Acipenser ruthenus (sterlet): 117422131
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Entry
117422131 CDS
T07327
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117422131
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117422131
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
117422131
NCBI-ProteinID:
XP_034783143
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All DBs
Position
16:complement(24752552..24827624)
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AA seq
541 aa
AA seq
DB search
MMAAAPIQQNGNHTGVPIDLDPQDSRKRPLEAPPEAGSTKRTNTGEDGQFFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTYVSFMGSAGTTERVCLIQGTVEALN
AVHGFIADKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSR
ANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQN
RKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLG
HANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAA
SANPAAAAAANLIATYASEASGGGGTAGGAAGPFALGSLAAATAATNGYFGAASPLAASA
ILGTEKTTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRN
RKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKIKMASGSKIFERQVWRQLSPSYFY
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcccatccagcagaacggaaaccacaccggggtgcccatagacttg
gacccgcaggattccagaaagagaccgctggaagcaccgcctgaagcaggcagcaccaag
agaacaaacactggtgaagacggtcagtttttcttaaaagtcctaatacctagttatgct
gctggatctataattgggaaaggaggacagactattgttcagttacagaaagagaccggg
gccaccatcaaactatctaaatccaaagatttttacccaggtacttacgtcagttttatg
ggctctgcaggtaccacggaacgggtatgtctgatccagggaacagttgaagcattaaat
gcagtccacggcttcattgccgacaagattcgggaaatgcctcagaatgtagcaaagaca
gagcctgtcagcatcctgcagccccagaccaccgttaacccagatcgcatcaaacagaca
ttgccatcttccccaactaccaccaagtcctctccatccgatcccatgaccacctccaga
gccaatcaggtgaagataatagtccccaacagcacagcaggtttgattattggaaagggt
ggtgcaacagtgaaagcaataatggagcaatcaggggcttgggtccagctctctcagaaa
cctgatgggataaacctgcaggagagagtagttacagtgagtggtgaaccagagcagaac
cgcaaagctgtggaactcatcatccaaaagatacaagaagatccccaaagtggcagctgt
ctcaatatcagttatgccaatgtcactggtccagtggccaactccaacccaacaggctct
ccttacgcaaatactgccgaagtgttacccactgctgcagctgctgcggggctgctagga
catgctaaccttgctggagttgcagcattcccagcagttttatccggcttcaccgggaac
gatctggtggccatcacctctgcactcaacactttagccagctatggatataatctcaac
acattagggttgggcctaagccaagctgcagccacgggggcgctggctgcagctgctgca
agtgcaaacccagcagcagcagcggcagcaaacttgatcgccacctatgcaagtgaagcc
tccggcggcggcggcactgctggcggtgcggcaggcccattcgcattaggtagcttggca
gctgccactgctgcaacaaatggatattttggtgccgcttctccacttgcagctagtgcc
atcctgggaacagagaaaactacagacggatcgaaagatgtagttgaaatagcagtgcca
gaaaacctagtcggtgcaatactcggcaaaggaggaaaaacgttggtggaataccaggaa
ttgactggtgcaaggatacagatctcaaaaaagggagaatttgtacctggcacgaggaac
cggaaggtgacgatcacaggaacaccagctgctacacaggctgcgcagtatttaataaca
cagcggatcacatacgagcaaggggttcgggctgctaaccctcaaaaaatcaaaatggct
tcgggaagcaagatctttgagaggcaggtatggcgtcagctttctccaagctatttttat
atgtag
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