Acipenser ruthenus (sterlet): 117420505
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Entry
117420505 CDS
T07327
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117420505 (tmc1)
03037 Cilium and associated proteins [BR:
arut03037
]
117420505 (tmc1)
Transporters [BR:
arut02000
]
Other transporters
Pores ion channels [TC:
1
]
117420505 (tmc1)
Cilium and associated proteins [BR:
arut03037
]
Other cilia and associated proteins
Stereociliary proteins
117420505 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
SpoIIIAH
UPF0542
DUF6377
Toddler
Motif
Other DBs
NCBI-GeneID:
117420505
NCBI-ProteinID:
XP_034777808
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All DBs
Position
1:77420038..77438927
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AA seq
670 aa
AA seq
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MKRKLTTLKEAHEFVDKFEGSLGKGKGKKFYAYKVMMQKKWMKFQRDFENFRTACIPWEM
KIKEIESHFGSSVASYFIFLRWMYGINMVLFGLTFGLVMVPEALMGKPYGSMPRKTVPKS
EQATAMDFSILWDFGGFSQYSVLFYGYYNNQRAVGWLKFRMPLSYFMTGVGTIAYSFMVV
IRTMASNANEEGGGDDTSFTFSWKMFTSWDYLIGNPETADNKFASITTSFKESIVEEQEN
RKEENIHLTRFLRVLANFLVLCCLGGSGYLIYFVVRRSQKFAQEGLDDYGWWERNEVNMV
MSLLGMFCPMLFDVISALENYHPRIALQWQLGRIFALFLGNLYTFIIALLDEINLKLEEE
AIVKINMTIWEASLYNGTVAENATAPPLEVDPADVPRGPCWETMVGQEFVRLTVSDTVTT
YITLLVGDFLRALFVRFLNYCWCWDLEYGFPSYAEFDISGNVLGLIFNQGMIWMGAFYAP
CLPAINVLRLHVSMYLQCWAVMCCNVPHARVFKASGSNNFYIAMLLVILFLSTLPAVYTI
VSIPPSFDCGPFSGKHRMFDVIQETLDNDFPAWFGKVFGYASNPGLILSFILLMVLAIYY
LHATSKSYKTANLELKKKLQNQKEESKKKNKKVAEKTALDLQEAKSSQLKQDNSTKVGEE
CAQEARLLPG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaagctgacaactctcaaggaagcccatgaatttgtggataaatttgaaggt
tcccttgggaagggaaaaggcaaaaaattttatgcatacaaagtgatgatgcaaaagaaa
tggatgaagtttcaacgtgattttgagaatttcagaacagcctgcataccatgggaaatg
aaaataaaagagatagaaagtcattttggttcctcagttgcctcctatttcattttcttg
agatggatgtatggaatcaatatggttttgtttggtttaacatttggccttgtcatggtg
cctgaggcactgatgggtaagccgtatggcagtatgccaagaaaaactgtccctaaaagt
gaacaagccacagctatggacttttccattttatgggattttgggggtttttcacagtac
tctgttctgttctatggctattacaacaaccagcgtgctgtgggatggcttaagtttcgt
atgcctttgtcctactttatgacaggagttggaacaattgcctatagcttcatggtggtt
ataagaacaatggcaagtaatgcaaatgaagagggtggtggagatgacacaagctttacc
ttcagctggaaaatgttcaccagctgggattacctaatcgggaatcctgaaacagctgac
aacaaatttgcttctattaccacaagttttaaggaatctattgtagaagagcaagaaaat
cgtaaggaagagaacatccatttaacccggttcctgcgggtgcttgctaacttcctagtg
ctctgctgccttggtgggagtgggtacctcatctatttcgtagtgcgaaggtctcagaag
tttgctcaggaggggctggatgactatggttggtgggagagaaatgaagtaaacatggtg
atgtccttgttgggaatgttctgtccgatgttgttcgatgtcatcagcgcgctggagaac
tatcaccctcgaatcgctcttcaatggcagctgggacgcatctttgctctgtttctgggc
aatctgtacacattcatcattgctctccttgatgaaataaatctgaagctggaagaggag
gcgatagtcaagatcaatatgacaatatgggaggccagcctttacaatggaactgtggca
gaaaatgctacagctcccccactagaagtggaccctgctgatgtgcctagaggaccatgc
tgggagactatggttggacaggaatttgtgcggctaactgtttctgatacagtgacaact
tatatcacactgttggttggagacttcctgcgggctttgtttgtccgatttctcaactac
tgctggtgctgggacttagaatatggatttccatcctatgcagaattcgatatcagtggg
aatgtactgggactgatcttcaaccaaggaatgatttggatgggtgccttttacgctccg
tgccttccagccatcaatgttcttcgtcttcatgtatccatgtatctgcagtgctgggca
gtaatgtgctgtaatgttcctcacgcgagggtgttcaaggcctctggatccaataacttc
tatatagccatgctgcttgttattctctttctttcaacgctacctgcggtgtataccatt
gtctcgatcccaccctcctttgactgtggcccctttagtggaaaacacaggatgtttgat
gttatccaagagacactggataatgacttccctgcctggtttggaaaagtgtttggctac
gcctccaatcccggactaattctttcttttatactgctcatggttttagcaatctattat
ctgcatgctacctccaagtcatacaagactgccaatcttgaattaaagaagaaactgcaa
aatcaaaaagaggagagtaaaaagaagaacaaaaaggtagcagaaaagacggcacttgat
ttacaagaagctaagagcagtcaactcaaacaagacaacagcacaaaagtgggagaggaa
tgcgcccaggaggcccgcctcctccccggatag
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