Acipenser ruthenus (sterlet): 117420666
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Entry
117420666 CDS
T07327
Name
(RefSeq) poly(A) polymerase type 3-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117420666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117420666
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117420666
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117420666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
DUF4269
Polbeta
Motif
Other DBs
NCBI-GeneID:
117420666
NCBI-ProteinID:
XP_034761531
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All DBs
Position
24:5303546..5318843
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AA seq
740 aa
AA seq
DB search
MPFPVVNQVLQAAQQPTKHYGITSPISLTQPKEADLILTQKLTEALKPYGVFEEELELQR
RILVLGKLNSVVKEWIRDMSETKHLPSSIIENIGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYEKLKEQEEVKDLRAVEEAFVPVIKLSFDGIEIDILFARLALQTIPG
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLHLPVW
DPRVTPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILQNKAEWPK
LFEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQS
FPGPKERNDKEEFSTMWVIGIVFKKMESSENLNVDLTYDIQSFTDTVYRQAINSKMFEPD
MKITAMHVKRKQLHQLLPNLVIQKRRKHSTEGIKLMNENSFDLSLDSDNSMSVPSPTAAL
KSCSQNHSTSPQGRLSPTTSVTNTQSEAQAKPEAGGNSVIPGGILGENILKPPAAPLALK
PSLTCVSSTQVINQAPQPAGTPGTKPGIKRAGSPHPEETPKRLKADEETENSLSADICAV
PPDTKMSTEMEVGEVVSSKNAGEGDMETKDNVKELDSEERLDPPIPAAQRLSSTDLSDVP
TLPPNPIPVVKNSIKLRLSR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccctgttgtaaatcaagtactacaagcagcacagcagcccacaaaacattat
ggtatcacttctccaattagtcttacccagcccaaggaggctgatttgattctgactcag
aagctcactgaggcactgaaaccttatggggtttttgaagaagagttggaactgcagcgc
agaattttagtcttgggaaaactaaacagtgtggttaaagaatggatcagagacatgagt
gaaacaaagcatttgccttcctctattattgagaacattggaggaaagattttcaccttt
ggttcctatcggttaggagttcacacaaaaggtgctgatattgatgctctctgtgtggcc
ccacgtcatgtggacagatctgacttcttcacatcgttttatgaaaagctcaaagaacaa
gaggaagtcaaggatttaagagctgttgaagaggcttttgtaccagtaataaaactatca
tttgatggcatagagattgatattctatttgcccgattagctctacaaactattcctgga
gacctggaccttcgagatgacagtttacttaaaaatttagacatcaggtgcataagaagt
cttaatggttgccgagttactgatgagattttgcatttggtaccaaacattgaaaacttc
agacttaccctcagggcaataaaattatgggcaaagcgtcataatatttattctaatata
cttggcttccttggtggtgtgtcatgggctatgttagttgccagaacatgccaactttat
ccaaatgctgtagcatccacacttgttcacaaattcttcctggttttttcaaagtgggaa
tggccgaatccagttcttctgaagcagcctgaggattgcaacctccatcttccagtgtgg
gaccccagggtgactccaagtgacagataccacttgatgccgattattacaccagcatat
ccacagcaaaactcaacctataatgtctcagtgtctacacgtgcagtcatgattgaagag
tttaaacagggtcttgccatcacagatgaaatattgcagaataaggcagagtggcccaaa
ctttttgaagcaccaaacttctttcagaagtacaagcattatattgtgttgctagcaagt
gcacctacagaaaagcagcacctggaatgggttggtctggtagagtcaaaaatccgtatc
ctggttggaaatttggagaagaatgagtttatcacgttagcccatgtaaacccccaatca
ttcccaggtccaaaagaaagaaatgacaaggaagaattcagcacaatgtgggttataggg
attgtatttaagaaaatggagagcagtgaaaacctcaatgttgatctcacatatgacata
cagtcattcactgatacagtttacaggcaagcaataaacagtaaaatgtttgagcctgat
atgaaaattacagcaatgcatgtcaagagaaaacaattacaccagcttctaccaaacctt
gttatacagaagaggagaaagcattcaactgaaggcatcaaactgatgaatgagaacagt
ttcgatctgtcattggacagtgacaacagcatgtcagtaccttctccaactgctgctttg
aaaagctgctctcaaaaccattccaccagtccacaaggcagactaagcccaacaacatca
gtgaccaacactcagtctgaagctcaggctaaacctgaagctggaggaaactcggttatc
ccggggggtatattgggtgaaaacattctcaagcctccagcagctcccctagccctaaag
ccctccttgacctgtgtttcatctacacaagtgattaaccaggctccgcagcctgcggga
acccctggtacaaaacctggaataaagagagcagggtctcctcacccagaggagacccca
aaaagattgaaagcggatgaggaaacagaaaacagtttatcagcagacatttgtgcagtt
ccgccagatactaagatgtctacagaaatggaggttggagaagttgtcagttctaaaaat
gctggtgaaggtgacatggaaactaaagacaatgttaaggagctggattcagaagagagg
ttagatccaccaattcctgcagcacagagactgtccagtacagacctctcggacgtcccc
actctccctcccaaccccattccagttgtgaagaactcaataaagttaagactgagtagg
tag
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