Acipenser ruthenus (sterlet): 117420682
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Entry
117420682 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin-like
KO
K04533
huntingtin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117420682
04131 Membrane trafficking [BR:
arut04131
]
117420682
03029 Mitochondrial biogenesis [BR:
arut03029
]
117420682
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117420682
Membrane trafficking [BR:
arut04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117420682
Mitochondrial biogenesis [BR:
arut03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117420682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
117420682
NCBI-ProteinID:
XP_033890105
LinkDB
All DBs
Position
1:14525158..14609758
Genome browser
AA seq
3121 aa
AA seq
DB search
MATMEKLMRAFESLKAFQQQGPPTAEELVQKQKKDPSTTKKDRVTHCLTICENIVAQSLR
NSPEFQKLLGIAMEMFLLCSDDGESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIKK
NGASRSLRAALWRFAELSHLVRPQKCRPYLVNLLPCLTRISKRPEEAVQETLAAAIPKVM
AALGNFANDLEIKVLLKSFVGNLKSSSPTIRRTAASSAVSICQHSRRTQYFYTWLLSVLL
GLMVPVEEEHPTALILGVLLTLRYLMPLLQQQVKDTSLKGSFGVTRKEAEVSPTQEQLVQ
VYELTLHYTQHHDHNVVTAALELLQQTFRTPPSDLLHALITAGSMPQVSISREETENRSR
SGSILELIAGGGSSCSPLLLRKQKGKLLSGEEEGLEDDIGTKSEVSTGTFTGSVNTESGS
EIPSSSGVSTLGSADSSGGHDIITEQPRSCQHNLQSADSVELSGASEAVSSTATASTMAG
GEGTEDEDVLSRSSSQISTSAGPSDPSNLASSPASESSQTTTEGPDSAVTPSDCSELVLD
GSESQYSGMQIGQLQDEEEEGTSHPHEAPLELFSDSTLARSKPHLLESKSHSRQPSDSSV
DRLIPKDEALESAELENKPSRIKGEIGHYTDQNAAPLVHCVRLLSASFLLNGQKNGLVPD
KEVRVSVKALAVSCVGAAAALHPEAFFNKLYRAPLEGIEPEEQQYISDILKYIDHGDPQI
RGATAILCGTIVYSILNKTRFNVESWLANVKTSTGNHVSLVDCVPLLQKTLKDESSVTCK
LACTAVRHCIMTLCSSSFSALGLQLLVDLLTLRNSSYWLVRTELLETLAEMDFRLVSFLE
RTENLHKGDHHYTGLLKLQDRVLNDVIICLLGDEDPRVRHVAATTVTRLVSRLFYDCDQG
QADPVVAIARDQSSVYLQLLMHETQPPSHFTVSTIIRTYRGFNISQNPSDVTVENNLSRV
ITAVSHALTSSTSRALTFGCCEALCLLSSAFPVCTWSLGWHCGYVTSSGTHPSRSSLYKN
RGRLFSLSQSGPTDDFRKNCTVGMAHMVLSLLSSAWFPLDLSAHQDALMLTGNLLAAAAP
KSLKKPWTAEEEANAGVNKQEEPWPALGDRTVVTMVEQLFSHLMKILNICAHVIDDVAPG
PAIKASLPSLSNTPSLSPIRRKGKEKEPIEQNAAPLSPKKITDTSPAARPADTAGATATN
KSSTLGSFYHLPPYLKLFDVLKATHANYKVTLDLQNNTEKFGGFLRSALDVLSQLLELAT
LQDIGKCVEEILGYLKSCFCREPTMATVCVQQLLKTLFGTNLASQYEGSSSNTSKSQGKA
QRLGSSNLRLGLYHYCFMAPYTHFTQALADASLRNMVQAEHEQDASGWFDVLQNVSTQLK
SNISNVTRHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVYLQRQVLDLLAQLVQLRVNY
CLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIVPNIFFFLVLLSYERYHSKQIIGIPKIIQ
LCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLIQYH
QVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHLDSHEALGVLNTLFETVA
PSSLRPVDMLLRSMFVTPATMCSVGTVQLWISGILAILRVLISQSTEDIVLSRIQELSLS
PYLISCANIERLRDYYSQTPPSEEVNGDAQGKYPPEETFARFLIQLLGIQMEDISTKQLK
VDMNEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAATKLFNGDGCEGSFYSLDNLNSM
IQSLITTHPSLVLLWCQVLLLINYTNYTWWSEVHHTPRRHSLSSTKLLSPHMSDDSDESK
PESKLAMCNREIVRRGALILFSDYVCQNLHDSEHLAWLIVNHVRDLINLSHEPPVQDFIS
AIHRNSAASGLFIQAIQSRCENLSTPTVLKKTLQCLEGIHLSQSGAVLMLYVDKFINTPF
RVLARMVDTLACRRIEMLLAETLQNSIAQLPLEELDRIQQHLQSSGLAQRHQRLYSLLER
FRATVLEDSASPSPPVTSHPLDGETPPPPESVTVDKDWYVMLVRSQCCTHTDTALLESTE
LLTKLPQPDLCSIMVSKEFNLNLLAPCLSVGLKRVSGEQGSALFETTLRVTLEQVSSSAQ
LLPSSHQVFQPLLSPGNTTYWNKLSDVYGEVGLYQTIVSLCRALTQYLLSIPKLPAALHM
PSDKEVDATKFVVLALETLSWRLISGQVPLSIDLQTILECCCLALQHPAIWCLLASAAYV
THACSFVNCIKFLIEAVAVEPGDQLLRPERKKMSRAQAAQDELDAASTERPVHIKKACET
MAELVESLQTVLALGHSRNEIIPAFLTPTLRNITISLARLPLVNSYIRVPPLVWKLGWSP
KPGGEFGTAFPEIPVEFLQEKDVFREFLYRVNTLGWTSRTQFEETWASLLGVLVTQPIVM
DHEENQHEEDLERTQINVLAVQAITSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTR
FGRKLSVIRGIVEQEIQAMVSKRDNIATHYPYQAWDPVPSLSAAATGTLISHEKLLLQIN
TEREMGNMDYKMGQVSIHSVWLGNSITPLREEEWDEDEEEESDVPAPVSPPTSPINSRKH
RAGVDIHSCSQFLLELYSQWILPNNPNNKKTPVILISEVVRSLLAVSDLFTERNQYEMMY
STLTEMQKVHPTEDEILNQYLVPAICKAASVLGMDKAIAEPVSRLLETTLRSTHMPSRIG
ALHGILYVLECDLLDDTAKQLIPIISDYLLSNLRGVAHCVNLHNQQHVLVMCAAAFYMIE
NYPLDVVPEFTAGIIQMCGVMVSGCEDSTPSVTYHCVLRGLERLLLSEQLSRPDGEALVK
LSVDRVNMPSPHRAMSALGLMLTCMYTGKEKTSPSRTSDLDPTAPDSESVIVAMERVSVL
FDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQ
TLHATGQSSMVRDWVMLSLSNFTQRTPVSMAMWSLSCFFVSASTSQWISALLPHVISRMG
KSELVDVSLFCVVGMDFYKHQIDEELDRRAFQSVFEVVASPGSPYHRLLTCLQTVPQVTA
F
NT seq
9366 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaactgatgagggccttcgagtctctaaaggcattccaacagcag
ggaccaccgacagccgaggagctagtccaaaaacagaagaaggatccttctacaaccaaa
aaagacagagtgactcattgtctcactatatgtgaaaatattgttgcacagtctctgaga
aactcaccggaattccagaaattgcttggcatcgccatggagatgttcctgctgtgcagt
gatgacggggaatcggatgtcaggatggtagcagacgaatgcctaaacaaaatcattaaa
gccctcatggattccaaccttccacgattacaactggaattatataaagagattaaaaag
aacggtgcttcaaggagcctgagagcagcactgtggaggtttgcagagctttcacatctt
gtacggccacagaaatgcaggccgtatctggtcaatctgctgccctgcctaacacgcatc
agcaagcgaccggaggaagccgtgcaggagacactggcagcagctatcccaaaggtcatg
gcagcgctcgggaactttgccaacgaccttgaaatcaaggttttactgaaatcttttgtt
ggaaatctcaagtccagctctccaactatccgccgcactgccgcaagctcagcagtcagt
atctgccagcactcgcgcaggactcagtatttctacacctggctactgagtgtactctta
ggtttgatggttcctgtggaggaggagcatcccaccgctctgatcctgggggtcctgctc
acactgaggtacttgatgcccttactgcagcagcaggtgaaggataccagtctgaaaggc
agcttcggggtcactcgcaaagaggctgaggtctcccccacccaagagcagcttgttcag
gtgtatgaactgacccttcattacacgcagcaccacgatcacaatgtggtcacggcagcc
ttggagctgttgcaacagacattccgcacgccgccctctgacctcctgcacgcgctcatc
accgctggcagcatgccccaggtcagcatctcccgagaggagacggagaaccgcagccgc
agcggcagcatccttgagctcatagccggaggggggtcatcatgcagtcctctgctactc
agaaaacaaaaaggcaagctgctctctggagaagaggaagggctggaggatgacattgga
acaaagtcggaggtcagcactggaactttcactggatcagtgaacaccgagagtggcagt
gaaatcccttcctcctcgggcgtgtcgactctggggtcggccgactcttcggggggccac
gacatcatcacagagcagcctcgctcctgccagcacaacctgcagtcggccgactctgtg
gagctgagtggggcctcggaggcagtgagcagcacagccaccgcctcaaccatggccggc
ggagagggcaccgaggacgaggacgtgctgagccgcagctccagccagatcagcaccagc
gccggcccctccgaccccagcaacctggcctcctcgccagccagtgagagctcccagacc
accaccgagggtcccgactcggctgtcaccccgtccgactgttcagagcttgttctagat
ggcagcgagagccagtactcaggaatgcagatcgggcagcttcaggatgaggaggaagag
ggcacaagccatccacatgaagcgcccctggaactctttagtgattccactctggcacgg
agcaaacctcacttgctggaaagtaagagccacagtcgacagccctccgacagcagcgtg
gatcgattgataccaaaggatgaagccttagagtcggcagaacttgaaaacaagccctcc
agaatcaaaggagagattggtcactacacagatcaaaatgctgcacctctggtccactgt
gtacgtcttctgtctgcatcttttcttttaaatggacaaaaaaatggccttgtcccagac
aaagaggtgagggtgagtgtcaaggccctggctgtgagctgcgtgggagcagcagctgct
cttcatccagaggctttcttcaataaactgtaccgagcaccactggaaggaatcgaacca
gaagaacaacagtatatatctgatattttaaagtacattgatcacggagacccccagatc
agaggagctactgcaatactgtgtggaacaatagtctattccatcctgaataaaacacgc
ttcaatgtagaaagctggttagctaatgtcaaaacttctactggaaaccacgtttccctg
gtggactgtgtgcctttactacaaaagaccctgaaagatgaatcttcagttacatgtaaa
ctggcctgcacagcagttcggcactgcatcatgactctgtgcagcagcagcttcagtgcg
ctcggcctgcagctacttgttgacctcctcaccctgaggaacagttcctattggctggtg
aggacggagctgctggaaacattggctgagatggattttagattagtaagtttccttgaa
agaactgaaaacttacacaagggggaccaccactacacggggctgctgaaactccaggac
cgggttcttaatgatgtcatcatctgcctgcttggagatgaggatcccagagttcgtcat
gtggcagccactactgtaaccaggcttgtctccaggttgttttatgactgtgatcaaggc
caggctgacccagtggtagctatagcccgagaccaaagcagcgtctacctgcagcttctg
atgcatgagacccagccaccatctcacttcacagtcagcaccatcataaggacgtacaga
ggattcaatatttcacagaatccgtctgatgttactgtggagaacaatctctccagggtt
atcacggctgtgtcccacgcactgacatcatccacttcccgagctcttacttttggctgc
tgcgaagctctgtgtctcctttcatcagcattccctgtttgtacctggagtttagggtgg
cactgtgggtatgtgacctcctccggtacccatccttccagatcaagcctttacaaaaac
agaggccgcttattcagcctgtctcagtccggccccactgatgatttccggaagaactgc
actgtggggatggcccacatggtcctgtccctcctctcctcagcctggttccctctcgat
ctgtcagcccatcaggatgcactcatgttgacaggcaacttgcttgcagcggcagctccc
aagtctctcaaaaaaccctggacagctgaagaggaggcgaatgcaggtgtcaacaagcag
gaagaaccgtggccagctctgggggaccggacagtggtcaccatggtggagcagctcttc
tctcatctcatgaagatcctcaacatctgtgcacatgtcattgatgatgtggcacccggc
cctgctataaaggcaagccttccctcactttctaatacaccatcgctgagccccataaga
agaaagggcaaagagaaggagccaatagagcaaaacgcagcgcctctgagccccaaaaag
atcaccgacaccagtccagcagccaggccagcagacacagctggggccactgcaacaaac
aagtcgtccaccctgggcagtttttaccacctccctccatacctgaaactgtttgacgtt
ctgaaggctactcacgctaactataaggtaaccctggaccttcagaataacactgaaaag
tttggtggattcctgcggtcagctttagatgttttgtctcagttgttagaacttgcaacc
ctccaggacattggaaagtgtgttgaggagatccttggatacctgaagtcttgcttctgc
agagaaccgaccatggccactgtttgtgttcagcagcttttaaagactctctttgggaca
aacctagcatctcagtatgaaggctcctcctccaacactagtaaatctcagggcaaggcc
cagcggttaggatcttccaacctgcgtcttggattgtatcattactgcttcatggctccg
tacacacacttcacacaggcgctggctgacgccagcctaaggaacatggtgcaagctgaa
catgaacaggacgcctcaggatggtttgatgttctgcaaaatgtctccacccaactgaag
tccaacatctcaaatgtaaccaggcatcgggctgataagaatgcaatccacaatcacatc
cggctatttgaacccctggttatcaaagctctgaagcagtacacgaccaccacctctgtg
tacctgcagagacaggtgctggacctgctggcacagctagtgcagctgcgggttaactac
tgtctcctggactcggatcaggtatttattggatttgttctgaagcaattcgaatacatt
gaagtgggacagttcagggattcagaggccattgttccaaacatctttttcttcttggtg
ctgctctcttatgagcgctatcactccaaacaaatcatcgggatcccaaaaatcattcag
ctgtgcgacggcatcatggcgagtggcaggaaggcggtcacacacgcaattccagcattg
cagcccatagtccatgatctttttgtgttgagagggtccaacaaagctgatgcaggcaaa
gagctggagacccagaaggaagttgtggtctccatgcttctgagactgatacagtaccat
caggtactggagatgtttatactggtgctacagcagtgtcacaaagaaaacgaagataag
tggaagagattgtcacgtcagattgctgacatcattctaccaatgctggcaaaacagcag
atgcacttggattctcatgaagccctgggggtgttaaacaccctgtttgagacggtagca
ccttcctcgctgcgtccagttgacatgctgctgaggagcatgtttgttacgccagccacc
atgtgctcggttgggacagtccagctgtggatatccggaatcctggcaatcctgcgtgtt
ctcatatcccagtcgacggaagacattgtcctgtctcgcattcaggagctctccttgtct
ccttatcttatctcttgtgccaacattgagaggctcagagactactactctcagacccca
ccttcagaggaggtgaatggagatgcacaaggcaaatacccacctgaggagacgtttgca
aggttcctaattcagctactggggattcagatggaagatatttctaccaaacagctgaaa
gtggacatgaatgaacagcagcacacattttactgccagcagctcggcacgcttctcatg
tgcctcatacacatcttcaagtcaggcatgttcagaagaatcactgcagctgctaccaag
ctgttcaacggggatggctgtgaggggagtttttacagcctggacaatctgaacagcatg
atccagtctctgatcaccactcacccctccctggtgctgctctggtgccaggtcctcctc
cttatcaattacaccaactacacctggtggtcagaggtgcatcatacacccagaagacac
agcctgtccagcactaagctgctcagtccacacatgtctgacgacagtgatgagtccaaa
ccagagtccaagctggccatgtgcaatcgggagatcgtccggaggggagcgctgatacta
ttctctgattacgtgtgccagaaccttcatgattccgaacacctagcatggctgatagtg
aaccatgtgcgtgatttgattaatctctcccatgagcctccagtgcaggattttatcagt
gccatccacaggaactctgctgccagcgggcttttcattcaggctattcagtcacgctgt
gagaacctctctacgccgactgtgctgaagaagaccctgcagtgcttggaagggattcat
ctcagtcagtcaggcgctgtgttgatgctgtacgtggataaattcatcaatacccccttc
cgtgtgctggctcgcatggtggacacactcgcttgtcgaaggatagagatgctcctggct
gagactttgcagaacagcattgcccagttaccacttgaagagttggacaggattcaacag
catctacagagcagtggcttagctcaaaggcaccagcgactgtactccctgctggagaga
ttccgggccacagttttggaggactctgcgagcccttcaccaccagtaacgtcacacccc
ctggacggggagacgccacctcccccagaatctgtcaccgtagacaaggattggtacgtg
atgctggtgagatcgcagtgctgcacgcacacagacacggctctgcttgagtcaacagaa
ctgctaaccaagcttccccagccagacctctgctccatcatggtatctaaggagttcaat
ttgaacctactggccccctgtctcagtgtgggtctgaagagagtctctggagagcagggc
agtgccctcttcgaaaccacactcagggtaaccctggagcaggtttccagcagcgcccag
cttttacccagcagccaccaggtgtttcagccactattgtcacctggaaataccacctac
tggaacaaactgagcgacgtctatggtgaagtgggtttataccagactatagttagtctc
tgcagagctttgacccagtacctgctgtcaatccccaagctacctgcagctcttcacatg
cccagtgacaaggaggtggacgccaccaagtttgtggtattggcacttgagactctgtca
tggcgcttgataagtggacaggttccactgagcattgatctccaaactatcctggaatgc
tgctgtctagccttacagcacccggcgatatggtgcttgctggcttcagcggcttatgtt
acacatgcctgttcatttgtaaactgcatcaagtttctcattgaagcagtggcagtcgag
cctggggatcagcttctgcgtccggagaggaagaagatgagcagagctcaagcagctcag
gatgagctggacgctgcttccacagagcgtccagtacacatcaaaaaagcttgtgaaaca
atggctgaactggtggaaagcctgcagactgtcctggccttgggacattctagaaacgaa
ataatcccagcgtttctgactcctacactccgcaacataaccattagtctggcgcgactg
cctctcgtcaacagctacattagagtgcctccactagtctggaaattgggctggtccccg
aaacctggtggagagtttggcacagctttccccgagatcccagtggagttcctgcaggag
aaggatgtgttccgggagttcctgtatcgcgtgaacactctggggtggacaagtcgcact
cagtttgaagagacctgggcgtccctccttggcgtgctggtgactcagcccattgttatg
gaccatgaggaaaaccaacacgaggaggacctggagaggacccagatcaatgtcctagct
gtccaagcgatcacatccttggtgctgagtgccatgacaatcccagtggcaggaaaccct
gcagtcagctgcctggagcagcagccgcgcaacaaggcattaaaagctctggataccagg
tttggaagaaagctgagtgtgatccgagggattgtggagcaagagatccaggcgatggta
tcaaagagagacaacatagccactcactacccatatcaggcctgggaccccgttccatcc
ctctctgctgcagcgacaggtactttaatcagccatgaaaaactgctgctgcaaatcaac
acggaacgggagatgggcaacatggattataaaatgggacaggtgtccattcactcggtt
tggctgggaaacagcatcacacccttgagggaggaggaatgggatgaagatgaggaagaa
gagagtgacgtccccgctccagtgtctcctcccacctcacccatcaactccaggaaacac
cgtgctggtgtagatatccactcctgctctcagttcctcctggagctctacagtcagtgg
attctgccgaacaaccccaataacaagaaaacccctgtcatcttgatcagtgaagtggtc
cgctcacttctggcagtatctgatttgttcaccgagaggaaccagtatgagatgatgtac
agcacgttgacagagatgcagaaggtccaccccactgaggatgagatactgaaccagtac
ctcgtacctgccatttgtaaggctgcatctgtcctaggcatggacaaggccatagcggag
ccggtcagccgcttgctggagaccaccctgcgcagcacccatatgccgagccgcatcgga
gcactgcacggcatcctctacgtcctggagtgtgacctactggacgacacggctaaacag
ctcatccccatcatcagcgactacctgctctccaatctgagaggagtagcacactgtgtt
aacctccacaaccagcagcatgtgttggtgatgtgtgctgcagccttctacatgattgag
aactacccacttgatgtggtgccagaattcacagcaggaattatccagatgtgtggtgtg
atggtgtctggctgtgaggactccacaccctctgtgacctatcactgcgtgctgcgagga
ctggagcgcctcctgctgtctgagcagctgtcccgcccggacggggaggcgctggtcaag
ctcagtgtggaccgggtcaacatgcccagcccacaccgggccatgtctgcactggggctc
atgctcacgtgcatgtacacagggaaggagaaaactagtcccagtcggacatctgacctt
gatcccactgctcccgacagcgagtctgtcatcgtggccatggagagagtatctgttctc
tttgacagaatccggaagggatttccttgtgaggcaagggtagtggcccgtatcctcccc
cagtttcttgatgacttcttcccaccgcaggatgtgatgaacaaagtcattggcgagttt
ctatccaatcagcagccttatccacagttcatggcaactgttgtttacaaggtattccag
accttgcatgctacaggacaatcttccatggtccgagattgggtcatgctttctctctcc
aacttcactcagaggacacccgtctccatggcgatgtggagtctttcctgtttctttgtc
agcgcttcaacaagccagtggatttcagcactccttcctcatgttatcagccgaatgggg
aaatccgagcttgtggatgtcagcctgttctgtgtggtgggcatggacttctacaaacac
cagattgatgaggagctggatcgtcgggccttccagtctgtgtttgaagtggtagcctcc
cctggcagcccctaccaccgcctgctcacctgcctgcaaaccgtcccccaggtgactgcc
ttctga
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integrated database retrieval system
