Acipenser ruthenus (sterlet): 117420415
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Entry
117420415 CDS
T07327
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117420415 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117420415 (neil3)
Enzymes [BR:
arut01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117420415 (neil3)
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117420415 (neil3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Zn_ribbon_RanBP
Fapy_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
117420415
NCBI-ProteinID:
XP_034784549
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Position
1:56438545..56451649
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AA seq
588 aa
AA seq
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MVEGPGCTLNGEKIRAKVKKGQKVKEIRKGTLSTSLNDPKGSQRGSFHIFTRMPVHGVET
LGKELFMYFGQKALRVHFGMNGSMRINPSERKDRSGAPPILEIQLTNDVVFFFDSTVDIR
LTAECEQKIRCMEDLDVCSPKFSFSRAEDEVRKQRGRMLCDVLLDQAVLPGVGNIIKNEA
LFDSGLHPAVKVGHLTDDQIHHLVKMTRDFTILFYKCRKTGCALYKHYKVYKRPNCGQCS
GQITVCRLGENGRMTYFCSCCQKENPCQVNVGKLPVRNSLIAWAYGAGTQSKDQVAKKEE
EEWTCALCTLINKPTAKSCNACLTSRPEIPKVEISEEPSALTRDLIKFPCNAFTKSEVDL
KVNRKAAFGTSTLIFTDLSCKSAPSQSTTSVNNVLTSSFGSSITDSSFNKHNFNQRKTSS
NYSNSRKKSLEVSDKDKSDLYHQPQKKMKTDHNSFSITKGHYGNHNSTLSEPRVNMTDGT
ALLSHGSPCCATHNRPSILRVVKKDGENKGRQFYACSLPRETQCEFFMWADSHFPTCNHA
KRCLMRTVLKIGPNNGRNFYVCPLGKNKQCDFFQWAENGPGIKIIPGC
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaggaccaggttgcaccttaaatggagagaaaattcgcgccaaagtgaaaaaa
ggacagaaagtgaaagagattagaaaaggcacattgtcaacttcactaaatgacccaaaa
ggttcccagcgaggttcatttcacattttcacaaggatgccagttcacggggtggagact
ctcggcaaagagctgttcatgtactttggtcaaaaagcattaagagtacattttggaatg
aatggctctatgcgtatcaacccatctgagagaaaggacagaagtggcgcaccacccatt
ttggagatccagttgactaatgacgttgtgttctttttcgattcaactgtagatatcagg
ctcacagctgagtgtgaacagaagattaggtgtatggaggacttggatgtttgctctcct
aaattcagtttctccagagcagaagatgaggttagaaagcaaagaggtcgtatgctgtgt
gatgtgctgctagatcaggcagtcttaccaggtgtggggaacatcatcaaaaatgaagcc
ctttttgacagtggcctgcatcctgctgtcaaagttggccatttgacagatgaccagatc
caccatcttgtgaaaatgacccgagattttaccattcttttttacaagtgccgtaagact
ggttgtgcactctataaacattataaagtatacaagcgccctaactgtggtcagtgcagt
ggacaaatcactgtgtgtcgacttggggagaatggcagaatgacctacttttgttcttgc
tgccaaaaggaaaacccatgccaggttaatgttggcaaacttccagtcagaaatagttta
atagcttgggcttatggagcaggtactcagtctaaggatcaagtggccaaaaaggaggag
gaagaatggacttgtgcactctgcactttgataaacaagcccactgctaaatcatgcaat
gcatgtttgacgtcaagaccagaaattcctaaagtggagatttctgaggagccatctgcc
ttgactagagacctgatcaaattcccctgcaatgcctttaccaagtcagaagtggatctt
aaagttaacagaaaggctgcatttggaacctctacacttatttttacagatctgagctgt
aaatctgccccttcacaaagtactacttcagttaacaatgttttaacttcatcttttggg
tcttccatcacagatagcagcttcaataagcataactttaatcaaaggaagaccagttct
aattattcaaactctaggaaaaagagcttggaagtgtctgacaaggacaaatctgattta
taccatcagccacaaaagaaaatgaaaactgatcataattcattttctattactaaaggg
cattatggcaatcacaattctacactcagtgagcctcgtgttaacatgacagatggaaca
gctctgttaagtcatggaagtccatgctgcgctacacataatcgccccagtattctaagg
gttgtgaagaaggatggagaaaacaaagggagacaattctatgcttgttctttacccaga
gaaacccagtgtgaatttttcatgtgggctgattcacacttccccacctgtaatcatgca
aaacgatgcctcatgagaacagttctgaagattggcccaaataatggacgaaatttttat
gtctgccctttaggaaagaacaaacaatgtgacttttttcagtgggcagaaaatggtcca
ggaatcaagataatccctggatgctaa
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