Acipenser ruthenus (sterlet): 117420799
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Entry
117420799 CDS
T07327
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut02010
ABC transporters
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117420799
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117420799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arut02000
]
117420799
Transporters [BR:
arut02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117420799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
117420799
NCBI-ProteinID:
XP_033890331
LinkDB
All DBs
Position
1:complement(36138645..36185774)
Genome browser
AA seq
2219 aa
AA seq
DB search
MSYPPYEQHECHFPNKALPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNESIIS
RLFSDAKKILLYSQNDKSLGGFRSLIKALKNLQNTSSGFKLKDFLIENETLSTFLRENAS
FPEFAVKEILDADVNLEKVLTRGFGVRLKDLCNVTKLADFVTISDSRVSSVSEHIICTSS
KEWLNRAERLFLANLDFVKPIRKKVKSDPHSIQLVSEATENLLQSLGTLVVELSSMKSWN
DMRNEILFLTENGSGSPSEMYQAVSRIVCGHPEGGGLKIKSMNWYEDNNYKALFGGNSTE
DETSFYDNSTTPYCNNMMNNFESSPVSRMIWRALKPLLIGKILYTPDTPATQRIIHEVNK
TFQELGVFRDLGGMWDEIKPKVWKFMESSQEMDLVRTLLQNNASSSFLDAQLSGTGWSVK
AISSFLSARTEDSLKTSSVYTWRDVFNETDHAILTISRFMECVNLDKLEPVPTEERLINT
SMKLLDERRFWAGIVFPGIESNSSDLPLHVDYKIRMDIDNVERTNKIKDGYWDPGPRADP
FEDMRYIWGGFTYLQDVIEQGIIRAVTGTEKKTGVYIQQMPYPCYVDDMFLRVMSRSLPL
FMTLAWIYSVAIIIKGIVYEKEARLKETMRIMGLDNSMLWLSWFISSLIPLLISASFLVL
ILKKGNLLPYSDPSVVFVFLATFAVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYV
LCVAWQDYVCFTVKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNNLLSSPIEEDNYNLT
TSIYIMFFDAFLYGVMTWYIETVFPGQYGIPRPWYFPFTKSYWFGDTQQKMPEHISTRKE
NSEVCIEEEPAHLELGVFVEDLVKIYQDGKKVAVDGLTLGFYEGQITSFLGHNGAGKTTT
MSILTGLFPPTSGTAYILGKDIRSDLSTIRQNLGVCPQHNVLFDQLTVEEHIWFYARLKG
LSEVEVKAEMEQILLDVGLPNKRKAKTSQLSGGMQRKLSVALAFVGGSKVIILDEPTAGV
DPYSRRGIWDLLLKYRHGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLG
TGYYLTLVKKDVEPSLSSCRNSSSTVSFIKKDDSVSQSSSDAGLGSDHESDTTTVDVSLI
SNVILKHVPKARMVEDFGHELTYVLPYESAKDGAFVELFHEIDDRLSDLGISSYGVSDTT
LEEIFLKVAKDSGVDVEISDGTIPARRNRRHAFGDRQSCLRPFTEDDVFDLNDSDLDPES
RETDLLSGMDGKGSFKVKGWSLIRQQFVALLWKRFLHARRSRKGFFAQIVLPSVFVCIAL
VFSLIIPPFGKYPSLELQPWMYGEQYTFISNDAPEDAHIQKLFGALTSKPGFGTRCMSGD
PILDTPCMTDNGDWTMPEVPQSVMDIFLNGNWTMENPSPPCECSKDDKKKMLPECPAGAG
GLPPPQITRGTTDILQNLTGRNISDYLVKTYAEIIGKSLKNKIWVNEFRYGGFSLGARSL
QVLPPGEELTDAIIQIRKIFSIEQGKAGDRFMSSLSGFIKGLDTKDNVKIWFNNKGWHGV
GAFLNVMNNGILRASLPEGKDPSLYGISAFNHPLNLTKEQLSQVALITTSVDVLVSICVI
FAMSFVPASFVVYLIQERVSKSKHMQFISGVRPGLYWLANFIWDMCNYIVPATLVIIIFV
CFQQKSYVSAANLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNLFIGINGS
VATFVLDLFGNDSHNSINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRS
PFSWDLVGRNLFAMAVQGAVFFCITVLIQYRFCIKPRRVSAKLPPIHDEDEDVAKERQRI
LSGGGQSDILELKELTKVYRMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFQMLTGD
TDVTGGEAFLNGKSVLSEIHDAHQNMGYCPQFDAINELLTGREHLELYAILRGVPEEEVC
KVAEWGVRKLGLVKYMDKGAGNYSGGNKRKLSTAMALTGGPPVVFLDEPTTGMDPKARRA
LWNCILGIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTII
LRVAGPNPDLKPVMEFIECELPGSVLKEKHRNMLQYQLPSSLSSLGRLFSILSKNKSQLR
IEDYSVSQTTLDQVFVNFAKDQSDEDHSKDNTVHKKEAVINISLLNSFLKNDKVKESYV
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcccccatatgaacaacatgagtgtcactttcctaacaaggccttgccctca
gcggggactctgccatgggttcagggtatcatctgcaatgctaacaatccatgctttcgg
tacccaacaccaggtgaagcacctggagttgtaggaaacttcaatgaatcaatcatctca
cgcctgttttctgatgcaaagaagatcctactatacagtcagaatgacaaaagccttggt
ggattcagaagtcttattaaagcactgaagaacttgcagaacacaagctcaggatttaaa
ctgaaagattttctcattgaaaatgagaccttgtcaacatttcttcgggaaaatgcttca
tttccggagtttgcagtgaaagaaatactggatgcagatgtaaacctggaaaaggtgctc
acaagaggctttggtgtgcgtctgaaggacctttgcaatgtaacgaaattggcagacttt
gtcaccatatctgatagcagagtgtcttcagtctctgaacacatcatctgcacatcatct
aaagaatggctgaatcgcgcagaaagactttttcttgcaaacctagattttgtaaaaccc
atacggaaaaaagtgaagtctgaccctcattccatccagctggtatcggaagccacagaa
aacctcttgcagagtctgggaaccctggtagttgagctgtccagcatgaagagctggaat
gacatgaggaatgagatcctattcctgaccgagaacggcagtggatctccaagcgagatg
taccaggctgtgtccaggattgtctgtggtcacccagaaggaggtggactcaagatcaag
tcaatgaactggtacgaggacaacaactacaaagcactgtttgggggaaacagcacagaa
gatgagacttctttttatgacaactcaaccactccctactgcaataatatgatgaacaat
tttgaatccagcccagtctctagaatgatctggagagcactgaagcctctgctcattggt
aaaattctctacactccagatactccagccacacaaagaatcattcatgaggttaacaag
acatttcaggaactgggtgtgtttcgagatcttggcggcatgtgggacgagattaagcca
aaggtctggaaattcatggaaagcagccaggagatggatctcgttcggactcttctccag
aacaatgcaagttcaagtttcttggatgcacagttaagcggaactggctggtctgtgaaa
gcgatttccagtttcttatcagcgcgcactgaagattctctgaaaactagttcagtgtac
acatggagggatgttttcaatgagactgaccatgctattctaactatatcacgcttcatg
gagtgtgtgaatttggataaactggagcctgttcccactgaggagagattaataaacaca
tcaatgaagctgcttgatgaaagaagattttgggctggaattgtatttcctggaatagaa
tcgaacagtagcgacttgcctctgcatgtagattacaagatccgaatggacattgacaat
gtggagagaaccaacaagattaaagatgggtactgggaccctggtccgagggcagatccc
tttgaagacatgcgctatatctggggcggatttacttaccttcaggatgtgatcgaacag
ggcatcatccgagctgttacaggcactgagaagaaaactggagtttatatacagcagatg
ccttacccctgttatgtggatgacatgtttttgcgagtgatgagtcgctctctgcccctg
ttcatgacattggcttggatctactcagtggctatcattatcaaaggcatcgtctatgag
aaggaagcccgtctgaaggagacaatgaggattatgggactggacaacagcatgctgtgg
ctgagctggttcatcagcagcttgattcctctccttatcagtgcctcatttttggtctta
atactcaagaaaggaaacctgttgccctatagtgacccgagtgtagtttttgtgtttctt
gccacctttgctgtcgtgaccataatgcaatgcttcttgataagcaccattttctcgagg
gcaaacctggctgcggcttgtggaggcatcatctacttcactctctaccttccgtacgtg
ctgtgtgtagcctggcaggattacgtgtgctttactgtgaaagtcatagctagtttgtta
tcaccagtggcgtttgggtttggctgtgagtattttgcgctctttgaagagcagggggtt
gggattcagtggaacaatctcctctccagccctatagaggaagacaactacaacctcact
acctccatatacatcatgtttttcgatgcttttctttatggagtgatgacctggtacatt
gaaactgtcttcccaggccagtatgggattcccagaccatggtattttccatttaccaag
tcatactggtttggtgatacacagcagaaaatgccagaacatatatcgaccagaaaagaa
aactctgaagtttgcattgaggaagagccagcacatcttgaacttggagtattcgttgag
gacttagttaaaatctatcaagatgggaaaaaggttgctgttgatggacttactctcggt
ttctacgaagggcagatcacttcgtttctggggcacaatggagctggcaaaaccaccact
atgtcaatcttgactggcttgttcccgcctacatccggtacggcctacattctgggaaaa
gatatccgctctgacctcagcacaatcagacaaaatctcggagtgtgtcctcagcacaat
gttctttttgaccagctgactgttgaggaacatatttggttctacgcccggctgaaagga
ctgtctgaagtggaggtcaaagcagagatggaacagattctattggacgtaggcctgcca
aacaaacggaaagcaaaaacaagccagctctctggtggtatgcaacggaaactatcagtt
gccctggcctttgttggagggtcaaaggtcattattctagacgaacctacagctggagta
gacccttactcccgcagaggaatctgggatctgcttctaaaatatcgccatggccgcacg
atcatcctttcaacacaccacatggacgaagcagatattcttggcgacagaatagccatt
atttctcatgggaagctgtgctgtgttgggtcatcactctatctgaagaatcaactggga
acaggctattacttgaccctggtcaaaaaagatgtggagccatccctgagttcatgcaga
aacagcagcagcacagtatcgttcattaaaaaggacgacagtgtttcccaaagcagttct
gatgctggacttggtagcgaccatgaaagtgacacaaccactgtagatgtgtctctcatc
tcaaacgtcattctgaagcatgttccgaaggctcgaatggttgaagattttggacacgag
ctgacttacgttttaccatatgaatctgctaaggatggtgcttttgttgagctgttccac
gaaattgatgacagactgtcagacctgggcatttccagctatggagtctcagacaccacg
ctggaggagattttccttaaagtggctaaagacagtggagttgatgtagaaatttcagat
ggtaccatccctgcacggagaaacaggagacatgcttttggggacagacaaagctgcctg
agaccattcactgaggatgatgtctttgatttaaatgattctgatcttgatccagagtcg
agagagacagacctgctaagcggaatggatgggaaaggctcattcaaggtgaaaggctgg
agtcttatcaggcagcagtttgttgctttactctggaaaagatttttgcatgcaaggcgc
tccaggaagggattctttgctcagattgtgttaccatctgtgtttgtgtgcattgctctg
gtgttcagcctgatcatccctccttttggaaaatacccaagcctggaactgcagccatgg
atgtatggtgagcagtacactttcataagcaatgatgcccctgaggatgctcacatacag
aaattatttggagctctaaccagcaagcctggttttggtactcgctgtatgagtggagac
cctattcttgataccccgtgcatgactgacaatggtgattggaccatgcccgaagtaccg
cagagtgtcatggacatttttttaaatggaaactggacgatggaaaacccgtctccacct
tgtgaatgtagcaaggatgacaaaaagaaaatgctccctgaatgccctgctggagctggt
gggctgcctccccctcagattactcgtggtaccacagacattcttcagaaccttacaggc
agaaatatatctgactatctggtgaaaacatacgctgagatcattgggaaaagtctgaag
aacaagatttgggtcaatgaatttaggtacggtggattctcattgggtgctagaagttta
caagtccttcctcctggcgaggaactcaccgatgccataattcaaatcagaaagatcttc
agcatagagcaggggaaagctggagatcggtttatgagcagcttatcaggcttcattaaa
gggctggataccaaagataatgtcaagatttggtttaataacaaaggatggcatggagtc
ggggccttcctgaatgtgatgaacaatggtattcttcgtgccagtttaccagagggaaaa
gatcccagtttgtatggaatcagcgcctttaatcaccctctgaacctcaccaaagaacag
ctttctcaagttgcactgatcacaacctcagtggatgttttggtctctatctgtgtgatt
tttgccatgtcgtttgtaccggccagttttgtagtgtacctcattcaagagagagttagc
aagtccaagcacatgcagttcatcagtggggtcagacccggcctctactggcttgcaaac
ttcatctgggatatgtgcaactatatagtgccagctactctcgtcatcatcatttttgtc
tgttttcaacaaaagtcatatgtttctgctgccaaccttcctgttctggctctgctcctg
ctgctctatgggtggtccattactcctttgatgtaccctgcatcgttcctctttaaaatc
cccagtactgcttatgttgtactcaccagtgttaacctgttcattggaatcaatggcagt
gttgcaaccttcgttcttgacctttttggcaatgacagtcacaactcgattaatgatatt
ctgaagtccgtattcctaatctttcctcacttttgtctgggacgaggtcttatcgacatg
gtgaagaatcaggcaatggccgatgctttggaaagattcggtgaaaaccgctttaggtcg
ccattctcctgggatttggttggaagaaacctctttgctatggcagtgcagggggctgtc
ttcttctgcattacagtactaatccagtacagattctgtattaaacccagacgggtatca
gcaaaacttccaccaatacatgatgaagatgaagacgtggccaaagagaggcagcgaata
ctgagcggtggggggcagagtgacattctggaactcaaagagctgaccaaggtatacagg
atgaagcgcaagccagcagtcgacagactctgtgttggaattcccccaggagagtgcttc
ggattgcttggtgtgaatggcgctggaaaaacaaccaccttccaaatgctgactggagac
acagacgtcactggcggggaagcttttcttaacggaaagagcgtcctgtcagagattcat
gatgcccaccagaacatgggttactgccctcagtttgatgccattaatgagctgctgact
ggaagagaacacctggaattgtatgccattttacgtggggttcctgaagaagaagtttgt
aaggttgctgaatggggagttcgtaaactgggacttgtgaagtacatggacaaaggagct
gggaattacagtggagggaacaaacgcaagctgtccactgcaatggctctgaccggaggc
ccacctgtagtattcctggatgagccaaccacagggatggaccccaaggcacgcagagcc
ctatggaactgtattcttggcattatcaaagaaggaagatctgtggtgcttacctcacac
agtatggaggaatgtgaagcactttgcacacgaatggctatcatggtaaatggcaggttc
agatgccttggcagtgtgcagcatcttaaaaacaggtttggagacggctacacaataatt
cttcgagtagcaggcccaaatcctgacctgaagcctgtcatggagttcattgaatgtgaa
ctccctggcagtgtgctgaaggagaaacatcgaaacatgcttcagtatcaactcccatcc
tcgctctcctccctggggcggctattcagcatcctttccaaaaacaagagccaactccga
atagaagactattcagtatcacaaactacactcgaccaagtatttgtaaattttgcgaag
gaccaaagtgacgaagaccactcaaaggacaatacagttcacaaaaaagaagctgtgata
aatatttcactccttaattcctttttgaaaaacgacaaggtgaaagaaagctatgtgtga
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integrated database retrieval system
