Acipenser ruthenus (sterlet): 117420421
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Entry
117420421 CDS
T07327
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117420421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117420421
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117420421
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Zip
Ion_trans_2
NPR3
Tim54
Connexin
CIS_TMP
PFF1_TM
Sec62
DUF4614
Vfa1
Motif
Other DBs
NCBI-GeneID:
117420421
NCBI-ProteinID:
XP_033889764
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All DBs
Position
1:21255703..21265502
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AA seq
644 aa
AA seq
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MTSVINTHQTYLRPPRIVLPGMDEELERMESGESRDQYLPGSVAQYNTNRSNNKDEEEKK
KKKKDKKRKLEGKKEKKKEKKDKKEKEGKEKEKEKEKEKEKKEEPKKEVFVIDPAGNIYY
NWLFVITVPVMYNWTMIIARACFEELQHDYITTWFIIDYVSDVIYLADMFFRTRTGYLEQ
GLLVKDEQKLRQRYVTSVQFRLDLVSMIPTDFLFFKTGLNYPELRLNKLFRVPRMFEFFS
RTETRTNYPNIFRISNLVMYIVIIIHWNACLYFSFSKAIGFGEDTWVYPNVSDPEFGRLV
RKYAYSLYWSTLTLTTIGETPPPVQDSEYFFVVIDFLVGVLIFATIVGNVGSMISNMNAA
RADFQARIDAIKQYMHFRKVDKDLEKRVIKWFDYLWTNKKAVDERDVLKYLPDKLRAEIA
INVHLDTLKKVRIFADCEAGLLVELVLKLRPQVFSPSDYICRKGDIGREMYIIKEGKLAV
VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALT
EYPDAKAMLEEKGRQILMKDGLLDLDVAALGPDPKDMEEKVTRMYSSLELMQTKFARLLA
EYDVSQQKLKQRITGIEKKLTLSREFVLSELVDPEAATAEGEKE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacctcagtaattaacacccatcaaacttatctgaggcctcccaggatagtcctacca
ggcatggacgaggagctggaaaggatggaaagtggggaatccagggatcaatacctacct
ggttcggtggctcaatataacactaaccgcagcaataacaaagatgaagaggagaaaaag
aaaaagaaaaaagataaaaagagaaaattggaagggaaaaaggaaaagaaaaaggaaaag
aaagataagaaagaaaaggaggggaaggaaaaagagaaggagaaagaaaaagagaaggag
aaaaaggaggagcctaagaaggaagttttcgttattgatccagcaggaaatatatactac
aactggttatttgttataacagtgcctgtgatgtacaactggaccatgatcatagccaga
gcatgttttgaggagctacagcatgactacataaccacttggttcataatagactatgta
tcagatgtcatttacctggctgatatgtttttcaggacaagaacaggttatctggagcaa
ggtttgctggtcaaagatgagcaaaagctacgtcagcgatacgtgacaagtgtacaattt
agactggatttggtgtcaatgataccaactgattttctgttcttcaaaactggactaaac
tacccggaactgagattaaataagctctttcgagttccccgcatgtttgagttcttctca
agaacagaaacgagaaccaactatcccaacatcttcagaatctccaacctggtcatgtat
attgtgattatcattcactggaacgcgtgcctttacttctccttttccaaagctatcggc
tttggagaagatacctgggtctacccaaatgtgtcggatccagagtttggccgacttgtc
cggaaatatgcttacagcctttactggtccactctgacccttaccaccattggagaaacc
cctcctccagtccaagactctgagtacttctttgtagtcattgacttcttggttggagtg
ttgattttcgctaccattgtcggcaatgtgggttccatgatttccaacatgaacgctgcc
agagcagatttccaggccaggattgatgccatcaagcagtacatgcactttcgaaaggtc
gacaaagatctggaaaagagagtcatcaaatggtttgattatttgtggacaaacaagaaa
gcagtggatgaaagagatgtcctgaaatatctcccagacaagctgcgtgcagagatcgcc
atcaatgtccaccttgacacgctaaagaaagtgcgtatctttgcagattgtgaggccgga
ctactggttgagctggtgttgaagctaaggccacaggtctttagcccgagtgattacatc
tgtcgcaaaggggacattggcagggaaatgtacatcatcaaggaaggaaagcttgctgtt
gtggcagatgatggaattacacagtttgtggtccttagtgatggaagctactttggggag
atcagtatcctaaacatcaagggaagtaaagctggaaaccgcagaacagctaacattcga
agtatagggtactctgacttgttctgcctgtccaaggatgacctcatggaagctctcaca
gagtacccagatgcgaaggcaatgctggaggagaaaggaaggcagattcttatgaaggat
ggactgttagatctagatgtggctgcactcggtcctgacccgaaagatatggaggaaaaa
gtcacccgaatgtattcatccttagagctcatgcagactaagtttgccaggctgttggct
gagtatgatgtaagccaacagaagctgaagcagagaatcaccggtattgagaagaagcta
acattaagtagggaattcgtactttctgaattggtggatccagaagctgccacagctgaa
ggtgaaaaggagtaa
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