KEGG   Acipenser ruthenus (sterlet): 117420863
Entry
117420863         CDS       T07327                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:arut03036]
    117420863 (kdm4c)
Enzymes [BR:arut01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117420863 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117420863 (kdm4c)
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117420863 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD Rad9_Rad53_bind Tudor_3 C1_1 SLX1_C Tudor_5 Baculo_PEP_C LBR_tudor
Other DBs
NCBI-GeneID: 117420863
NCBI-ProteinID: XP_034772377
LinkDB
Position
1:36968189..37200803
AA seq 1667 aa
MAGAEVKSPANPACKIMTFRPTMEEFKDFNKYLVYMESQGAHRAGLAKVIPPKGWKPRRS
YDDIDDLVIQAPIQQMVTGQSGLFTQYNIQKKPLSVKEFRRLANSDKYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEGIEEWNITHLNSILDLVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAVPPVHGKRLERLAAGFFPNSSQSCDAFL
RHKMTLISPSILKKYGIPFDKITQETGEFMITFPFGYHAGFNHGFNCAESTNFASVRWID
YGKVAKACTCSKDMVKISMDLFVKRFQPDRYQLWKQGKDVAPIDHTQPTPGSTPELQSWL
NRRKKAGTPSKSSLYHPQSRSKKPKTPEEEEGAARKTVVTETAAIGAVTDGFKVKGEPER
TAEKRKLQETRLLSGEGAASISEIQQDHKPLDTIQFSGGSQTELRGKKCREKINVGEEEK
IRILKNNSGDFSPTRLLLSSCCSMSVGGEQQSHALAGCKEIDTQEVCNEANSHIPTISDE
GCLATTVQNEAKSQIPAGSNVVDSNSTTVCNEENDEIPAICRVESSFNGEANSLMPTLSA
EMHSNELKPHSPMDCNEVSTASRAEIALSPEHNSMLNLIITAQTDKVQFLTLVSEGVNAM
TSSGSGRGQFQTLQLCDDVHSVIPTLSNELNPLMPELCVEVKSIVSPVSEEVQFLTPARD
DETQPPDATAVCREEDSRPQVSGVHSLPSLKVQSAAQVIINEMPSLTPVHCDGVKPHSPT
LCDQINPPDLTHCMEDDSWSPSLNNEVNYSAPVLTEEVQYLMPASCAEVLSVTAGLSSDA
QSLTPVLNNMVPSVIHAAVSNEVHTHSQALSDKVKSLSPAATSEVSTLGFAPRDEANSSM
PALGEEVQYLTTTLSNEMNTVTPALCKGLNSLTPAPSSAMYTETQGVTYGLESPRPAVCE
EVKLLSHDEVRSQVPMIWDDLNSQTPAVLIESMIPEIPAVLGEAKPQDTTGCYGVNSGAP
LFWNDMTSQASAACCVSKSQAPEDCNQKKHHILGELESQRADTSTAEALTLCSEVTLQRI
KTDAAEDLTLCNELTTQRTETQDAEALTLYDDITPQRTATQDKGFHNPQENSDTEIEHPR
EEETSSVSTEEDDVSDLESGENGLEPGEIPSVSFVIEVGGNKKAKSWHLPLCTPETSAPV
TAVKQQVVRDEDLPDVSPAEEEVHETEAWAKPLVHLWQNKKHNFHAEREYNATAAKTEPY
CAICTLFVPYYQQDDKHEESRVLMESVPGPVQAKKGLKTKPLIPEVCFSYRENSEPCPPS
SLLEENGSSALISCSKCLVQVHASCYGVGPQEIQSNWSCNRCVNGAWTAECCLCNLRGGA
LKQTTDNKWAHVMCAVAIPEVKFTNQTERNPIDPSQIPLQRSKLKCAYCRKRIKKVSGAC
IQCSYGRCPTSFHVTCAHAAGVTMEPDDWPYVVYITCHRHKISQTAKSKLCTKDIAVGQT
VITKHKNLRYYSCRVTEITSQTFYELTFDDGSFSNDTYPEDIVTRDCLQLGPPAVGEAVQ
VKWPDGLFYGAKYLGSNTSHMYQVEFEDGSQLLAKREDVYTLDEELPKKVKGRLSTASSM
RFEDTFYGQDLIQGERKRQRVPNSRFKNDYVADPGYRTFKHQGRKGQ
NT seq 5004 nt   +upstreamnt  +downstreamnt
atggctggagcagaggtaaagtcccctgcaaacccggcatgtaaaataatgaccttcaga
cctaccatggaggaattcaaagacttcaataagtacctggtgtacatggagtctcaaggt
gctcacagagcaggactggctaaggtgatcccacccaagggctggaagccaagacgaagt
tatgatgacattgatgacctggtgatacaagctccgattcagcagatggtcactggacag
tctgggctcttcactcagtacaacattcagaaaaaacctttgagtgtcaaggagttccgt
cgattggctaatagtgacaaatattgtactcctcggtacctcaactatgaagacctggag
aggaaatactggaaaaatttgaccttcgtgtctcccatctatggtgcagatgtgagcggc
agtttgtatgatgagggaattgaggagtggaacattactcacctgaactccatcctagat
cttgttggagaagactgtggcatttccattgaaggagtaaatacaccatacctctatttt
ggaatgtggaaaacaacttttgcatggcatactgaagacatggatctctacagcatcaat
tatctccactttggagagccaaaatcatggtacgcagtccccccagtgcatggcaaaagg
cttgaacgactagctgcaggtttcttcccgaatagctcccagagctgtgatgcatttctc
cgccacaagatgacactgatttctccctcaatactgaagaagtatggtatcccttttgac
aagatcacccaagagacaggggaatttatgatcacttttcccttcggctaccatgctggt
ttcaatcacggcttcaattgtgctgagtcgacaaactttgccagtgtgaggtggatagac
tacgggaaagtagctaaagcatgcacctgcagcaaagatatggtgaaaatatcaatggat
ctctttgtgaagaggttccagccagacagataccagctttggaagcaagggaaagatgtg
gcccctattgaccacacacagcccactcctgggtccacaccagagctccagagctggctc
aatagaaggaagaaagcagggacaccatctaaaagcagcctctatcacccacaatctcga
tctaaaaagcctaaaacaccagaggaggaggagggagcagccagaaagacagtagttaca
gaaactgcagccattggagcagttacagatggcttcaaggtcaagggagagccggagagg
acagcagagaagcggaagctgcaagagacaagattactgtctggtgaaggagcggcgagc
attagtgaaatccagcaggatcacaagccattggatacaatccagttctcagggggtagc
cagacagaactgagaggaaagaagtgcagagagaaaataaatgtgggagaggaggagaag
atcaggattctcaagaacaattccggagacttcagcccaacccggctcctcctttcctct
tgctgctcgatgagtgttggaggggagcagcagtctcacgctttggcaggttgtaaagag
atagatactcaagaagtttgcaatgaggcaaactctcatatccccaccatttctgatgag
ggatgtctagctacaacagtccaaaatgaagcaaagtctcagatcccagcaggcagtaat
gttgtagattctaacagtaccacagtgtgtaatgaagaaaatgatgaaatcccagcaatc
tgtagagtagagagttctttcaatggtgaggcaaactctttaatgccaacgttaagcgct
gaaatgcacagtaatgagctgaagcctcatagccccatggattgcaatgaagttagtaca
gccagcagggctgaaattgctctgtccccagaacataatagtatgttaaatttgataatt
acagctcaaactgataaagtacagttcctcactttagttagtgagggtgtcaacgccatg
acttcatcaggtagtggtagggggcagtttcaaactctgcaactatgtgatgatgtacac
tctgtaattccaacactcagtaatgaactgaatccgttaatgccagaactatgtgttgag
gtaaaatctatagtttcaccggttagtgaagaggtgcagtttttaactccagcaagagat
gatgagacacaacctcccgatgccacggcagtctgcagagaggaagactctcggccccaa
gtgagtggggtacattctctaccaagtctcaaggtgcagtctgcagctcaagtaattatc
aatgagatgccatctctaactccagtacattgtgatggggtaaaaccgcacagtcccaca
ctttgtgatcaaataaacccaccagacctgacgcactgcatggaagatgactcttggtcc
ccctccctcaataacgaggtgaattattcagctccagtacttactgaagaggtccaatat
ctaatgccagccagctgtgctgaagtgctgtctgtgactgcaggactgagtagtgatgca
cagtctttaactccagtacttaataatatggtgccatcagtaattcatgcagcagttagt
aatgaagtacacactcattctcaagctttaagtgataaagtaaagtctctatctccagca
gctacttctgaagtgagcaccttaggttttgcaccaagagatgaggccaattcttcaatg
ccagcactaggtgaggaggtccagtatttaactactacactcagtaatgagatgaacact
gtaactccagcactttgtaaaggcttgaactctttaaccccggcacctagtagtgcaatg
tacactgaaactcaaggagttacttatggacttgaatctccaaggccagcagtttgtgaa
gaagtcaagctcctcagccatgatgaggtaaggtcccaggttccaatgatctgggatgac
ttaaattctcagaccccagcagttctaattgagagcatgatccctgaaatcccagctgtc
ctgggtgaggcaaagcctcaagacacaacaggttgctatggtgtgaattctggagcccca
ctgttttggaatgatatgacatctcaagcttctgcagcttgctgtgtctcaaaatcccaa
gccccagaagattgcaatcaaaagaagcatcacattttaggggagcttgaatcccagagg
gcagacacctctactgcagaggcgttgactctctgcagtgaggtgactctgcaaagaata
aagactgatgctgcagaggatctaaccctttgcaatgagttgactacccaaagaacagag
acacaggacgctgaggccctgaccctttatgatgacataactccacagaggacagcaacc
caagataagggctttcataacccacaagagaactccgacacagaaatcgaacaccccaga
gaggaagagaccagcagtgtttcaacagaagaggatgacgtgagcgaccttgagagtgga
gagaatggattggagcctggagagatacccagtgtaagttttgtgattgaagtgggagga
aataagaaggctaagagttggcatcttccactatgcacacctgagacgagtgccccagtg
actgcagtgaaacaacaggtggtgagagatgaagacttaccagatgtttcaccagcagaa
gaagaagtgcatgaaacagaggcatgggccaaacctcttgttcatctctggcaaaataaa
aagcataattttcatgcagagagggaatacaacgctactgctgccaaaactgagccttac
tgtgctatctgcacactatttgtgccttactaccagcaagatgacaagcatgaagaaagc
agagtacttatggagtcagttcctggcccagtgcaggccaaaaagggcctcaagaccaaa
cccctcattccagaggtttgtttctcatacagagagaacagcgaaccctgccctcccagc
tccctcctggaggaaaatggatctagtgcgctcatctcctgtagcaaatgccttgtacag
gtgcatgccagttgttatggtgttggccctcaggaaattcagagtaactggtcctgcaat
cgttgtgtaaatggcgcctggacagcagagtgctgtctctgcaatttgagaggtggcgca
ctgaagcaaactactgacaacaagtgggcacatgtgatgtgtgcagtggcaatacctgaa
gtgaagttcacaaaccaaacagaacgcaaccccattgaccccagccaaatacctttgcag
agatccaaactgaaatgtgcctactgcaggaagagaatcaagaaggtctcaggagcctgc
atccagtgctcgtatggccggtgcccaacttccttccatgtaacgtgtgcccatgcagct
ggagtgacaatggaaccagatgactggccatatgtcgtctacatcacatgccacagacac
aagatcagtcagactgcaaaaagcaagttatgcacaaaggacatagcagttgggcagaca
gtcatcacaaagcacaagaatttgaggtattacagctgcagagtcactgagatcacatcc
cagaccttttatgagctcacatttgacgacggctctttcagcaatgacacgtatccagaa
gacattgtcaccagggactgcctccagctaggtcctccagcagtgggagaagctgttcag
gtcaagtggcctgatggactgttctatggagccaagtatctgggatccaacacttcccac
atgtatcaggtggagtttgaagatggctctcagctcttagctaagcgggaggatgtctat
acactagatgaagagctccctaaaaaagttaaaggacgcctctccacagcatccagcatg
cgttttgaggacacattctatggacaagacttaattcaaggggagagaaagagacaaaga
gtgccgaactcaaggttcaagaatgactatgtggctgacccaggataccgtaccttcaaa
caccagggccggaaagggcagtaa

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