KEGG   Acipenser ruthenus (sterlet): 117422257
Entry
117422257         CDS       T07327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: NFX1-type zinc finger-containing protein 1-like
  KO
K27391  NFX1-type zinc finger-containing protein 1
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    117422257
SSDB
Motif
Pfam: AAA_12 AAA_11 ZnF_RZ-type AAA_19 AAA_30 ResIII SLFN-g3_helicase PhoH DEAD AAA_22 DUF1283 nSTAND3 AAA_25 AAA UvrD-helicase
Other DBs
NCBI-GeneID: 117422257
NCBI-ProteinID: XP_034764248
LinkDB
Position
28:complement(9660931..9682040)
AA seq 1820 aa
GAGGGFEGRNEDGAWRRGRGGRAQAGGREGPRGGGAAGGEGAPRVWKLGYRELEELAGKE
PSEVAITLSSSARLRELLEEPEMRQNMVQLLCKVLSKAVGSRLDRQIVQHLVRALKDSGF
LKTVLPQYIMGMMMDPVPARRHQYPEHLDNIITLLSDLVSIFPASSIQVVSMLVTILQPA
VNALRALGVAITDQTQQDLEKINELVTHLQEKRREGTLRTDTYTFLGPEEDAPAGEAGYK
TMPIYPKWEEIHLNDKPFLRPNIVARSYPSTQVYLDTHFRLLREDFVRPLREGIREILQT
YLSPAEGPEGNLRKKRFDDIRVYFDTRLLTPTCTHSGTAYKVHFDTRPLKFVRWENSKRL
IYGSLVCLSRDNFETFLFATVADRDPAELKKGIVLLTFTQESRPALAEVQASHAFLMVET
TAYFEAYRHVLEGLQEEEEEDLPFQRYIVQCQKNVAEPAYLRAGPGAYDLSSIAVPPGGL
QVPCNVLDPDAWPSMEELGLDESQLRALKLALTKELAIIQGPPGTGKTYVGLKIAQALLM
NESVWQPGLARVPVLVVCYTNHALDQFLEGIHTFLDSGIVRVGGRSNSEILKRFTLRELR
GGNNFRKNLPNHLRRAYYEITSELAQAGQRIEEEAGHLECTLRGVLHEQYLERFIHEEHW
SGLCHQPFSDGFLMYGQKQSLILEWLGLGNSEFQRRGGVPLQARGGNAEWENEAEEEEDE
EEEEELVEVEEEAALMEAERVIEGVEPRGHDFRKRKADRAVRDLEGLLLAMSINSKEERA
GQSEEGWQMQKKQKQKMKKRVKKELEKSSVMSEEEEKDTRDIWRLELSDRWRLYRLWLLR
YQIEMRRKALQSEQAYQNAADRLAEIRLREDLCILKEARVIGMTTTGAAKFRRVLQEVRP
RLVIVEEAAEVLEAHTITTLSRACQHLILIGDHQQLRPSATVYELAKNFNLEVSLFERLV
NVDFPYVRLNYQHRMRPEIACLLTPHIYSELENHPSVLEYENIKGVSSNLFFVEHDVLEQ
EIQDGRSHQNKHEAQFVVALCLYLICQGYKPSQITILTTYTGQLYCLRKLLPQKQFQGVK
VHVVDKYQGEENDIILLSLVRSNSYGKVGFLQIANRVCVALSRAKKGLYCIGNMALFGKV
QLWSNILHTLREKGQVGRALMLSCQNHPNTRALVSQAQDFQQAPEGGCSRPCEFRLGCGH
VCTRACHPYDADHKAFQCQKPCQKVLCNQGHRCPGLCFKKCQDCKVLVEKEIPYCGHKQK
VPCHVDPLDFICKEPCLKTLGCGHPCGNVCGEACTDHCPVRVRMTLQCGHVQEEECHYKN
KASRLGEQQPACKLKCDTRLLCSHPCPGTCHSCSQGRFHKGCLQPCGRSLICSHECKEPC
TSECPPCSLPCQNRCMHSACKKTCGELCPPCVEPCEWRCRHLRCGKLCHEPCDRPPCNQP
CDKPLKCGHACIGLCGEPCPSRCRVCHQEEVTEIFFGTEDEPDARYVQLEECGHLLEVTA
MDHYMSLGGNEDEDAVIKLKVCPKCRTPIRKNQRYGTSINRSLEEIEKVKAQILGSPLEI
EKKQKMLKRQLKEKVAIHLHLPKENESLKSGLEHSGLSLGALGILENKMVFYERLAKLIG
GERDMEEEECRRFRVRVGEVLEWLDRPHLRFSEQQLSDLKSEIQRLTFLADFNMRCKQAS
SRRLGPEVRSELAGLRGVLEGTERFTEQDEQRVGEKLKELESALPRNGLGISEAERVMIV
KAMNFPKGHWYKCPNNHVYAIGDCGGATERRHCPECNEAIGGTNHTLVSGNQVASEMDGA
QHAAWSEANNLQNFGGLGFA
NT seq 5463 nt   +upstreamnt  +downstreamnt
ggtgcgggaggcgggtttgaggggaggaatgaagacggagcctggaggagagggagagga
ggcagggcccaggctggagggcgggagggtcctagaggaggcggtgctgctggtggtgaa
ggagccccgcgcgtctggaaactggggtaccgcgaactggaagaactggctgggaaggag
ccctcagaagtggccatcactctgtcctccagcgcgaggttacgggagctcctagaggag
ccagagatgaggcagaatatggtccagctgctctgcaaggttctcagcaaggcagtgggg
tcccgtctcgacaggcagatcgtgcagcacctggtgagggctctgaaggattctgggttc
ctcaagacagtcctacctcaatacattatgggcatgatgatggatcctgtcccggctcgg
agacaccaataccctgaacacctggacaacatcatcacactcttatcggacctggtcagc
atcttcccagccagctctatccaggtggtatccatgctagtgacgatcttgcagcctgca
gtcaatgcacttcgagctttgggagtggccatcacagatcagacccaacaggacctggag
aagatcaatgagcttgtgacccacctacaggagaagcggagagaggggaccctgcgcacc
gacacctacactttcctgggacccgaggaagatgcacctgctggggaagcaggctacaag
accatgcccatctaccccaaatgggaagagatccatctaaacgacaagccctttctgagg
cccaacatcgtcgctcgcagctaccccagcacacaagtctacctggacacacacttccgc
ctgctcagagaggatttcgtcaggccactgcgggaaggaatccgggagatcctgcagacc
tacctctctccggcagaaggaccggaaggaaaccttcggaagaagcgctttgatgatatc
cgggtgtattttgatacccgcttgctgaccccaacctgcacccactcgggcacggcctac
aaggtgcattttgacacccggcccctcaagttcgtccgctgggagaattcgaagcgtctt
atttacggttctctggtctgtttgtcccgggataactttgagacgttcctttttgccacg
gtggcggacagagacccagcggagctcaaaaaagggattgtgctgctcaccttcacccag
gagagtcgccctgccctggccgaggtgcaggcctcgcacgccttcctcatggtggagacc
acggcctactttgaggcctatcggcacgtgctggagggtctgcaagaggaagaagaagag
gacctgcccttccagaggtacattgtgcagtgccagaagaacgtggcagagccagcctac
ctgcgcgctgggcctggtgcctatgacctgtcttccattgcagttccccccggcggactg
caggtgccctgcaatgtgctggaccccgacgcctggcccagcatggaggagctgggtctg
gatgagtctcagctgagggccctgaagctggcactcaccaaggagctggctatcatccag
ggcccacccggcacgggaaagacgtacgtggggttgaagattgcccaggccctcttgatg
aatgagagtgtgtggcagcctggtcttgccagggttccagtgctggtagtctgctacacc
aaccacgctcttgaccagttcctggagggtatccacactttcctggactctgggattgtg
cgagtgggcggtcgcagcaacagtgagatcctcaaacgcttcactctgagagagctgagg
gggggcaataacttccgcaagaaccttccgaaccacctccgccgagcctactacgagata
acgagtgagctggcccaggcagggcaacgcattgaagaggaagcggggcacttggagtgc
acgctgcgaggggtcctgcacgagcagtacctggagcgcttcatccacgaggaacactgg
agcggcctctgccatcagcctttttcagatggcttcctgatgtacggacagaagcaatcc
ctgattctagagtggctgggactggggaattcagaattccagaggagaggaggagtcccc
ctacaggcaaggggaggaaatgcagagtgggagaacgaggctgaagaagaggaggacgag
gaagaggaggaggaactggtggaggtggaggaggaggcggctctgatggaggctgagcgt
gttattgagggggtggagcctcggggtcacgacttcaggaagaggaaggcggacagagcc
gtcagggaccttgaggggctactgctcgctatgagtatcaacagcaaggaagagagagct
ggacagagcgaggagggctggcagatgcagaaaaagcagaagcagaagatgaagaagcgt
gtgaagaaggagctggagaaaagctcagtgatgagcgaggaggaggagaaggacactcgg
gacatctggagactggagctgagtgaccgctggagactgtacaggctgtggctcctgcgg
taccagattgagatgcgccgcaaggccctgcagtcggagcaggcctatcagaacgcagcg
gatcggctggcagagatccggcttcgggaggacctgtgcatcctcaaggaggcccgcgtc
atcggcatgacaaccactggggctgccaagttccgccgtgtgctgcaggaggtgcggcca
cgcctcgtcatcgtggaggaggcagccgaggtgctggaggcacacaccatcaccaccctg
agcagagcctgccagcacctcatactcataggagaccaccagcagctccgtcccagcgcc
acagtctacgagctggccaagaactttaacctagaagtgtccctgtttgagaggctggtc
aacgtggacttcccctacgtcaggctcaactaccagcaccgcatgcgccccgagatcgcc
tgtctcctgacaccccacatctactcggagctggagaaccacccctctgtcctggagtat
gagaacatcaagggggtttcgtccaacctcttctttgttgagcatgacgtccttgaacag
gagatccaggatggtcgaagccaccagaacaaacacgaggcccagtttgtggtggccctg
tgcctctacctcatctgccagggctacaaaccctcccagatcaccatcctcaccacctac
accgggcagctttactgcctgcgcaagctcctgccccagaagcagttccagggggtgaag
gtgcacgtagtcgataagtaccaaggcgaggagaacgacattatcctgctctccctggtc
cgcagcaacagctacggcaaagtgggcttccttcagatcgccaaccgggtctgtgtagct
ctgtcccgtgccaagaagggcctctactgcataggcaacatggctttgtttgggaaagtt
cagctgtggagcaacattctgcacactttaagggagaagggccaggtgggacgtgccttg
atgttgagctgtcagaaccacccgaacacacgggccttggtctcccaagcccaggacttc
cagcaggcccctgaaggaggctgcagccggccctgcgagttccgcttgggctgtggccac
gtctgcacccgagcctgtcacccgtacgacgccgaccacaaggccttccagtgccagaag
ccctgccagaaagtgctgtgcaatcagggccaccgttgcccggggctctgcttcaagaag
tgccaggactgcaaggtgttggtggagaaagagatcccctattgtgggcacaagcagaag
gttccctgccacgtagaccccctggatttcatctgcaaggagccatgcctgaaaacgctg
ggctgtgggcatccgtgtggcaatgtctgcggagaggcctgtacagatcactgcccagtt
cgggtcaggatgactttacagtgcgggcatgtgcaagaggaggagtgccactataagaac
aaggcatcacgcttgggtgaacaacagccggcgtgcaagttgaagtgtgacactcggctc
ctgtgcagtcacccctgccccggcacctgccacagctgcagccagggtcgcttccacaag
ggctgcctccagccctgcggacgctcgctcatctgctcccacgagtgcaaggagccttgc
accagtgagtgcccgccttgcagcctgccatgccagaaccgctgcatgcacagcgcctgc
aagaaaacctgcggcgagctctgcccaccctgcgtggagccctgtgagtggcgctgccgc
cacctgcgctgtgggaagctgtgccacgagccctgcgacagacctccatgcaaccagccc
tgcgacaagcccttgaagtgtgggcacgcctgcattggattgtgtggcgagccctgcccg
tctaggtgtcgcgtctgccaccaagaggaagtcactgagatcttctttggcacagaagac
gagccagatgcccgctatgtgcagctggaggaatgtgggcacctgctggaggtcacggcc
atggaccactacatgagcctggggggcaacgaggatgaagatgcggtgatcaagctcaag
gtctgccccaagtgccggacgcccatccgcaaaaaccagcgatacgggacctccatcaac
cgcagcctggaggagatcgagaaggtgaaagcccagatcttgggctcccctctggagatt
gagaagaagcagaagatgcttaaacggcagttgaaggagaaggtggccatccacctccac
ctgcccaaggagaacgagagcctgaagtcagggctggagcactctgggctctcgcttggg
gcattagggatccttgagaacaagatggtcttctatgagcgcctggcaaagctgataggg
ggtgagagagacatggaggaggaggaatgtaggcgtttcagggttcgggtaggggaagtc
ctggagtggcttgaccggcctcacctgaggttctctgagcagcagctgtctgatcttaag
agcgagatccagcggttgaccttcctggccgatttcaacatgcggtgcaagcaagcatcc
tccaggcggctgggccccgaggtgaggtcagagctggcaggactcaggggcgtcctggag
ggcacagagagattcacagagcaggatgagcagcgggtcggggagaagctgaaggagcta
gagtctgcactgcctcgcaatgggctgggaatttcagaagccgaaagagtgatgatcgtc
aaagcaatgaacttcccgaaggggcactggtacaaatgccccaacaatcatgtgtacgcc
ataggagactgtggaggtgccacggagagacggcactgcccagaatgcaatgaagccata
ggaggtaccaaccatacgctggtcagcggaaatcaggtggcatcagaaatggacggggca
caacatgcagcctggtctgaagccaacaacctccagaacttcggaggcttgggatttgct
tag

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