Acipenser ruthenus (sterlet): 117420878
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Entry
117420878 CDS
T07327
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03030
DNA replication
arut03410
Base excision repair
arut03420
Nucleotide excision repair
arut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117420878
03410 Base excision repair
117420878
03420 Nucleotide excision repair
117420878
03430 Mismatch repair
117420878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117420878
03400 DNA repair and recombination proteins [BR:
arut03400
]
117420878
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117420878
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117420878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_22
AAA_33
RuvB_N
AAA_17
RNA_helicase
Rad17
AAA_5
AAA_30
nSTAND3
AAA_14
AAA_16
AAA_18
AAA_7
AAA_19
NTPase_1
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117420878
NCBI-ProteinID:
XP_033890486
LinkDB
All DBs
Position
1:23550162..23580501
Genome browser
AA seq
1080 aa
AA seq
DB search
MDIRKFFVVQQQKKSATEPTKNGKAKREYDSKKKSELPKVKSLNSDDGSAKKMKQQANKK
KHIIIDSDFEEEVPVQKHRKPSKESPKESKSLSKPARPPKKDPVVYVSETDEEDNFESLK
QPPKRKENGLSASSRSGSTGRAAEVKPPAKPAPPKASVFDYFGDSSVQRSHKKLVATTKR
KAPTGCTDDSTNEDEAIARQLQMDEDAELERQLREDEDFARTLAILDEPPQSKKARKDSE
DQQPSASLPVKSPVKPDRATIKQEAKESDVGSKDPPPKKPSPIKASSKLVLIKQKEETLK
KEVVKKTSVKEKTISPKKEEMVTPKTEKISPKKSESKSPEDSEKKRQNLQTYRSYLNRDG
PRALGSKEVPKGADNCLEGLTFVLTGVLESMERDDAKSLIERYGGKVTGNISKKTNYLVL
GRDSGVSKTEKAESLGTNILDEDGLLDLIRKQPGKRSKYEIAAQAENTPEKTTPPKRAES
AKRKTPTPPKKGLSFQQKSLEKVEPPAPSENKEESLLWVDRYKPTSLKNIIGQQGDQSCA
NKLLRWLRNWHHNTAGDKKPAAKFSKFGGKDDGSTFKAALLSGPPGVGKTTTAALVCEEL
GFSYVEQNASCTRSKNSLKVVIAESLNNTSIKNFYSGTSHTVSNKHVLIMDEVDGMAGNE
DRGGIQELIGLIKNTKIPIICMCNDRNHQKIRSLVNYCFDLRFQRPRVEQIKGAMMSVAF
KEGLKVPPPALNEIILAANQDIRQVLHNLSMWSARDKVLTYDQAKSDASKARKDVKMGPF
DVCRKVFAAGDETAHMSLIDKSDLFFHDYSLAPLFVQENYVHVRPAAAGGNVKKHLMLLS
RTADSICDGDLVDRQIRSRQTWTLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSST
GKHDRIIQELSMHMCLRTHISKRAVNMEYLPFLRDSLVRPMAEHGAEGVSEAVQLMDDYC
LMKEDVDNIMDISTWGGRPDPFSKLDPKVKSAFTRTYNKETHLTPYSLQAVKKAKRGAGS
TVDLGDEFGTEDTQPEDKESEDTIETDAMIKQKKAKSSKSTKHEKTCDSGKGKEKAKKTK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttgtggttcagcagcaaaaaaaatctgcaaccgagccaaca
aagaatggtaaagccaaacgtgaatatgatagcaagaagaagtctgagttgcccaaggtg
aagagtctgaacagtgatgatggttctgcaaagaaaatgaagcaacaagcaaacaaaaag
aaacacattatcattgactcagattttgaagaagaagtgccagtacagaagcacaggaaa
ccctccaaggaatcccccaaggaatccaagtctttatccaaacctgcacgccctcccaaa
aaagaccctgttgtatatgtttcagaaacagatgaagaagataactttgaatccttaaaa
cagcccccgaaacgcaaagagaatggcctgtctgcttccagtcgttcaggcagcactgga
agagcagccgaagtgaaaccccctgctaaaccagctcctcctaaagcatcagtgtttgat
tactttggagacagcagtgtccagaggtcacataaaaagctagtggctacgacaaagaga
aaagcacccacaggatgcactgatgactccactaatgaagatgaggctattgcccgccag
cttcagatggatgaggatgcagagctggagagacagcttcgtgaagatgaggattttgca
aggacactggcgattctagatgagcccccacaatccaaaaaggcaagaaaggactctgag
gatcagcagccatctgcatctctgcctgttaagagtccagtcaaaccagacagagccact
atcaaacaagaagccaaagagtcagatgttggttcaaaggacccccctcccaagaaaccc
tcgcccatcaaagccagctccaagttggtgcttataaaacagaaagaagaaacattgaaa
aaggaagtggtaaagaaaacatcagtgaaagagaagacaatttcacccaaaaaagaagag
atggtcacccccaaaacagagaaaatttctcccaaaaaatcagagtctaaaagtcctgaa
gactcagaaaaaaagcgacagaacttgcagacttatcgcagctacttgaacagagatggt
ccaagagcacttggatcaaaagaagtacccaaaggtgcagacaattgcctggaagggctg
acgtttgtgctgacgggggtcctggagtccatggaacgagatgatgccaagtccctcatc
gagcgatatggtgggaaagtgaccggaaacatcagcaagaagacaaactatttggtgctg
ggcagagacagcggtgtgtccaaaacagaaaaagcagaaagtttggggaccaacattctt
gatgaagatggcctgctggatctgattcgcaaacagcctggcaagagatccaagtatgag
atagctgctcaagctgagaatacaccagaaaagaccacccccccaaagcgagcagagtct
gcaaagagaaagactcccacccctccgaagaaaggcctgtccttccaacagaaatcactg
gagaaggtggagcctccggccccgagtgaaaacaaagaggagagcctgctctgggtggac
aggtacaagcccacctccttgaagaacatcatcggacagcagggagaccagagctgtgcc
aacaagctcctacgctggctccgcaactggcaccacaacactgccggtgacaagaagcct
gcagcaaaattcagtaaattcggtggaaaagacgatggctccaccttcaaggcggcgttg
ttgtcgggtcctcctggtgtgggtaaaacgaccactgcagcgctggtctgtgaggagctg
ggattcagctacgtggagcaaaacgccagctgcacccgcagtaagaacagcctgaaggtg
gtgattgctgagtcactgaataacaccagcatcaagaacttctattcaggcacctctcac
acagtgagtaacaaacatgtgctgatcatggatgaggtggatggaatggcaggcaatgaa
gacagaggtggaatccaggaactgatcggtcttattaaaaacacaaagatccctattatc
tgtatgtgtaatgatcggaatcaccaaaagatcagatctttggtcaactactgctttgat
ctgcgtttccagaggccacgagtggagcagattaagggtgccatgatgtctgttgctttc
aaagaaggtttaaaggtaccacccccggctctaaatgaaatcatattggctgctaaccag
gacatcagacaggtacttcacaatctcagtatgtggtctgcccgggataaagtgcttact
tatgaccaggccaaaagcgatgccagtaaggccagaaaggatgttaagatgggccccttt
gacgtgtgccgaaaggtgtttgctgctggtgatgaaactgctcacatgtccctgatagac
aaatcagatctcttcttccatgactactctctggcacctctctttgtccaagaaaactat
gtccatgtgaggccggctgcagcgggcggcaatgtaaaaaaacacctgatgctcttgagt
agaactgctgacagtatttgtgatggagatctagtggacaggcagattcgctccagacag
acctggacattgttacctacacaggccatttacgccagcgtcctccctggagagctgatg
agaggatacatgtcacagttccctaccttccccagctggttaggaaagttttcatcaaca
ggcaaacatgaccgcatcattcaagaactttcaatgcacatgtgtctgaggacacatatc
agtaagcgggcggtgaacatggagtaccttccattcttgagggactctttggtgaggccg
atggcagagcacggggcggaaggggtgtctgaggctgttcagctcatggacgactattgc
ctcatgaaggaggacgtggacaacatcatggacataagcacctggggggggcgcccagac
cccttctccaagctagacccaaaggttaagtctgccttcacccgtacctacaacaaggag
acacacttaaccccatactcgctgcaggctgtaaagaaggcaaaacgtggagcaggctcg
accgtggatctcggagatgaatttggcacagaggacacccaaccagaggacaaggagtct
gaagacaccattgaaacagatgccatgattaagcaaaagaaagcaaaatcttccaagtca
acaaaacatgagaaaacctgcgattctggcaaagggaaggagaaagcaaagaaaactaaa
tga
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integrated database retrieval system
