtt
gagtttgggctggattacccagaaggcatggcggtagactggttgggcaagaacctgtac
tgggcagacactggcaccaaccggatagaggtagccaagttggatgggcagcaccggcaa
gttctggtatggaaagatctggacagtccaagagcactggctttggaccctgctgaaggg
tttatgtactggacagagtggggtggaaagccaaaaattgaccgcgctgccatggacggg
acggggcgcatcactattgtgcccaacgtgggccgcgcaaacggcctcaccattgactat
gctgaacgaagactttactggacagacctcgataccacgttgatcgaatcctccaatatg
ctaggtctggagcgtgaagtcattgcagatgacttgccccacccatttggcctgactcag
taccaggattacatttactggacagactggagccggcgcagcatcgagagagccaacaag
accagtggccaaaaccgcaccatcattcagggccatttggattatgttatggacatcctg
gtctttcactcctcaagacaagggggctggaacgcatgtgcttccaccaacgggcactgt
tcccatctctgcctggccgtgcccatcagtggttatatctgtggatgtcctgcccactac
tccctcaactctgacaacaagacctgcagtgctcccacctccttcctgctgttcagtcag
aagacagcaatcaaccgtatggtgatcgatgagcagcagagtcctgacatcatcctgccc
atccacaacctgcgcaacgtccgagccattgactacgaccccctggacaaacagctgtac
tggattgactcccggcagaacgccctcagaagagcgcaagaagatggcaaccagagtttt
actgtggtggccagcccagtgcccaatcagaacctagaaatgcagccatacgacctgagc
atcgacatctacagccgtttcatctactggacctgcgaggccaccaacgtcatcaacgtc
acccgcatagacggcagaccggtgggcattgtcatccgaggagagcacgacaagcccaga
gccattgtggtccatcctgagagagggtacatgtactttactaacctgcaagagaggtct
cccaagattgagcgagcagcattggatgggacagagagggaactactgttcttcagaggc
ctcgggaaacccattgccctcgctatcgacaacgaaatgggcaaactgttctgggtggac
tctgacctgcggcgcattgaaagcagcgacctggcgggtgccaaccggattgtaattgaa
gactcaaacatcttgcagccggttgggctgactgtgtttggaaactacctgtattggatc
gacaagcagcagcaaatgattgagagaattgataaaaccacacgggagggacgcaccaag
attcaagctcgcatcgcctcgctgagtgacatccatgcagtgagcgaactcgacatgagg
gagtacaggaagcatccttgcactcaagacaatggtggctgttcacatatttgcattatt
aaaggggatggtaccacccgctgctcctgccctgttcaccttgtactgctgcaggatgaa
ctctcctgtggagaacctccgacctgttccccggaccagttctcttgcttgagtggtgag
gtggactgcatcccacgagcatggcgctgcgatgggtacccggagtgtggcgataaaagt
gacgaggagagctgtccagtctgctccgacagccagttccagtgcgacagccgacagtgc
atcgacatgaccctgcgctgcaacggggaggcgaattgccaggacaagtcagacgagaag
aagtgcgaagttaattgtccagttgaccagttcagctgtgcaaacgggcagtgtataggc
aagcacaagaaatgtgaccataacactgactgcaacgataactccgatgaactgggctgc
taccccacagaggagccatctcctcagccaacaaacaccattgggtccatcatcggagtg
attctggccctgttcgtcgttggtgccatgtacttcgtgtgtcagcgtgttctgtgtccg
cgcatgaagggtgatggagaaacgatgaccaatgactttgtggtccacggcccctcttct
gttccactgggatacgttccacacccaaactccctctccgggtctctaccaggaatgtct
cgagggaaatctgtcattagctcattaagcatcatgggtgggagcagcggaccaccctac
gacagagcccacgttaccggggcctcctccagcagctcttcaagtaccaaaggcacttac
ttccctccgattttaaacccccctccttccccagccactgagcgttcccattacaccatg
gagtttgattactcatcaaacagcccttctacacacaggtcatacagcttccgaccttac
aattaccgccacttcgctccccccaccaccccgtgcagcacggatgtttgcgacagcgac
tacacccccagcagaaggatcacgacagctgtgataaagggctacaccagcgacctgaac
tatgactctgagcccttcccacccccacccacaccacgtagccagtacctgtctgcggag
gagaactacgagagctgccccccatcccccttcacggagcgcagctactcccaccacctc
tatcctccacctccctccccctgcacagactcttcgtga
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integrated database retrieval system
