Acipenser ruthenus (sterlet): 117421361
Help
Entry
117421361 CDS
T07327
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03420
Nucleotide excision repair
arut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117421361
09124 Replication and repair
03420 Nucleotide excision repair
117421361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
arut03051
]
117421361
03400 DNA repair and recombination proteins [BR:
arut03400
]
117421361
Proteasome [BR:
arut03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117421361
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117421361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
CUE
BASP1
DUF1421
Dsc3_N
Ubiquitin_5
UBA_2
UBA_9
Motif
Other DBs
NCBI-GeneID:
117421361
NCBI-ProteinID:
XP_033891558
LinkDB
All DBs
Position
2:complement(29090261..29105803)
Genome browser
AA seq
390 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDGEETVKALKEKIETEKGKDGFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKAAPTAAQPATATSTTASSTTSSTSAPAPTPATPAAPAASETA
PASVAKEEKPTEKGDSKPATTAAPATSPLGTSSLSANVNIFEEATSALVTGQSYENMVSE
IMSMGYEREQVVAALRASFNNPDRAVEYLLTGIPVERESHSIADPVVPQAGSTPPAATTG
PSLTPTSGLTQPAASATVPGANPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQ
LLQQISSHQEQFIQMLNEPAQEAAGQGGGLAEAGGGPMNYIQVTPQEKEAIERLKALGFP
EGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacactgaaaaccctgcagcagcaaaccttcaaaattgatatcgacggagag
gagacggtaaaggcactaaaggaaaaaattgaaacagaaaagggaaaagatggttttcca
gtagctggacaaaaactgatatatgcaggtaaaatcctgaatgatgacacagctctcaaa
gagtataaaatagatgagaagaactttgtggtggtcatggtgacaaagcctaaagcagcc
cctacagctgcccagcctgccactgccacaagcaccacagcttccagcactacgtcttca
acctctgctccagcaccaaccccagcgacaccagcagctcctgctgcatctgaaactgca
ccggccagtgttgcaaaagaggagaaacccaccgagaagggagatagcaaacctgctaca
actgcagcacctgcaacatctcctcttggtacatcaagtctgtctgcaaatgtaaacatt
tttgaagaggctacttctgcacttgtgacggggcagtcctatgaaaacatggtgtcagag
atcatgtcgatgggctatgaaagagagcaggttgttgcagcattgagagccagctttaac
aatcctgacagagcagttgaatacctcctaacgggtattccagtggagagagagagtcat
tcaattgctgatcctgttgtgccacaagcaggcagtacccctcctgctgctactacaggg
ccatcattaactcccacttcaggtttgacacaacctgctgcatcagccacagtccctgga
gccaacccccttgagttcttgaggaatcagcctcagttccagcagatgcgacagattatt
caacagaacccatccctcctaccagccttattgcaacagatagggagagagaacccacag
ttgctgcagcaaatcagcagtcaccaggagcagtttattcagatgctcaatgagccagca
caggaagcagctggacaaggaggagggctggcagaagcgggaggtggaccgatgaactac
attcaagtaacgcctcaggaaaaagaagctattgaacggctaaaagcattaggattccct
gaaggacttgttattcaggcttacttcgcttgtgagaagaatgaaaacttggcggcaaac
tttcttctacagcagaactttgatgatgactaa
DBGET
integrated database retrieval system
