Acipenser ruthenus (sterlet): 117421153
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Entry
117421153 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4C-like
KO
K20163
DENN domain-containing protein 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117421153
Membrane trafficking [BR:
arut04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117421153
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_3
PPR_long
Papo_T_antigen
PPR
Motif
Other DBs
NCBI-GeneID:
117421153
NCBI-ProteinID:
XP_033891038
LinkDB
All DBs
Position
1:complement(49572725..49653421)
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AA seq
1942 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLDQEISLSDTKSSGPKAPITDISVINKSAGETVPEG
FTCIETTYTGQPANLNHGSLKSPELFLCYKRIRDKAPLIDIGVLYEGKERLIQGCEVIQA
TPYGRCANVNNSSANSQRIFITFRRTPLIRPQNSLAVTDICVIIASKGETPPHTFCKVDK
NLNCGMWGSSVYICYKKSVSASNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGATI
ECWAPNTRYPLPVFSTFVLTVSSGEKVYGAAIQFYEPYPMEMLTEKQKQQLGLITAVEKK
IIPNKRVNTNKCICLLSHWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHSLPFPS
PQRPRILVQLSAHDALILSQPVCTPLPLSGANFSTLLMNLGPENCATLLLFVLLESKILL
HSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLALSGVLSAPCPFVIGVDSRYFDLYDP
PPDVVCVDLDTNTIYLSDDKKHYTWKHLPKKPSKSLLNSLTNLHHQLATVHRTAQEGAAV
EMTPIEADFTWHKKMTGLEMETQEAFLRFMACILKGYRTYLKPITQAPSEKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKIFPLDKGTD
KGAKVDVDTSEDTRLIELDESQKSEHTVFVMPPEPPATDGPDPPGKYSYKNFPRLDPELF
DRPIELKPSSISRRVAGASLCNSPVLLAKRTKQEIKSAHKMAKRFYSSPSLWAKCLFSHC
YSLWFICLPAHVRVSHSKVRAMQQAYNVLIKMRNTEVEVLDEVCYRVVMQLCGICGLPVL
AVRVLFEMKNAGVEPNAITYGYYNKAVLESPWPSRNRSGYFMWTKVRSVLRGVAQFKQAL
GKTPSSKSPALVTTAPISTAGGSDGDTMSHGSEDSSNNTNGGEHTLFVRNLIILDSTDKH
CSTGGQSDQGYGSKDELRRDGSDGAVVAAALLKTGPSSKTKAKQDGEGVASSCGDVLSVT
EHQCPIDSPACGHSIVKLSSGSCDSGSSRASSGAIEDSVVEQGAPKIPRGPSDVGQQQQQ
QRQKTFAERSCSFSADSRAGMLMKKGSLDMSPDEIAIKMGADAKILAAALSSTKTSPSAD
NGTKAKRELSFEGVGEQENNTESNMPSKLLELSEDHVESDVVDNVTGPLVDTGEMVVLRS
KLRDGIELDPSKRNSLHSKPVEREDVKEGADPLSLLWSESVESISVQSEEKIVPVVVSRN
LADEIEMYMNLKSPLGVKSTSMELHKGEVKQEDPHSGTAVLERRSSLPAEAVPQTASVAP
KRSPAVTRSKTFTGKPKTSSQTPTRAQNLRSSSLSALVRSSQNGSLGSVMNSISGLKMDN
LLSGPKMDVLKSSMKQAANVASKVWGAVASAYSYSDDEEENSRSDNSFPVGLEDHLRGAG
GGGGESPSSRGMIPGLALNGLTQSSTSLGSSSSSSDTGRLQHSAYMTPRSVKGPESEKSE
FSSSHHASTASIYQNCALEVLMSSCSQCRGCEALVYDEEIMAGWAADDSNLNTTCPFCKS
TFLPLLNIEFKDLRGTASFFLKPSTSGDSIHSTNIPMTTEPVEQKTGPTAPEAANLIGVS
DSPQASPSAPPELNAEEKNSENTQGGQIDPLGLNDRLPHKRGASLTRSNSVGGPLQNMDF
SQRPSHGVSTSSLPNSLQEVVDPLSLTRKPNPMPVSVPYLSPLVLRKELESLLENEGEHV
IYTHKFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNNGVQLQQTSLSQDSKQVFV
QLLWDNINLHQESGEPLYLCWRSLLERKALLSPTDHQEXRTLLNSIVRNIQTNDVYGPIN
LLLREIKKHPDIKRQRSIYREILFLSLVSLGRENIDIEAFDREYKLAYDMLSPDQLKALS
RMDAPPSKSVQWCLKCFGAPVI
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacaaaggccaccgagtgacggactactttgtagtcgcaggactcacggac
aagtccacacctctagaccaggagatcagcctctcggataccaagtctagcggccccaag
gcccccataacagacatctcggtcatcaacaaatcggcaggagaaacagtgcctgagggc
ttcacttgcatcgaaaccacatacacgggacagccggctaacctgaaccatggcagcctc
aagagcccggagttatttctgtgttacaagaggatacgggataaagcaccactgattgat
attggggttttgtatgaggggaaggagaggctaatccaaggctgcgaggtgatccaggcc
acaccctacggacgctgtgccaatgtcaacaacagctcggccaactcccagcgcatcttt
atcacctttcggaggacaccgttaataaggcctcagaactctctggcagtcactgatatc
tgcgtgattattgccagcaagggagagaccccaccacacactttctgcaaagttgataag
aacttaaactgtgggatgtggggttccagcgtatatatttgttacaagaagtcggtctct
gcttccaattcaatagcatacaaggctggtttgatcttcaggtatccagaagaagactat
gaatcattccctctgtcagaatcggtccccctattctgccttccaatgggagctaccata
gagtgctgggctcctaacaccagatatccactgccagtcttctcaacattcgtcttaaca
gtatcttctggggaaaaggtgtatggtgctgctattcagttctatgagccttaccccatg
gagatgctgacggagaagcagaaacagcagctgggcctcatcactgcggtggaaaagaag
ataatccccaacaagcgtgtcaacaccaacaagtgcatctgtctgctctcgcactggccc
ttctttgagtccttccgcaagttcctcatgttcctctacaagctgtctgtctctggacct
caccctcttcccattgaaaagcacatctcccactttatgcacagccttcctttcccttca
ccgcagagaccaagaatcctagttcagctctctgcccatgatgccttgatactttctcag
cctgtttgcacgcctttaccactaagtggggcaaattttagcactttgctaatgaacctt
ggtccagaaaactgtgccaccttactgctgtttgtcctgctggagagtaaaattctgctt
cactcactgagacctgctgtactgactggagtagcagaagctgtggtagcaatgatcttc
cctttccaatggcaatgtccctatatccctctctgtcccctggctctctctggggtcctc
agtgcgccttgtccgtttgttattggagtggactcaagatattttgacctctatgatcca
cctccagatgtggtctgtgtggatctggacacaaacacaatctacttatcggatgacaag
aagcattatacctggaaacacctcccaaagaaacccagcaaaagtctcctcaactccctg
actaacctgcatcaccagctggcaacagtgcacagaacagcgcaggaaggcgctgcagtg
gagatgactcctatcgaggctgacttcacctggcacaaaaagatgactgggctggaaatg
gagacccaggaggccttcctccgcttcatggcctgcatactaaagggatacagaacatac
ctcaaacccatcacacaggcaccatcggagaaggccacggcggccgattcactctatgat
ctccaagggttcttgaaaagcagagatcgtgcacatcagaaattttattcgcagctgacg
aaaactcagatcttcatccgcttcattgaagaatgcacttttgtgagcgacaaggacaca
ggcttagcgttttttgatgattgcattgaaaaaatttttcctttggataaaggcacagac
aaaggagcaaaggttgatgttgacacctctgaggacactaggctgatcgagctcgatgag
tcacagaaaagtgagcacacagtgtttgtgatgcctccagaacccccggcaaccgacgga
cctgacccgccgggcaagtacagctataaaaacttcccccggttggacccagagcttttc
gacagaccaatagaactcaagccttctagcatcagcagacgggtggcaggtgccagttta
tgcaacagcccggtactgctggcgaaacgaaccaagcaggaaatcaaatctgcccacaag
atggctaaaaggttttattccagcccttctctctgggccaagtgcttgttcagccactgc
tacagcttgtggttcatctgcctgccagcccatgtgagagtatcccattccaaggtcagg
gccatgcagcaagcgtacaacgtactcatcaaaatgagaaacacagaggtggaggtcctg
gatgaggtctgctacagggtggtgatgcagctgtgtggaatctgtgggcttccagtgctg
gcagtgagagttctgtttgagatgaaaaatgctggtgttgaacctaacgccatcacctac
ggctattacaacaaggctgtgttggagagtccgtggccgagcaggaacagaagtggttac
tttatgtggacgaaggtacgaagcgtgttgcgtggagtggcacagttcaaacaagcactt
ggaaagacgccatcttcaaaaagcccagccttggtaaccacagccccaatcagcactgca
ggtgggagcgatggtgacacaatgagccatggcagtgaggacagctcgaacaacacaaac
ggtggagaacacacactgtttgtgaggaacctaatcatcctcgactcgactgacaaacac
tgcagcacagggggtcagtctgaccagggatatggttccaaggatgagctgagaagggat
ggctctgatggagctgtggtcgctgcagcgctgctaaagacgggtccatccagtaaaacc
aaagcaaaacaagatggagagggtgtggctagctcctgtggagatgtcttgtctgtcact
gaacaccagtgccccatagactcgccagcctgtggacacagcattgtgaaactgtcctct
gggagctgtgacagtgggagcagtagagccagcagtggtgccattgaggattctgttgtt
gaacagggtgctccaaagatcccccgcggacccagcgatgtagggcaacagcagcagcag
cagcggcagaaaacttttgcagagcggagctgtagcttcagcgcagacagccgggcaggc
atgctgatgaagaaggggagcctggacatgagccctgacgagatagccatcaagatgggt
gccgacgccaaaatcctggccgcagccctgtccagcaccaaaacctcaccatctgcagat
aacggcaccaaagccaaaagagagctgtccttcgaaggagtaggggagcaggagaacaac
acagagagcaacatgccttctaagctgctggaactttcagaggaccatgtggagagtgat
gtggtagacaatgtgacaggccccctggtggacacgggagagatggtggtgctcaggagc
aagctccgggatggaatagaattagacccatcaaagagaaatagcttgcactcaaagcct
gtcgagagggaggatgtgaaggagggagctgatcccttgtctctgttgtggtcagagagt
gtggagtccatatcggtccagagcgaggagaagattgtccctgttgtggtctccagaaac
cttgccgatgagattgagatgtacatgaacctcaagagccccttaggagtcaagtccacc
agcatggagctccacaagggggaggtgaagcaggaggatccccattcaggaacagcagtc
cttgagcgcaggtccagtctgcccgctgaggccgtcccgcagaccgcctctgtcgcaccc
aagcgcagcccggccgtgacacggtccaaaacatttacggggaagcccaagacctccagc
cagacgcccacacgggcccagaatctgcgctctagttccctgtctgctctggtgcgctcc
tcccagaacggctctcttggctctgttatgaacagcatctctggcctaaagatggacaac
ctgctctctggacccaaaatggacgttctcaagtcgagcatgaaacaagctgctaacgtt
gccagcaaagtgtggggagccgtggcgtcggcctatagttattcagatgatgaggaggag
aattcccggagtgataacagcttccctgttggtttggaagaccatctccgaggagcggga
ggaggaggaggagagagcccaagctcgaggggcatgattcctggcctggccttgaatggc
ctgactcagagcagcaccagcctgggcagtagcagcagcagcagcgacactgggagactg
cagcactctgcctatatgaccccaagaagtgtgaaaggaccagaatctgaaaaatctgag
tttagttcatctcatcatgccagtaccgcaagcatatatcagaactgtgcactggaggtg
ttaatgtccagctgctcgcagtgccgagggtgtgaagccctggtttatgatgaagaaata
atggctggatgggctgctgacgattccaatttaaacaccacatgccccttctgtaaaagc
actttccttcctttgctcaatattgagtttaaagacctccgaggcactgccagttttttc
ctgaagcccagtacatctggggatagtatacacagcactaacattcccatgacaacggag
cctgtggagcagaaaaccggccctacagctcctgaagcagccaatctgattggtgtttca
gattcaccacaagccagtccctcagcacctccagagctgaatgctgaggaaaagaacagt
gaaaatacacagggaggccagattgacccactgggactgaacgacagactcccacacaaa
cgaggggcgtctttgacgcgaagcaacagcgttgggggacccctgcagaatatggacttt
tcccagcggccgtcccatggcgtttcaacaagcagccttcccaacagcctgcaggaggtt
gtggatccactgagcctgactaggaagcccaatcctatgccagtgtcagtcccttacctc
agtcctctggtgctgcgcaaagagctagagtctctgctggagaatgagggggaacacgtt
atctacacccacaagttcatcaatcagcaccccatcatcttctggaacctcgtctggtac
ttcaggagactggacctgcccagcaacctgcccggcctcatcctaacatccgagcactgc
aataatggagtgcagcttcaacagacgtctctgtctcaggacagcaagcaggtgttcgtg
cagctgctgtgggacaacatcaacttgcaccaggagtctggagagccgctgtacctgtgc
tggaggagtttattggaaaggaaagctttactgtcccccacggatcaccaggaanaaagg
actctgctgaactccattgtgcgaaacatccagactaacgatgtgtatggacccatcaat
ctgctcctgagggagatcaagaagcacccagacattaaacgccaaaggagcatttacaga
gaaatcctgttcttgtcactggtgtctctggggagagagaatattgatatcgaggccttt
gacagagagtacaaactggcatacgacatgctgagcccggatcagctcaaggccctgagc
aggatggatgcccctccaagcaagagtgtccaatggtgcctgaaatgctttggggcaccg
gtgatctga
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integrated database retrieval system
