Acipenser ruthenus (sterlet): 117421474
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Entry
117421474 CDS
T07327
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117421474 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117421474 (polr1a)
Enzymes [BR:
arut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117421474 (polr1a)
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117421474 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
117421474
NCBI-ProteinID:
XP_033891830
LinkDB
All DBs
Position
1:complement(6473247..6504664)
Genome browser
AA seq
1709 aa
AA seq
DB search
MLFAKDIPWRRVEGISFGIYSSEEIRKLSVKTITNPRFLDNVGNPSVNGLYDLSLGPADS
KEVCATCTQDFNNCPGHMGHIELPLPVYNPLFFDKLYLLVRGSCLNCHMLTCSRGIIHLL
LNQLKVLDVGVIQAVYDLEEILNRFLVNNAKATANEIQEVLEEYTTEILKNSQPGVQNAV
KNVCESKNTLIKDFWRLHMNAKRCSHCKTGRSVVRKEHNSKLTVTYPTAVHKEAKKGKAN
VEPEVDVLDESLLGKRGYLTPSTAREHIVALWKNEGFFLNLLFSGLEVCASSTAEFNPDM
FFLDLLVVPPSRYRPVNRLGDQMFTNGQTVNMQAAMKDCGMIQKLLAFMAQDKSQPVETI
ENMETEIQEIQAEDPTAAQADRAFLSTIPGQTLSDKLYSAWIRLQSHVNVVFDSDLDKLM
TEKYPGIRQLLEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTFPQ
PVTPWNVQELRQAVINGPNIHPGASMVINEDGSRTILNASNKTQREAVAKQLLTPSNGNQ
KMAMKIVNRHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDG
DEMNAHFPQSELGRAEAYILASTDQQYLVPKDGKPLAGLIQDHMVSGTGMTIRGCFFTRD
QYMELVYRGLTDKRGKVKMLPPAIVKPYPLWTGKQVVSTLLINVIPENQIPLNLMGKAKI
PGKAWIKGWPRPVPGYNPDSMSESMVIIRDGELLCGVLDKAHYGSSVYGLVHCCYELYGG
ETSGKLLTCLARLFTAYLQLYRGFTMGVEDILVKPKANVKRQKIIAESTKCGSKAVRAAF
NLPDTATVIEARDKWQDAHLNKDQRDFNMVDLKFKEQVNQVNNDINKVCMPLGLHRRFPE
NNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDISPRSGGFV
SGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSD
GSVVQFLYGEDGLDVPKTQFLQPSQFPFIMDNYEVIKKSKHLDEVLAKMEPEVAHKHFKA
IKKWKAKQKSPSPRNGAFLLYSEKKMASIKKLNLPEGLVSGRDPASQQLLETWYSMDEKS
QHKYIKKASRCPDPCLAVHRPDVSFGSVSETFDAIVEKYMANYDPRQSNSYGNEELSLDR
LQTLLHLKWQRALCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREI
LMVASSNIKTPMISVPVLNTTKALKRVKKLKKKLTKVCLSEVLHKVDVEESFRVEGRLTK
FRVYQLTFHFLPHELYEKEKCLTPEQILHYMESRFFKILLDAIKRKSSKLSSFKAVNTRK
ATQKDLDRDSGESQEKQDDGDEVQDDGKIVDAEADEGDADASDAKRKEKQEEEVDYESEE
GEEKEEDDAVEDSSSPGQQDEQEEDHEDEQGASVPPTRRTTRNNGSGDLRVKAVLGSSSA
IEGYSYDTQHSLWCEITLKLPVMKMHFDLTSLVVSVARSAVVHETKGITRCLLNDATTKT
GEKELMLITEGINLAELFKYTEILDLKRLYSNDIHAIAGTYGIEVALRVIEKEIKDVFAV
YGIEVDPRHLSLVADYMCFEGVYKPLSRIGIQSSSSPLQQMTFETSYKFLKQATMLGAHD
QLKSPSACLVVGKVVKGGTGLFDLKQPLQ
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgcgaaggacataccttggaggcgcgttgaaggcatatcatttgggatatat
tcctccgaagaaataagaaagctgagtgtgaagacaatcaccaacccccgttttttggat
aatgtggggaatccttctgtcaatggtctctatgacttatccctgggacctgcagactcc
aaggaagtgtgtgccacctgtacacaggactttaacaactgccctggtcacatgggtcac
attgagctgccgctgccagtgtacaacccactgttttttgataaactgtaccttctggtg
cgcggttcctgcctgaactgccacatgttgacctgttcccgtggaatcattcacctgctg
ttgaaccagctgaaggtcctggatgtgggtgtcattcaggctgtctatgacctggaggaa
atactcaacaggttcctggtgaataatgccaaggccaccgcaaacgagattcaggaggtt
ctggaggagtacactacagagattctcaaaaacagtcagccgggcgtgcagaacgctgtg
aaaaatgtttgtgaaagcaagaacactttaatcaaggacttctggagattgcacatgaac
gcaaagaggtgttcacactgcaaaactggcagatcagtagtccgtaaagaacataacagc
aagctcacagtaacataccccacagctgtgcacaaagaggcaaagaaagggaaagcgaat
gttgagcctgaagtggatgttctggatgaatccctgctgggaaagagggggtacctgaca
cccagcactgccagggaacatattgtggcgctctggaagaatgaaggtttcttcttgaat
cttctgttttcgggactggaggtctgtgcaagttccacggcagaattcaatccagacatg
ttcttcctggacctccttgtagtgccaccttccaggtaccgcccagtcaaccggcttggg
gatcagatgttcaccaatggacagacggtgaatatgcaggcggcgatgaaggactgtgga
atgatacagaagctgctagccttcatggcgcaggataagagccagcccgtagagaccata
gagaacatggaaactgaaatacaggaaatacaggcagaggatccgactgcagcccaggca
gaccgcgcgttcttatctacaatccctggacagaccctgtctgataagctctactctgcc
tggattcgtctccagagccacgtcaacgttgtgttcgacagtgacttggataagctgatg
actgaaaaataccctggcattcgacagttgctggagaagaaggatggtctgttcagaaag
catatgatgggaaagagagtggactatgcagcccgttctgttatctgccctgacatgtac
attaataccaacgagattggaatacctatggtgtttgccacgaagctgacgtttcctcag
cctgtcactccctggaacgtgcaggagctgaggcaggctgtgatcaacggccccaacatc
cacccaggagcctccatggtgatcaacgaggatgggtctcgcaccattctcaatgcctcc
aacaagacccagagagaggccgtcgccaagcagcttctcacaccctccaatgggaaccag
aaaatggccatgaaaattgtgaaccggcacataaagaatggggatgtgctgctgctgaac
cgccaacccaccctgcacagaccctccatccaggcccaccgcgcccgcatcctgcctggg
gagaaggtgctgcggctgcactacgctaactgcaaggcctacaacgctgacttcgatggg
gacgagatgaacgcacacttccctcagagcgagctcggacgggctgaggcctatatcctc
gccagcactgaccagcagtacttggttcctaaggatggcaaacccctggcaggcctgatc
caggatcacatggtctcgggaacaggcatgacgattcgtggctgtttcttcacacgagat
cagtacatggagctggtgtaccgagggctgacagataagaggggcaaagtaaagatgctt
cctcctgccattgtcaagccctatccactgtggacagggaaacaggttgtttctacgttg
ctgataaatgtaatcccagaaaaccaaatccctctgaacctgatgggaaaggccaagatt
ccaggcaaggcctggattaaggggtggcctcgccctgttccaggctacaaccctgactcc
atgagcgagtccatggtgataatccgagatggggagctgctctgtggtgttctggacaag
gctcactatggtagctctgtctatggcctggtccactgctgctatgagctgtatggaggg
gagaccagcggcaagctgctgacctgcctggctcgtcttttcacagcctacctgcagctc
tacaggggcttcacaatgggtgttgaagacattttggtaaaacccaaagctaatgtgaaa
agacagaagatcattgcagagtctaccaaatgtggtagcaaggcagttcgagctgcgttc
aatcttcctgatacggccacggtcatcgaggccagagacaagtggcaagatgcccacctc
aacaaagaccagcgagacttcaacatggtggacctgaagttcaaagagcaggtcaaccaa
gtcaacaatgacatcaacaaggtgtgcatgcccctgggtcttcatagacgtttcccagag
aataacctccagatgatggtgcagtcaggagccaaggggtcaactgtcaacaccatgcag
atttcctgcctgctgggacagattgaattggaaggccgcagacccccacttatgccttct
gggaaatccctgccctgcttccagccttatgacatttccccccgatcaggggggtttgtg
tcgggcaggttcctcacaggcatcaaaccacctgagttctttttccattgcatggctggt
agagaaggcctggtagataccgctgttaaaaccagtcgctcgggttacctgcaaaggtgc
atcatcaagcacttggagggtctggtggtgcagtacgacctgagtgtgcgggacagcgat
ggcagtgtggtccagttcctctatggggaggacggactggatgtccccaagacgcagttc
ctacagcccagccagttcccattcataatggacaactacgaggtaatcaagaaatcaaaa
catttagacgaggtcttggctaaaatggaacctgaagttgcacataagcactttaaagcc
attaagaaatggaaagccaaacaaaagagtccctctccacggaacggagccttcctgctg
tactctgagaagaaaatggcgtcgatcaagaaactcaatctcccagaggggcttgtaagc
ggcagagaccccgcctcacagcagttgctggagacatggtactcgatggatgagaagagc
cagcacaaatacatcaagaaggcctctcgctgccctgacccctgtctggcggtccatcgg
ccagacgtttcctttggctcggtttccgaaaccttcgatgccattgtggagaagtacatg
gcaaactatgatcccaggcaaagcaacagctacggcaacgaagaactgtctttggaccgg
ttgcagacgctgcttcatctgaagtggcagagggcactgtgtgaccctggggaggctgtg
gggctgttggcggctcagagtataggggagccctcaactcagatgaccctcaacacattt
cactttgccggcagaggagagatgaacgtcacgcttggtatccccaggttgcgtgaaatc
ctgatggttgcaagttctaacatcaagacaccgatgataagtgttccagtactaaacact
acgaaagcgctgaagagggtgaaaaagctgaagaagaaactgaccaaggtgtgcctttca
gaggtcttacacaaagtcgatgttgaagagtcattcagagttgaggggaggctgaccaag
ttccgtgtctatcagctcacttttcacttcctgccccacgagctctatgagaaggagaag
tgcctgaccccggagcagattctgcattacatggagtccaggttctttaagatcctgctg
gacgcaatcaagaggaagagctcaaaactgtcctctttcaaagctgtgaacactcggaag
gcgacacagaaagatttggaccgtgattctggggaatctcaagaaaaacaggatgacggt
gatgaggttcaagacgatgggaagatcgtcgacgcagaggcagacgagggagacgcagac
gcctcggatgccaaacggaaagagaagcaggaagaggaggttgattatgagagtgaggag
ggagaagagaaggaggaggatgatgcagtagaggactcttcctctccggggcagcaggac
gagcaggaagaagaccatgaggatgagcagggggcttctgtccctcctactagacggacc
acgcggaacaacgggtcaggcgacctgagagtgaaagcagtgctggggtccagcagtgcc
attgagggctacagctacgacacacaacacagtctgtggtgtgagattactctgaagctc
ccagttatgaagatgcactttgacttgacctccctcgtggtgtctgtggctcgcagtgca
gtggtgcacgagactaaaggcatcacccgctgcttgctcaacgatgcgaccaccaagacc
ggagagaaggagctcatgctgatcactgaaggaataaacctggccgagctgttcaaatac
acagagattttggacctgaaacggctgtactccaacgacatccacgccatcgctggcaca
tacggaatcgaggtagcactcagggtcattgagaaggagatcaaggatgtgtttgcggta
tacggtattgaagtggatccccgccacctgtccttggtggctgactacatgtgttttgaa
ggcgtatacaaacccctcagtcgaatcgggatacagtccagctcttctccgctgcagcag
atgacatttgaaactagctataaattcctcaagcaagcgactatgctgggagcccatgat
cagctgaagtctccatctgcgtgcctggtggttgggaaggtggttaaaggaggcactggt
ctgtttgacttgaagcagcctcttcagtag
DBGET
integrated database retrieval system
