KEGG   Acipenser ruthenus (sterlet): 117419960
Entry
117419960         CDS       T07327                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03013  Nucleocytoplasmic transport
arut03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117419960
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117419960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:arut03016]
    117419960
Transfer RNA biogenesis [BR:arut03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    117419960
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 117419960
NCBI-ProteinID: XP_033889282
LinkDB
Position
14:25084491..25107605
AA seq 936 aa
MEGGKPSLELVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEIADQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPAETHISLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQMA
SWKGCVHTLIEKYSNDVSSLLFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLMSCVEKTGSNEKMLIKAFRCLGSWFNLGVLDSNFMANNQLLIVLFQVLQRDDTSTN
LHEAASDCVCSSLYAIENVDNNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETIVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTSDPV
LHGLFRPFIQRLLHALARHCQLDPDHEGVPEDTDDFGEFRMRVSDLVKDLIFLVGSMECF
TQLYATLKDGNPPWEVTEAVLFIMAAIAKSIDPENNPTLTEVLEAVVHLNQNVHIAVRYT
SIELVGEMSEVVDRNPQFLDPVLNYLMKGLREKPLSSVAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSADAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVIALKKLLSQEA
SNGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHQADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCQQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFIQRSPVTLLRSQIIVHIIQCA
IAATSLDHRDANCSVMKFMRDLIHTGIANDHEDDFELRKQLIQQAMSQNGQQLVNQLINT
CCFCLPPYTLPDVAEVIWEIMLFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHK
QVTRTVPLTAQCPTLSSAEDCKHVCWALRDFTRLFR
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggagggtggcaaaccgtcccttgagctggtttatcaggccgtgcaggctctttatcac
gacccggaccccgccggcaaagagcgagcctctgtctggctcggagaactgcagagatcg
atgtatgcatgggagatagcggatcagctcctgcaactaaaacaagacgtggagtcctgt
tatttcgcagcacagacaatgaagatgaaaatccagacctcattttatgagcttccagca
gaaacgcacatctccctgagggattcactgctgtcacacatacagaacctaaaggacctc
tctcctgtcattgtcactcagcttgctctagcaatagccgaccttgccctgcagatggca
tcttggaagggatgtgttcacacacttattgaaaagtacagcaatgatgtgtcctcactt
ttattcctgattgaaatcctcactgttctgcctgaggaagtgcacagtcggtccctgcga
attggtgccaaccgccgcactgagatcattgaggacctggcctactactcaagcactgtt
gtaactctactgatgtcctgtgtggagaaaactgggagcaatgaaaaaatgctgataaag
gcattccgctgccttgggagctggttcaaccttggtgttctggacagcaactttatggca
aataaccagctgcttattgtacttttccaggtgctgcaaagggacgatacctccaccaac
ctgcatgaggcggcctcagactgtgtgtgttcatctctgtacgccattgagaatgtagac
aacaacctgcccctagcaatgcaactattccaaggggtcctaacgctggagacagcatac
cacatggctgtggcacgggaggacttggacaaagttttgaattattgtcgcattttcacg
gaattgtgcgagacctttctggagacgatagtaaggagtcctggtcaaggaatgggagat
ctacgaacactagagttgctgctcatctgtgcaggacacccacagtatgaagtagtagag
atctcctttaacttctggtataggctaggggagcacctatataaaaccagtgacccagtg
cttcatggactttttcgaccattcatccaacgattgttgcatgcactggcaaggcactgt
cagctagaccctgatcatgaaggagtacctgaagacacagatgattttggagagttccgg
atgagggtctcagatcttgtgaaggatttgattttcttggttggatccatggaatgtttc
acgcagctctatgccactttaaaagatggtaatccgccatgggaggtgactgaggcagtg
ctctttataatggctgctatagcaaagagtattgatcctgagaataatccaactcttaca
gaagtgcttgaagcagttgttcacctcaatcagaatgtacacatcgctgtcagatacacc
agtattgaactggttggagagatgagtgaagttgttgaccggaatcctcaatttttagac
ccagtgcttaattatctaatgaaggggctgagggagaagcccttgtcgtctgtagctgct
aaagcaattcacaacatctgctcagtgtgccgtgatcacatggctcagcacttccagggg
ctcttggacatcgcccggtcccttgactcttttgcactgtcggcagatgcagctgttggg
ctcctgaaaggaacagcattagttctagccaggctccctctagagaagatagcagaatgt
ttaagtgatctgtgcgcagttcaagttatagcccttaaaaagcttctgtcacaggaggca
agtaatggtaaatcttcagatcccactgtgtggctagatagattagcagtaatattcagg
catacaaaccctattgtagaaaacggacaaacccatccatgtcaaaaagttattcaagaa
atctggcctgtcttgtcggaaaccttgaacaagcaccaagcagataaccgcatcgtggaa
cggtgctgtcggtgcctgcgctttgcagtgcgctgtgttgggaagggctcagctgctctc
ctgcagcctcttgttactcagatggttagtgtttatcaggtgtacccacactcatgtttc
ctgtatttggggagtattctggtggatgaatatggaatggaggagggctgtcaacaagga
ctgcttgacatgctacaggctctgtgtatgcccactttccagttgctggaacagcctaat
ggtcttaggaatcacccagacactgtggatgatcttttccgattggcaacgaggtttatc
cagcgaagtcctgtcacacttctgcgtagccaaattatagttcatattatccagtgtgcc
attgctgccaccagccttgatcatagggatgccaactgcagtgttatgaagtttatgcga
gatctgatccacacaggcatcgccaatgaccatgaagatgactttgagctgcgcaagcag
ttgattcagcaggctatgtcccagaatgggcagcagttggtgaaccagctgattaacaca
tgctgtttctgcctgcccccctacactctgcctgacgtggctgaggtaatctgggagatc
atgctctttgaccggccgacattttgccgctggctagaaaatgcattgaagggactccct
aaagagacatcgggtggagcagtgacagtgacacacaagcaactcacagacttccacaaa
caagtaaccaggacagtaccccttacagcacagtgccccaccctcagcagtgctgaagac
tgcaaacatgtgtgctgggctttaagagacttcaccagactgtttcgatag

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