Acipenser ruthenus (sterlet): 117421088
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Entry
117421088 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117421088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117421088
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117421088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
117421088
NCBI-ProteinID:
XP_033890909
LinkDB
All DBs
Position
1:complement(83507568..83615930)
Genome browser
AA seq
2765 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQTVLTRNPNVFREKSMQNRYGVQG
GIMQQPMMPQYKMSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTTSGNRFMPQQNSPVP
SPYTPQSPPGYMQYPHPPSYTQHQQIQQVSVASPMVAGTMRNIHENKVSGQVSSNSANHH
ADNSRHGSNEDYLHMVPRLGNEEADPSMRNASFTLRSPQSVCSPAGSEGTPKGSRPPLIL
QSPPPYASPRDGPPDILLDSPDRKKKQKKMKMSKEEKEQADKAAMYDIISSPSKDSTKLT
LRLSRVKSSEMDPQEDLLPGMEIGTDPEGDMAYNNMPYVGQPPKQPVAPQDLHRSLNVAA
QCLSQNEQAAFLQAQQVPVLQQNTSVVSAKQPQPATLQPQGAPPQQGVTQPMSVTPYDEV
EMDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEPGAGGTAGATGASVGG
GCSAGNKAAPQEASAAGNGCSRPALMVSIDLQQAGRTDSQGLPDPTLPDPTLPAPLDEGQ
KQSEDPRGLSFAAVAAPGEGSISTRQEDTAGVLKPKPENRPETPRRKSDGEVQKASDGRP
EVIKHRPETPKQKGGESKPETPKHKGESRPETPKQKGEGPPETPKHRHDNRRDSSGKPPS
SEKRPEVSKHRHDGKTDSIKVETGGRGSETPRQRPDGRLASSSTSENPRRDQDGHKQRSE
DRGDAERHRGDPSRIRRPDTPKSSSRGEYDSKHGVKSEGSRDRERDRDREKKHRPESGES
RERPDSPRVKQEPRGDSSSKSRPDRPGFKSPSSKEERRSDGSKNRPDGHKQQQQPDSKPD
FPSYLLGGKSGALKNFVIPKIKRDKDGNVTQDLKRTQTREENKVKVEKMNLVEDLNKGSK
PVVVLQKLTFDEVQKFIKEKEDRNARSSSKSGKNRPSLKSGKGGIDQSVLKDLPPELLAE
IESTMPLCERVKMNKRKRATVNEKPKYAEVSSDDDSNSEEAFESARKKHKKDRDKAWESE
ELRERRGSGDHRKSSHSHEGRRSSGSRYRERSPEDSESDTAPPSLSDIAKRLKKKEKQKK
RKAYEPKLTPEEMMDSSTFKRFTASVDNILENLEDMDFTALADDDEIPQELLLGKHQLNE
LGSESAKIKAMGITCRLPSEKLVKVLNILEKNIQDGAKLSTLINHDNDTEEEERLWRDLI
MERVTKSADACLTALNIMTSTHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDH
GGGLLSSKAKRAKCSTHKQRAIVMLYNKVCDIVSNMSELLEIQLLTDTTILQVSSMGITP
FFVEGVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTA
GEPMYIQMVTALVLQLIQCVVHLPSDKDSNADDEYGKKVDQDVLITNSYETAMRTAQNFL
SVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTE
MALRVASLDYLGTVAARLRKDAVTSKMDQSTIDRILKESPGTDEIQQLQKALLDYLDINA
ETDPSLAFSRKFYIAQWFRDTTTETEKAMRSQNQKDEDSSEGAHHARDIETTGDIMQKAE
ARKKCLRSIIKTTPSKFSTLKMNSDSVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVL
GENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLS
RPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFSKVTEMCVKMIRRVNDEEG
IKKLVNETFQKLWFTPTPSHDKDAMTRKILNITDVVAACKDTGYDWFEQLLQNLLKSEED
ASYKPAKKACVQLVDNLVEHILKYEESLADSENKGVNSNRLVACITTLYLFSKIRAQLMV
KHAMTMQPYLTTKCNTQSDFLVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYG
MTVVQHCVSCLGAVVNKVTHNYKFVWACFNRYYGAITKLKTQNQEDPNSTVLAANKPALL
RSLFTVGALCRHFDFDQEEFKGNTKVVIKEKVLELLLYFTKHADEEVQTKAIIGLGFSFI
QHPSLMFEQDVKTLYNGILSDKNGSVNLKIQVLKNLQTYLQEEDTRMQAADREWKKLSKQ
EDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSNVRHFALNVIALTLNQGLIHPVQCVP
YLIAMGTDPEPTMRNKSDQQLIEIDKKYTGFIHMKAVAGIKMSYQVQQAIWAAHNTIIRG
FRQDEQNTALCSHLFTMVRGNRQHRRAFLISLLNLFDDSAKTDVNMLLYIADNLACFPFQ
TQEEPLFVMHHIDITLSVSGSNLLQSFRESLLKEAKPKEQKYCSEEEEEDEEQTSDSEDE
AMRRPRKLCRRVDSDSESDSDTENEDKVMRRLPDNPTPLIEFANASQGILLLLVLKQHLK
NLYGFSDSKIQKYSPTESAKVYDKAVNRKSSVHFNPRQTMEFLLNDMANATLTNEVKRKI
VRQYLDFKLLMEHLDPDEEDEEGEASANARNKAINALLGGASPKNNAADTEDDESDGDEK
GGASGSRKSRRGGESAEVAGHLNETVEAMDVIAICCPKYKDRPQIARVIQKTSNGYSVHW
MAGSYSGVWAEAKKRDGRKLVPWVDTVKESDIIYKKIALTSAHKLTNKVVQTLRSLYNAK
DGTSS
NT seq
8298 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactctcgctgggatcgctagcctcaca
gacttattgaaccagctccctctcccgtctcctctgcctgccaccaccaccaagagcctg
ctgtacaatgggaggattgcagaagaggtcaactgtctcctggcctgtcgggatgagaac
ctggtgtcccagctcgcgcacagcctcaaccaggtctccacggaccacatagagttgaag
gataaccttggcagtgatgatccagagggggatatcccagttctgctgcagaccgtcttg
accaggaaccccaatgttttcagggagaaaagtatgcagaatcgatacggggttcagggc
ggtattatgcagcagccaatgatgccacaatacaaaatgtctcagaattccatgcatagc
agccctgcatcttcaaactaccagcaaaccactatctcacacagtccttccagccggttt
gtaccaccgcagacgacatctggaaacagatttatgcctcaacaaaatagccctgtgccc
agcccttacacccctcaaagccctccaggatatatgcagtatccacaccccccaagttac
actcagcaccaacagatacagcaagtttcagtagccagccccatggttgctggcaccatg
aggaacattcatgagaacaaggtgtctggccaggtgtcaagtaattctgctaatcaccac
gcagataattccaggcatgggtcaaatgaagactacctacacatggtgcccagactaggg
aatgaggaagctgatccctccatgagaaatgcttccttcactctaagatctccccagtct
gtgtgctctcccgcaggcagtgaaggaactccaaaaggatccaggccacctcttatctta
cagtctccacctccatatgcttcgcctagggatggcccaccagacatcctactagactct
ccagacagaaagaaaaagcagaagaaaatgaaaatgagcaaagaagaaaaagagcaggcg
gataaggctgcaatgtacgacataattagctctccatctaaagactcaacaaagcttaca
ttaagactttcacgtgtgaaatcatcagaaatggacccacaggaagatttgcttcctggc
atggaaatcggtactgatcctgagggtgacatggcatataacaacatgccatatgtgggc
cagccccccaaacagccagtagctccccaggatttgcatcggtccctcaatgttgctgca
cagtgtctgtcacagaatgagcaggccgccttcctgcaggcacagcaggtgcctgtttta
cagcagaacacttcagtggtatcggctaaacagccacagcctgccacacttcaaccccaa
ggtgctcctccacagcagggagtcacgcagcccatgtcagtgaccccctacgatgaggtg
gaaatggacgctttggcagagatcgagaggatagagcgggagtcggccatcgagagagag
cgctgttcaaaagaagtgcaggataaagacaaacctttaaagaaacggaaacaggactcc
tacccacaggagcctggagctgggggcactgctggtgctacaggtgccagtgttggagga
gggtgcagtgctgggaacaaagctgctcctcaggaggctagcgcggcagggaatggttgt
agccgaccagccttaatggtgagcatcgacctccagcaggcggggcggactgactcgcag
ggtctcccagaccccactcttccagaccccactctccctgctcctctagacgagggacag
aaacagtctgaggacccccgagggttgtcctttgctgctgttgctgctcctggggaaggt
tccatcagcactcgacaagaagacacagctggtgtcctcaagcccaaacctgagaaccgt
ccagagactcccaggaggaagtcagatggcgaggttcagaaagcatctgacgggcggcct
gaggtcattaaacacaggcctgagacccccaagcagaaaggaggagaaagcaaacctgag
actcctaagcataaaggtgaaagcagaccggagacccccaagcagaaaggagagggccca
ccggagacccccaaacacagacacgacaacagacgggactcctctggcaaacctcccagt
tctgagaaaaggccagaggtctccaaacatagacacgatggcaaaaccgactctatcaag
gtcgaaactggaggacggggatcagaaacacccaggcagagacctgatgggcgtctggcc
tcctcttctacttcagagaatcccagacgagaccaggatggccacaagcagagatcagag
gaccgtggtgatgctgagaggcacagaggagatccctccaggataaggcggcctgacacc
ccaaagtcctccagcaggggcgagtatgactccaaacatggcgtcaaatcggaaggctcc
cgggacagggagagagatagagacagagaaaagaaacacaggcctgaatcaggcgagtcc
agggagaggcctgatagccctcgggtgaaacaagagccccggggggactccagcagcaaa
tctcggcccgacagacctgggttcaaatctcccagcagcaaggaggaacggcggtcagac
gggagcaaaaatagaccggatggccacaagcagcagcagcagcctgacagcaagccagat
tttcccagctacctactaggaggcaagtcgggggcactgaaaaactttgtaattcccaaa
atcaaacgggacaaggatggtaatgtcactcaggatttgaaaaggacacagacaagagaa
gagaataaggtaaaggtagagaagatgaacttggtggaggatttaaacaaaggatctaag
ccagtggttgtcctgcaaaaattaacttttgatgaggttcagaaattcataaaggagaag
gaggataggaacgcaagaagttcgagtaaatctggcaagaacagaccatccttaaaatcg
ggtaaaggtggaatagaccagtctgtgttgaaggacttgccccctgagctgcttgcagag
atcgagtctaccatgcctttgtgtgaacgggtaaagatgaacaagcgaaagcgtgctact
gtcaatgagaaaccaaaatatgctgaggtcagctctgatgatgatagtaacagcgaagag
gccttcgagtctgctcgaaagaaacacaagaaagatcgggataaggcctgggagagtgag
gagctacgggagagacggggctcaggcgaccacaggaagagcagtcattcacacgagggc
aggaggagctcaggcagccgctaccgagaacgcagccctgaggactcggagagcgacact
gcgcctcctagtctcagtgacattgccaaaaggttgaagaaaaaagaaaaacagaaaaag
aggaaagcatatgaacctaaacttacacctgaagaaatgatggattcatcaacatttaag
aggttcacggccagtgttgataatattttggagaacttggaagatatggatttcacagct
ttggcggatgatgatgaaattccgcaggagttattgttgggcaaacaccagctcaacgaa
ctgggcagcgagtctgctaaaattaaagcgatgggaattacatgcaggcttccttcagaa
aaactggtgaaagttttaaatattttggaaaagaatatacaggatggcgcaaaactttct
acgctgatcaaccatgacaacgacactgaggaagaggaaaggctttggagagatctcata
atggagagagtaacaaaatccgctgatgcttgtctcacagctctcaatatcatgacttct
acccacatgccaaaagccgtgtatatcgaagatgtgatagaaagagtgctccagtacact
aaattccacttgcaaaacactctgtatcctcagtatgatcctgtttacagggtggatcat
ggaggtggtttgttgagttccaaagccaagcgggcaaagtgttcaacccacaaacagagg
gcaatagtgatgctgtacaataaagtgtgtgatattgtaagcaatatgtcagaactcctg
gagatacagttgctcactgatacaaccatcctacaggtttcctcaatgggaattacacca
ttttttgtagaaggcgtcagtgagctgcagttgtgtgccatcaagttggtgactgcggtg
ttctcacgctatgagaagcatagacagttaatattggaggagatattcacatcactggca
aggctgccaacgagtaagcgaagtctgaggaacttcaggctgaatagcagtgacactgcc
ggagagcctatgtatatacagatggtaactgctctagttctgcagcttattcagtgtgtg
gttcacctgccatcagacaaggattctaatgctgatgatgagtatggtaaaaaggttgat
caagatgttctaattacaaattcttatgaaactgcaatgaggacagcacagaactttctt
tcagtctttctaaaaaagtgtggaagcaagcagggcgaagaggattacaggccgctgttt
gagaattttgtgcaggatctattatctactgtgaacaagccagagtggccagctgctgag
ttattgctcagtcttctgggcaggctgctggtgcaccagttcagtaacaagcaaacagag
atggccctgagagtggcatcccttgattatcttggtacagttgcagcaaggctcaggaag
gatgctgtgacaagtaaaatggatcagagcaccatagatcgcatactgaaagagtcaccg
ggaaccgatgagatacagcagttacagaaggccttgctagattacctggatataaatgca
gaaacggatccatctttggctttttcccggaagttctacattgcacagtggttccgggac
actacaactgagacagaaaaagcaatgaggtcacagaaccaaaaagatgaggattcgtct
gagggggcgcatcatgcaagagacatagaaacaacaggagatatcatgcaaaaagcagag
gctcggaagaagtgtcttcgatccataattaaaactacaccatctaagtttagcacgtta
aaaatgaattctgattctgtggactatgaggattcctgcctgattgtccgatatttggcc
tctatgaggccgtttgcacagagcttcgatatttatttaacacagattcttcgtgttctg
ggagagaatgcaattgctgttcgaactaaagccatgaaatgtctgtctgaggttgtcgct
gtggaccctagcattctggccaggctcgacatgcagcgtggcgtccatggacggttaatg
gataactccacaagtgtgcgagaggcagcagtggagttacttgggcgatttgtgttaagt
cgtccacagcttactgagcagtattatgatatgctgatagagaggatactggacaccggt
atcagtgtaagaaagagggtgataaagatccttcgtgatatctgccttgaacagccgact
tttagcaaagttacagagatgtgtgtgaaaatgattcgcagagtgaacgatgaagaaggc
attaagaaactagtaaacgaaacattccagaagctttggtttactcccactcccagccac
gataaggatgctatgaccagaaaaatactcaacattacagatgtggttgctgcttgcaaa
gatactggttatgactggtttgaacagcttcttcagaatttgttgaagtcagaggaggat
gcctcttacaagccagcaaagaaagcctgtgtacagcttgtagacaatttagtggagcac
atccttaaatatgaagaatctctagctgattctgaaaacaaaggagtgaactccaaccgc
ctggtggcatgtattaccactctgtatttgttcagtaagatcagggcacagcttatggtg
aaacatgcaatgaccatgcagccatacctcaccaccaagtgcaacactcagagtgatttc
ctggtcatctgtaatgttgcaaagattttggagctggtagtaccattgatggagcatccc
agtgaaactttccttgctactattgaggaagatctcatgaaactcatcattaaatatggc
atgacagtggtgcaacattgtgtgagttgtcttggggcagttgttaataaagtgacacac
aactacaagtttgtgtgggcatgcttcaacagatattatggtgccataaccaagctaaaa
acacagaaccaagaagatccaaacagcacagtccttgctgccaataaacctgcactcctg
cgctcacttttcactgttggtgctctgtgtcgacatttcgactttgaccaagaagagttc
aaaggcaacaccaaggttgttataaaagaaaaggtactcgaactgctgctttattttacc
aagcatgcagatgaggaggtgcaaacgaaggccatcattggtttagggttttcttttatt
cagcaccctagcttgatgtttgagcaggatgtgaagactctatataatggtatcctgtca
gacaagaacggttctgtgaacttgaaaatccaggtgctgaagaaccttcaaacttacctg
caggaggaagatacccgcatgcaggcggctgaccgagaatggaagaaattgtcaaagcaa
gaggatctgaaagaaatgggcgatatttcctcaggcatgagcagttccataatgcagctc
tacctcaaacaggttctcgaggctttcttccacacgcagtccaacgtccgccactttgct
ctaaatgttattgctctgacactaaaccaaggtcttattcacccagtacagtgtgtgcca
tacctgatagccatgggtacagatcctgaaccgaccatgaggaacaaatctgaccagcag
ttgattgaaattgataagaaatacacaggtttcattcatatgaaagctgtggctgggata
aagatgtcataccaggtacaacaggcaatctgggcagcccacaacacaataataagggga
ttcagacaggatgagcaaaacactgccttgtgttcccaccttttcaccatggtccgtgga
aaccgccagcatagacgagcatttcttatttctctgctcaacctctttgatgacagtgca
aaaactgacgtgaacatgctgttgtacatagcggacaatctagcctgtttcccattccag
acgcaggaggagcccctcttcgtaatgcatcacattgacatcacgctttctgtctcgggc
agtaacctactgcagtcctttagagagtcccttctgaaggaagccaaaccaaaagagcaa
aagtactgctcagaggaagaggaggaggatgaggagcaaaccagcgacagtgaggatgag
gcaatgagacgacccaggaagttatgtcggcgtgtcgactcagactcggaatcagattct
gacacagagaatgaggacaaggtgatgaggaggttaccggacaatcccacaccgctcatc
gaatttgccaatgcttcccaaggaatcctccttctgctggtcctaaagcagcatctaaag
aatctctatgggttttctgacagtaaaatccagaagtactctccaactgaatcggcgaaa
gtgtacgacaaagctgtaaacaggaagtcttcagtgcattttaaccctcgacagacgatg
gagtttcttttgaatgatatggctaatgcaacattaacaaatgaggttaagaggaagatc
gtcagacagtatcttgatttcaagttactaatggaacacttggatcctgacgaagaggat
gaggagggtgaggctagtgcaaatgcccgaaacaaggctatcaatgcattgctgggggga
gccagtccaaaaaacaatgctgctgacactgaggatgatgagagcgatggagatgaaaaa
ggaggagcctccgggtcaagaaagtccagaaggggaggagagtcagcagaagttgctggc
cacttgaatgaaactgtggaagccatggatgttattgctatctgctgccctaagtacaag
gacaggccacagatcgccagagttatacagaagaccagcaacggttacagtgttcattgg
atggcaggctcttatagtggagtctgggctgaggctaagaaacgggatggacgcaaactg
gtgccttgggtagacactgtaaaagagtcggacatcatttacaagaaaattgctctgacg
agcgcacataagctgactaataaagttgttcagactttacgatcgctgtataatgcgaag
gatggaacttccagctaa
DBGET
integrated database retrieval system
