Acipenser ruthenus (sterlet): 117422192
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Entry
117422192 CDS
T07327
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
arut04140
Autophagy - animal
arut04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117422192
04137 Mitophagy - animal
117422192
04148 Efferocytosis
117422192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117422192
Transcription factors [BR:
arut03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117422192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
117422192
NCBI-ProteinID:
XP_034783320
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Position
16:31162428..31178767
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AA seq
784 aa
AA seq
DB search
MEVVAVTERKRVSSDRRKEKSRDAARCRRGKESEVFYELSHELPLPHNVTSHLDKASIMR
LILSYLRMRNVLGAAGDQKEESELESQFNNFYLKALDGFVMVLSEDGDMVYLSENVSKCM
GLTQFELTGHSLFDFAHPCDHEELREMLTHRTGSTKKGKEHNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVCDPSKGEQNNCGYKERPMTSMVLICDPIPHPSNIEVPLDS
KTFLSRHSLDMKFSYCDERITELMGYQPEDLLGRSVYEYYHALDSDHLTKTHHDLFAKGQ
AITGQYRMLAKKGGFVWVETQATVIYNTKNSQPQCIVCVNYVLSGVVGEDLVFSLGQTEN
VLKPVESPDADITKLLMQVDPEENTNSLFEKLKEEPEALTLLAPAAGDTIISLDFSKSDN
SEIKKLEEVPLYNDVMLPSSSEKMLMSPLPPTEVVKPLLSSHDPVLNVEVVTKLESSTEP
LGISFTIPQTPDLPLPSATQSLPEPSSPSDYCFKVETDFSGEFKMDLVEKLFAIDTEART
PFTTQVADDFDLEMLAPYIPMDDDFQLRTLDQLSSIEPISASPPDIFHKAQTLVTFAPTA
AKYDVLPLMSIVSPLHMTEEVKSAPNSPFSGKNSRTSSPIRKSTQPLVKLEEQSNQSHPG
TPLRSKRPTAFDEELSPKMLAQRKRKLESGLSLSKAVGIGTQLHQHEGTLKRSKASEDSG
KEVLTHKTILLLPTDLASRLLACSFENSGLPQLTRYDCEVNAPVQGKQTLLQGEDLIRAL
DQVS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtggcagttacagagagaaaacgggtcagttctgatcgtagaaaggagaaa
tcaagagatgcagcaagatgtcgaagaggcaaagagtcggaggtcttctacgagctgtcc
cacgagttgcctctgcctcacaatgtcacctcgcacctggataaggcatccataatgagg
ctgatcctcagctaccttcgcatgagaaatgtactcggtgctgcaggtgaccaaaaggag
gagtctgaattggagagccaatttaacaacttctacctgaaagcactggatggatttgta
atggtcctgtcagaggatggagatatggtttatctttctgaaaatgtcagcaagtgcatg
ggccttactcagttcgagttaacagggcacagcttgtttgattttgcacacccctgtgac
catgaggagttgagagaaatgctcacacacagaacaggatccaccaagaagggtaaggag
cataatacagaacgcagctttttcctcagaatgaagtgcactctgaccagtagaggccgt
actgttaatatcaagtctgcaacttggaaggttcttcactgcacaggccacatccgggtg
tgtgacccctccaaaggagaacagaataactgcgggtacaaggagcgcccaatgacttcc
atggtgttgatctgcgatccaatcccacacccgtcaaatattgaggttccattggacagc
aaaacatttctaagtcgccacagcctagacatgaaattctcatactgtgatgagagaatt
acagagctgatgggataccagcctgaagatctcctgggccgttcagtgtatgagtattac
catgccctggattctgaccatcttactaaaacgcaccatgacttgtttgcaaaaggacaa
gccatcacagggcaataccggatgctggccaagaaaggggggtttgtttgggttgaaact
caagctactgtcatctacaacaccaagaattctcagccacagtgcattgtgtgtgtgaac
tatgtcctgagtggtgtagttggagaagaccttgtattttccctgggtcagactgagaat
gtattaaaaccagtcgagtctccagatgcagacattacaaagctcttaatgcaggttgat
ccagaggagaatacaaacagcctgtttgagaaactgaaagaagaaccagaggccttgaca
ctgcttgccccagctgcaggagacaccatcatttctttggatttcagcaaatcagataat
tcagagataaagaagcttgaggaggttccattgtacaatgatgtcatgctgccttcatcc
agtgagaagatgctgatgtcccctctcccacccacagaagtggtgaagccattgcttagc
agtcatgacccagttttgaatgtggaagtagtcacaaagctggagtccagcacagagcca
ctgggaatttcatttaccattcctcaaacaccagacttacctttaccaagtgcaacccag
agtttgccagagccaagcagtcccagtgattactgctttaaagttgaaactgatttttcc
ggtgagtttaagatggatctggttgagaaactctttgccattgatactgaagctaggacc
ccctttactacacaggttgcagatgactttgatttggaaatgttggctccttatatccca
atggatgatgacttccagttacgcacactggaccaactgtcttctatagagcccatctct
gcaagccctcctgacatctttcataaagctcagacattagtcacatttgcaccaacagca
gcaaagtatgatgtcctgcccctgatgagtatagtctcacctctgcatatgacagaagaa
gtaaagagtgctccaaattcgcctttcagtggaaaaaatagccgaacatcctctccgatc
agaaaaagcacacaacctctagtaaagttggaggaacagtctaaccaatcccatccagga
actcctttgagaagtaaaaggcctactgctttcgatgaagagttatccccaaagatgcta
gctcagcggaagagaaaactagaaagtgggctctcactttccaaggcagttggcattggt
actcagctacatcaacatgaggggacattgaaaagatccaaggcatctgaggatagtggt
aaagaggtgctgacgcataagaccattctcctactgccaacagacttggcaagcagactg
ctagcctgttcatttgaaaacagcggattaccacagctcacccgttacgattgtgaagta
aatgctccggttcaaggcaaacagaccttgcttcagggtgaagacctaatccgggctctg
gatcaagtcagctga
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