Acipenser ruthenus (sterlet): 117420800
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Entry
117420800 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117420800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117420800
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
arut04091
]
117420800
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
117420800
Lectins [BR:
arut04091
]
L-type lectins
117420800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
Ferritin
FlgN
DUF4407
Golgin_A5
IMD
Motif
Other DBs
NCBI-GeneID:
117420800
NCBI-ProteinID:
XP_033890333
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Position
1:85775770..85792682
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AA seq
505 aa
AA seq
DB search
MAVSMDKWLTVTAGLLIFCIIFNRTNADVAPGSNDAPHRRFEYKYSFKGPHLSQSDGTIP
FWLHNGNAIPSADQVRITPSLRSQKGSVWTKNKAAFENWEAEITFRVTGRGRVGADGLAI
WFTSDQGLEGPVFGAADSWNGLGIFFDSFDNDAKKNNPAVLIVGNNGKLVYDHQNDGSTQ
ALGSCLRDFRNKPYPVRAKITYYKKSLTVLINNGFTPDKEDYEFCAKVDNMIIPAEGFFG
ISAATGGLADDHDVLSFLTFRLTEPGQQEPVPEAEIPQEEKEKYQEEFEHFQQDLDKKKH
EFQKEHPDIHGQPSEDNYESVNDREVRQIFESQSRIHLEIKQLNRQLDMILDEQRRYVTV
VTDEITKRGALTPGQPGQVPTEELDSLVKAQQEVLRNVNDMRNTLTESLRQMGNVHNQGN
AAGTYETVQHFNDIKEHLHVVKKDIDHLIQRNRGPNEKATCPELPPFPSCLSTTHFFMFV
AVQTVLFIGYIMYRSQQEAAAKKFF
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatggacaagtggctgactgtaactgccggtttactaatattttgtata
atatttaatcgcactaatgcagacgttgcgccgggatctaacgacgctcctcaccgccgg
tttgaatacaaatacagcttcaaaggacctcatttatcacagagcgatggcactatcccc
ttttggttgcacaatgggaatgctattccaagtgctgatcaggtccgaatcacaccatca
ttgagaagtcaaaaaggctcagtgtggacaaaaaacaaagcagcctttgaaaactgggaa
gctgaaattacatttcgtgttactggaagaggaagagttggagcagatgggcttgcaatc
tggttcacatcagaccaaggacttgagggtccagtctttggagcagcagattcatggaat
ggccttggaattttctttgactcttttgacaatgatgcaaagaaaaataaccctgctgtt
cttatcgttggtaacaacggaaaacttgtttatgaccatcaaaatgatggttcaacccaa
gcactggggtcctgcctaagggacttcagaaacaagccctatccagtcagagccaaaatc
acatactacaaaaagtcattgacggttttgataaacaatggatttactccagataaggaa
gattatgaattttgtgccaaagtggacaatatgattattccagctgaaggtttttttgga
atttctgcagctacaggaggccttgcagatgaccacgacgtcttatctttcttgacattc
agactgactgaacctggacaacaagagcctgttcccgaagctgagattccacaagaggag
aaggaaaagtaccaagaggagtttgaacatttccagcaagatttggacaagaagaaacat
gaattccaaaaagagcaccctgacatccatggacagccatctgaagataattatgaatct
gttaatgaccgggaggtcaggcagatctttgaaagccagagtagaatccacctggagatc
aaacagctgaacagacagctggatatgatcctggatgagcaaaggcgctatgtgactgta
gtaacagatgaaatcacaaagagaggagctttgacaccgggccagccgggacaggttccc
accgaagaacttgactctcttgtaaaagcacagcaagaggtgcttagaaatgtcaatgat
atgaggaatacattaacagagtctctcagacaaatgggtaatgttcacaaccaaggcaat
gctgcagggacatatgaaactgtccagcacttcaatgacatcaaggaacaccttcatgtg
gttaagaaagatattgaccatttgatacagagaaacagggggccaaatgaaaaggcgacg
tgtccagagctaccacctttcccatcctgtttatctacaacccatttcttcatgtttgta
gcagttcagacagtgttgtttatcggttatataatgtataggagtcagcaagaagctgct
gccaagaagttcttttga
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