Acipenser ruthenus (sterlet): 117420041
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Entry
117420041 CDS
T07327
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117420041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117420041
Transporters [BR:
arut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117420041
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GFIT
Motif
Pfam:
SNF
Rer1
Motif
Other DBs
NCBI-GeneID:
117420041
NCBI-ProteinID:
XP_033889432
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Position
14:7845740..7867977
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AA seq
621 aa
AA seq
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MDRPQETLPNNVAGDSEALRLEKGLQGEEEGVMERGKWENKMEFMLSMAGEIIGLGNVWR
FPYLCFKNGGGAFLIPYLIFLFFCGIPVFFLETSLGQYSSEGGVTAWRKICPLFEGIGYA
SQVIVTYLNIYYIVILSWAIFYLFNSFSATLPWSTCDNTWNTKSCKEFFNWNDTDTNTSM
NFDTNIDMGFRDFVKRSPEVEFWENRVLGKSPGIEHMGRLRWDLALCLLLAWILCYFCIW
KGVKSSGKVVYFTATFPYVMLLILLLRGLTLPGAWEGIKFYIYPDINRLRDPMVWLDAGT
QVFFSYAVCQGCLTALGSYNKYNNNCYKDCLALCLLNSGTSIVAGFAVFSVVGFMAYQQG
EDISNIALSGPGLAFIAYPKAVTMLPLSQLWACLFFLMIIFLGLDSQFVCVESLATAITD
MYPGVFRKERRRELLILGIAVVCFLLGLFLVTEGGIYILELIDSCGTSGLCLLFIAFFES
ICIGWVYGADRFYDNIEDMIGYRPAPLIKYCWLFFTPAICAVTFILYLFRGAWFSSSEGP
GWSMALGWVFTLSSVVCIPIFIVYALASTQDLRKLIVPSSSLRQVSPNKSRLTLCSKVVF
YGNSLGPSLEERLATEKETGF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggatagaccacaagaaactctcccaaacaatgtagctggagattcagaggccctccgt
ctggagaaaggcttgcagggggaagaagagggtgtgatggagagaggaaagtgggagaac
aaaatggagttcatgctttccatggcgggagaaatcattggtctggggaacgtgtggagg
ttcccctacctgtgcttcaagaatggaggaggagccttcctcatcccctacctcatcttc
ctcttcttctgcgggatcccggttttctttctggagacgtctctaggacagtacagcagt
gaggggggagtcactgcctggaggaagatctgccctctctttgaaggaattggctatgca
tcgcaagtgattgtgacctacctgaatatctactacattgtcattctgtcctgggctatt
ttctacctcttcaactcttttagtgccacactgccctggtctacctgcgataacacctgg
aatacaaaatcatgcaaggaatttttcaattggaatgataccgacacaaacaccagcatg
aactttgataccaatatcgatatgggattccgggattttgtgaaaaggagccctgaagtt
gagttctgggagaaccgtgttctgggcaagtccccagggatagagcacatgggcaggctg
cgctgggatctcgccctctgcctcctgctggcttggatcttgtgctacttctgcatttgg
aaaggagtcaaatccagtggcaaggtggtttacttcacagccaccttcccctacgtgatg
ctgctcatcctgctgctgcgaggactgaccctgcccggggcctgggagggaatcaagttt
tatatctaccctgatatcaacagactcagagacccaatggtgtggctggatgctggaacc
caggtgttcttttcctacgctgtgtgccagggctgcctgactgcattaggaagctacaac
aagtacaacaacaactgctacaaggactgcctggctctgtgtcttctcaacagtggaacg
agtattgtggctggctttgctgtcttctccgtcgtgggattcatggcctaccagcagggg
gaggacatttccaacattgccttgtccggtcctggactggccttcatagcataccctaaa
gcagtgacaatgctgcccctttcccagttatgggcttgcctcttcttcctcatgatcata
tttcttggtcttgacagccagtttgtgtgtgttgagagcctggcgaccgccatcacagac
atgtaccctggagtgttccgcaaggagagacgacgagagctgctcattctggggatcgct
gtggtgtgctttctactgggcttgttcctggtgaccgagggaggaatctatatcctggag
ttgatcgactcctgtggtacaagcggtctgtgcttgctgttcattgccttctttgaaagc
atctgtattgggtgggtctatggtgctgaccgtttctatgacaacattgaagatatgatt
ggttaccggcctgcccccctgattaagtactgctggttgttcttcacacctgctatttgt
gctgtcacattcattctgtacttgtttagaggggcgtggttttcatcctccgaggggcca
ggctggtccatggcactgggctgggttttcaccttgtcctcggtggtctgcatccctatt
tttattgtgtatgccttggccagcacacaggacctgagaaagctgattgtgccttccagc
agtcttcgacaagtgagccctaataaatccagactgaccctgtgcagtaaagtggtcttc
tatgggaactctctggggcccagtctggaggagcgcctggcgacagagaaggagacaggc
ttctga
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