Acipenser ruthenus (sterlet): 117420934
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Entry
117420934 CDS
T07327
Name
(RefSeq) heparanase-like
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut00531
Glycosaminoglycan degradation
arut01100
Metabolic pathways
Module
arut_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117420934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
arut00536
]
117420934
Enzymes [BR:
arut01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117420934
Glycosaminoglycan binding proteins [BR:
arut00536
]
Heparan sulfate / Heparin
Enzymes
117420934
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
117420934
NCBI-ProteinID:
XP_033890601
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Position
1:94882838..94894470
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AA seq
554 aa
AA seq
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MYKSSRGIKEVFDFQSSHHVGSDDGVGSGALSLLANTCLFEKEQFAVVNADLIHVERTVS
DAFLSVAVDTNLVTEERYINLLGSQKLRTLAKGLAPGYLRFGGTKADFMRFHTKEVGTRQ
QAFSRQFGIKPGVCDRRPISPETEEYLKSEWVLQEELILMEEHQNHCSKLNISGSTVDML
YNFANCSGFHLIFGLNALLRTKTNTWNSSNAEELLNYCQSKNYSMSWELGNEPNSFMKKS
GIRIDGTQLGKDFVHLREILRRYKNFQDSGLYGPDVGQPRDHTENLLEGFLETGGKVIDA
CTWHHYYVNGRDTSLSDFLSPEVLDSLATKTQEIFQVVNETVPGKKVWLGETSSAFGGGA
PGLSDTYVAGFMWLDKLGLSARLGIDVVIRQVLVGAGSYHLVDSNFDPLPDYWLSLLYKK
LVGPKVLAATAFTHLGTESKLHRVYMHCTKSNSETSGTGAVTVFALNLSKKTSTIHLPPL
LSDKTVVLYLLEPAGEDGLHSRSVQLNGKVLKMVDDTTLPVLTGIPLPVGSPLKLPALSF
AFYVVKDANAPACR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcgtctcggggcatcaaagaagtatttgatttccagagttcgcatcatgtt
ggcagtgatgacggtgttgggtctggggctttatctttactcgccaatacatgcctgttt
gagaaagaacaatttgcagttgtaaacgctgatctaatacatgttgagcgaacagtgagc
gatgcttttctatcagtggctgtagataccaacttggtcactgaagagaggtacatcaac
cttttgggctcacagaagctgcggacactagcaaaaggcctagctcctgggtacttgaga
tttggtggaacaaaagcagacttcatgcgcttccacaccaaggaagtgggaacaagacaa
caggcttttagcagacagtttggaatcaaaccaggtgtttgtgacagaaggcctatttct
cctgagacagaggaatatttgaagtcagagtgggtattgcaggaggaactcatccttatg
gaggaacatcaaaatcattgttccaagctaaatatttcagggtctactgtggatatgttg
tacaattttgccaattgttctgggtttcacttaatcttcggtttgaatgccttactgaga
actaaaactaatacctggaacagctccaatgctgaagaactcctcaactactgccagtca
aagaactacagcatgtcatgggaactgggcaatgagcctaatagctttatgaagaaatct
ggaatcagaattgacggcacccagttgggaaaggatttcgttcaccttcgtgaaatcctc
aggagatacaaaaacttccaagattctggactgtacggacctgatgtgggacagcctcga
gaccacacagagaatctgctggaggggtttctggagacgggtgggaaagtcatagatgct
tgcacctggcatcattactatgtgaatggaagagacacatccctgtcagacttcctcagt
cctgaggtgctggatagccttgctacaaagacccaagaaatctttcaggtcgtcaatgag
acagttccaggtaaaaaagtctggctgggagaaacaagttctgcctttggaggtggagcc
cctggattgtcggacacatacgttgctggcttcatgtggctagataaactgggactctca
gccagactgggcattgacgtggtcatcaggcaagttttggttggggctggatcttaccat
ttagttgattccaatttcgacccattgcctgactattggctgtctttgctatacaagaag
ctggttggccctaaggtgcttgctgctacagcgttcacccatctaggaacagaaagcaag
cttcaccgtgtgtacatgcactgcaccaagagcaacagtgagacctctgggacaggagct
gtaacagtgtttgccttaaatctgagtaagaaaacatcaacaatccacctacctccactc
ttgtctgacaaaacagtcgtcctttacctcttagagcctgctggagaagatggcttacat
tcaaggtctgtgcagctgaatggaaaagtgttgaagatggtggatgacacaacactgcca
gtcctgacagggatacccctacctgtgggaagccctctcaaactcccagctctgtccttt
gcattttatgtggtgaaagatgccaacgctcctgcatgtagataa
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