KEGG   Acipenser ruthenus (sterlet): 117421243
Entry
117421243         CDS       T07327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1B-like
  KO
K18757  la-related protein 1
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117421243
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117421243
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 117421243
NCBI-ProteinID: XP_033891270
LinkDB
Position
1:11008368..11065041
AA seq 1095 aa
MSTEVESSVLQSSDHVDEMTADSSGGDSNRNKPEIGQLKIGDKVRQRLQQTHGEIQTDKK
SDTGNQQREVVETQIDIVNKEQVNNNKGNAPGNSNQDMEKPKKTTTEAPLPKVNPWTKKK
NMSLTNNTINVNAQESEQQSSTKVIRAGKPKTKKPNKASDFSDITNWPTPGEIANKEQHQ
NIINTQTKKTSPNQNEKKKENNSESKENGEARKEFKEDPTSDEDSQSAAMKRKGKEVEQV
NQDNICIDNLIKPINKANKGNKHKWVPLHLEDSSQDDQERPSSRNNSRSRSESSRSLHNN
RRYDYSRSWRRDRRDDLDEVSSVRSEGANVRGGYRGRGRGRGRGRGRGRGNPHIHYDHSY
GYMDPYAKGPDTRYQTEYSTSMMYYYDDGTGVQMYTVEETLLKEYIKRQIEYYFSPENLE
RDFFLRRKMDDDGFLPISLVASFHRVQALTTDINLIFKALKDSTEVEIIDQKIRRKVNPE
LWPIPGPALLDAPRTDFSQLINCPEFIPGQAFTTQATESAPSSPRVSTASPKKNLEPSNL
QTLSKGLSTSLPDLESEPWIEVKKRHRPSPAKPKESAEPQPDPSPKLKQTPPQQAEQEEL
DFMFDEEMEQIAGRKNTFTNWSDDDSDNEIDDHDVNKILIVTQTPPHLRKHPGGDRTGNH
VSRAKITCDLAKAINDGLYYYEQDLWTDEIDTEYATIKQEVENFKKLNLISKEQFDNLAP
EPPVDPAQEVLPGSPSRQQGFTEELANKLFGAPEPPVSNIARSLPTTVPESPIVXPTQNP
KTPRTPRLQDPTKTPRFYPVVKEGGNIDGKTPRKRKTRHSSNPPLECHVGWVMDSKEHRP
RTSSVSSSNASPSEGTVLVGSYGCTPHSLPKFQHPSHELLRENGFTQQVYHKYRRRCLNE
RKRLGIGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKQSSLEDAKENNRYGLECLFRFYSY
GLEKRFRPDIFKDFQEETLRDYETGQLYGLEKFWAFLKYSQAKNQPIDSRLQEHLSKFKR
LEDFRVDPPMGEEVSRRRCHSSSSSAAEEGGRWRHPANTSSRPVTAASQNTGPKEKTSAG
KPTDNTAKDTDAAEK
NT seq 3288 nt   +upstreamnt  +downstreamnt
atgtccacagaagttgagtcttctgttttgcaatcctccgatcatgttgatgagatgact
gctgactcttccggcggcgatagcaaccgcaacaaacctgagataggtcaactgaagatt
ggggacaaagttagacaacgcctgcaacagacacatggagaaatacagactgataagaaa
agtgacactgggaaccagcaacgggaggttgtggaaacccagatagatatcgtaaataaa
gaacaggtaaacaataacaaggggaatgctcctggcaacagcaatcaagatatggagaaa
ccaaagaaaacaactactgaagctcccctacctaaagtaaacccttggactaagaagaaa
aatatgtctctaactaataacactatcaatgtaaatgcccaggaatcagagcaacagagt
tcaaccaaagttatacgggcaggaaagcctaaaacaaagaaacctaataaggcaagtgac
ttcagtgatatcacaaactggcccacacctggtgaaatagcaaacaaagagcagcaccag
aacatcatcaatacccaaaccaagaagacttctcccaaccagaacgagaagaagaaggag
aacaacagtgagagcaaagagaacggcgaggccaggaaggagttcaaagaggacccgacc
agcgatgaggactcgcagtcggccgccatgaagaggaaaggaaaagaagtggaacaagta
aaccaggataacatttgcatagacaatttaattaagccaataaataaagccaataaaggt
aacaaacataaatgggtaccactacacctagaagactcgagtcaggacgaccaggagaga
cccagctcccgaaacaactctcgctctcgctccgaatccagcaggtcgctgcacaataac
agaagatatgattattcaaggagctggcgccgggatcgcagagatgacctggacgaggtg
tctagtgtgcgaagtgaaggagccaatgtgaggggaggctaccgggggagaggcaggggg
cgtggcagagggagagggcgcggcaggggcaaccctcacatccattatgaccactcatac
ggatacatggatccctacgcaaaaggccctgacacacggtaccagacagagtacagcacc
agtatgatgtattactacgacgatggcacaggagtgcagatgtacacagtggaggaaacc
ctactgaaagaatatataaaaaggcaaattgagtactacttcagcccagaaaaccttgaa
agggactttttcttgagaagaaagatggatgatgatggattcctgccgatttccttggta
gccagcttccacagggtgcaggctctcacgacagacatcaatctcatcttcaaggctctg
aaagacagcactgaggtggagattatagaccagaagatccgaaggaaagtgaatcctgag
ctctggcctataccaggccctgctctgctggatgccccccgaactgacttctcccagcta
atcaactgcccggagtttataccaggacaggccttcaccacgcaagccacagagtctgca
cccagctctccaagagtgagcacagccagtccaaagaagaatctggaacccagtaacctg
cagaccttgtctaaagggctgtccacaagtctacccgacctggagtctgagccctggata
gaagtgaagaaacggcaccgcccttctccagccaaaccaaaggaaagcgcagagccccag
cctgacccgagccccaagctgaagcagacacccccacagcaggcagagcaggaggaactg
gatttcatgtttgacgaggagatggagcagatcgctggccgcaaaaacaccttcaccaac
tggtccgacgacgactcggacaacgagatcgacgaccatgatgtcaacaagatcctgatc
gtcacgcagaccccgccccacctgcgcaaacaccctgggggggaccgcactggcaaccac
gtctcgcgggccaaaatcacctgcgacctggccaaggccatcaacgacggcttgtattac
tacgagcaggacctgtggacggatgaaatcgacactgaatatgccaccataaaacaggag
gtggagaacttcaagaagctgaatctgatcagcaaagagcagtttgacaatctggctcct
gaacctccagtcgatcctgcccaggaagtcctgcctggctctcccagtcgacagcaaggt
ttcacagaagagcttgccaacaagctgttcggagctccagagccaccagtgtccaacatc
gcccggtcattgccaacaactgtaccagagtctcccatagtgntacccacccagaacccc
aaaacgccccgcacgccccggctgcaggaccccaccaaaacaccaaggttctaccccgtc
gtgaaagaggggggcaacatcgatggaaagaccccaagaaagaggaagactcgtcacagc
tcgaacccacccctggagtgccacgtgggctgggtcatggactccaaagagcacaggccg
cgcacgtcctctgtcagcagttccaatgcctcaccgtcagaaggcactgtgctggttggc
agttatggctgcacgccccactctctgcccaagttccaacatccttcacatgagcttctc
agagagaatggcttcacacaacaagtctaccacaaataccgcagaaggtgcctaaatgag
agaaaacggctgggaattggacagtctcaagaaatgaataccttgttcaggttttggtct
ttcttcctcagagataattttaacaggaaaatgtatgaggagtttaaacagtcgtctttg
gaagatgcaaaggaaaacaacaggtatggtctggagtgtctcttccgcttctacagctat
ggtttggaaaagagattcaggcccgatatctttaaggatttccaggaagaaacacttaga
gactatgaaactggacaactgtatggactagagaaattctgggcgttcctaaaatactct
caagccaaaaaccagcccatcgactccaggctgcaggaacacctgagcaagttcaagaga
ctggaggacttcagagtggatcctccaatgggagaggaggtaagtagaaggagatgccac
tcctcctcctcttcagcagcagaggaaggggggcgctggagacacccggccaacacctca
tccaggccagtgacagctgcctcacagaacacagggcccaaagagaaaacttctgctggg
aagcccactgataacactgccaaggacactgacgctgctgagaaataa

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