Acipenser ruthenus (sterlet): 117422257
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Entry
117422257 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117422257
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Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
PhoH
DEAD
AAA_22
DUF1283
nSTAND3
AAA_25
AAA
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
117422257
NCBI-ProteinID:
XP_034764248
LinkDB
All DBs
Position
28:complement(9660931..9682040)
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AA seq
1820 aa
AA seq
DB search
GAGGGFEGRNEDGAWRRGRGGRAQAGGREGPRGGGAAGGEGAPRVWKLGYRELEELAGKE
PSEVAITLSSSARLRELLEEPEMRQNMVQLLCKVLSKAVGSRLDRQIVQHLVRALKDSGF
LKTVLPQYIMGMMMDPVPARRHQYPEHLDNIITLLSDLVSIFPASSIQVVSMLVTILQPA
VNALRALGVAITDQTQQDLEKINELVTHLQEKRREGTLRTDTYTFLGPEEDAPAGEAGYK
TMPIYPKWEEIHLNDKPFLRPNIVARSYPSTQVYLDTHFRLLREDFVRPLREGIREILQT
YLSPAEGPEGNLRKKRFDDIRVYFDTRLLTPTCTHSGTAYKVHFDTRPLKFVRWENSKRL
IYGSLVCLSRDNFETFLFATVADRDPAELKKGIVLLTFTQESRPALAEVQASHAFLMVET
TAYFEAYRHVLEGLQEEEEEDLPFQRYIVQCQKNVAEPAYLRAGPGAYDLSSIAVPPGGL
QVPCNVLDPDAWPSMEELGLDESQLRALKLALTKELAIIQGPPGTGKTYVGLKIAQALLM
NESVWQPGLARVPVLVVCYTNHALDQFLEGIHTFLDSGIVRVGGRSNSEILKRFTLRELR
GGNNFRKNLPNHLRRAYYEITSELAQAGQRIEEEAGHLECTLRGVLHEQYLERFIHEEHW
SGLCHQPFSDGFLMYGQKQSLILEWLGLGNSEFQRRGGVPLQARGGNAEWENEAEEEEDE
EEEEELVEVEEEAALMEAERVIEGVEPRGHDFRKRKADRAVRDLEGLLLAMSINSKEERA
GQSEEGWQMQKKQKQKMKKRVKKELEKSSVMSEEEEKDTRDIWRLELSDRWRLYRLWLLR
YQIEMRRKALQSEQAYQNAADRLAEIRLREDLCILKEARVIGMTTTGAAKFRRVLQEVRP
RLVIVEEAAEVLEAHTITTLSRACQHLILIGDHQQLRPSATVYELAKNFNLEVSLFERLV
NVDFPYVRLNYQHRMRPEIACLLTPHIYSELENHPSVLEYENIKGVSSNLFFVEHDVLEQ
EIQDGRSHQNKHEAQFVVALCLYLICQGYKPSQITILTTYTGQLYCLRKLLPQKQFQGVK
VHVVDKYQGEENDIILLSLVRSNSYGKVGFLQIANRVCVALSRAKKGLYCIGNMALFGKV
QLWSNILHTLREKGQVGRALMLSCQNHPNTRALVSQAQDFQQAPEGGCSRPCEFRLGCGH
VCTRACHPYDADHKAFQCQKPCQKVLCNQGHRCPGLCFKKCQDCKVLVEKEIPYCGHKQK
VPCHVDPLDFICKEPCLKTLGCGHPCGNVCGEACTDHCPVRVRMTLQCGHVQEEECHYKN
KASRLGEQQPACKLKCDTRLLCSHPCPGTCHSCSQGRFHKGCLQPCGRSLICSHECKEPC
TSECPPCSLPCQNRCMHSACKKTCGELCPPCVEPCEWRCRHLRCGKLCHEPCDRPPCNQP
CDKPLKCGHACIGLCGEPCPSRCRVCHQEEVTEIFFGTEDEPDARYVQLEECGHLLEVTA
MDHYMSLGGNEDEDAVIKLKVCPKCRTPIRKNQRYGTSINRSLEEIEKVKAQILGSPLEI
EKKQKMLKRQLKEKVAIHLHLPKENESLKSGLEHSGLSLGALGILENKMVFYERLAKLIG
GERDMEEEECRRFRVRVGEVLEWLDRPHLRFSEQQLSDLKSEIQRLTFLADFNMRCKQAS
SRRLGPEVRSELAGLRGVLEGTERFTEQDEQRVGEKLKELESALPRNGLGISEAERVMIV
KAMNFPKGHWYKCPNNHVYAIGDCGGATERRHCPECNEAIGGTNHTLVSGNQVASEMDGA
QHAAWSEANNLQNFGGLGFA
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
ggtgcgggaggcgggtttgaggggaggaatgaagacggagcctggaggagagggagagga
ggcagggcccaggctggagggcgggagggtcctagaggaggcggtgctgctggtggtgaa
ggagccccgcgcgtctggaaactggggtaccgcgaactggaagaactggctgggaaggag
ccctcagaagtggccatcactctgtcctccagcgcgaggttacgggagctcctagaggag
ccagagatgaggcagaatatggtccagctgctctgcaaggttctcagcaaggcagtgggg
tcccgtctcgacaggcagatcgtgcagcacctggtgagggctctgaaggattctgggttc
ctcaagacagtcctacctcaatacattatgggcatgatgatggatcctgtcccggctcgg
agacaccaataccctgaacacctggacaacatcatcacactcttatcggacctggtcagc
atcttcccagccagctctatccaggtggtatccatgctagtgacgatcttgcagcctgca
gtcaatgcacttcgagctttgggagtggccatcacagatcagacccaacaggacctggag
aagatcaatgagcttgtgacccacctacaggagaagcggagagaggggaccctgcgcacc
gacacctacactttcctgggacccgaggaagatgcacctgctggggaagcaggctacaag
accatgcccatctaccccaaatgggaagagatccatctaaacgacaagccctttctgagg
cccaacatcgtcgctcgcagctaccccagcacacaagtctacctggacacacacttccgc
ctgctcagagaggatttcgtcaggccactgcgggaaggaatccgggagatcctgcagacc
tacctctctccggcagaaggaccggaaggaaaccttcggaagaagcgctttgatgatatc
cgggtgtattttgatacccgcttgctgaccccaacctgcacccactcgggcacggcctac
aaggtgcattttgacacccggcccctcaagttcgtccgctgggagaattcgaagcgtctt
atttacggttctctggtctgtttgtcccgggataactttgagacgttcctttttgccacg
gtggcggacagagacccagcggagctcaaaaaagggattgtgctgctcaccttcacccag
gagagtcgccctgccctggccgaggtgcaggcctcgcacgccttcctcatggtggagacc
acggcctactttgaggcctatcggcacgtgctggagggtctgcaagaggaagaagaagag
gacctgcccttccagaggtacattgtgcagtgccagaagaacgtggcagagccagcctac
ctgcgcgctgggcctggtgcctatgacctgtcttccattgcagttccccccggcggactg
caggtgccctgcaatgtgctggaccccgacgcctggcccagcatggaggagctgggtctg
gatgagtctcagctgagggccctgaagctggcactcaccaaggagctggctatcatccag
ggcccacccggcacgggaaagacgtacgtggggttgaagattgcccaggccctcttgatg
aatgagagtgtgtggcagcctggtcttgccagggttccagtgctggtagtctgctacacc
aaccacgctcttgaccagttcctggagggtatccacactttcctggactctgggattgtg
cgagtgggcggtcgcagcaacagtgagatcctcaaacgcttcactctgagagagctgagg
gggggcaataacttccgcaagaaccttccgaaccacctccgccgagcctactacgagata
acgagtgagctggcccaggcagggcaacgcattgaagaggaagcggggcacttggagtgc
acgctgcgaggggtcctgcacgagcagtacctggagcgcttcatccacgaggaacactgg
agcggcctctgccatcagcctttttcagatggcttcctgatgtacggacagaagcaatcc
ctgattctagagtggctgggactggggaattcagaattccagaggagaggaggagtcccc
ctacaggcaaggggaggaaatgcagagtgggagaacgaggctgaagaagaggaggacgag
gaagaggaggaggaactggtggaggtggaggaggaggcggctctgatggaggctgagcgt
gttattgagggggtggagcctcggggtcacgacttcaggaagaggaaggcggacagagcc
gtcagggaccttgaggggctactgctcgctatgagtatcaacagcaaggaagagagagct
ggacagagcgaggagggctggcagatgcagaaaaagcagaagcagaagatgaagaagcgt
gtgaagaaggagctggagaaaagctcagtgatgagcgaggaggaggagaaggacactcgg
gacatctggagactggagctgagtgaccgctggagactgtacaggctgtggctcctgcgg
taccagattgagatgcgccgcaaggccctgcagtcggagcaggcctatcagaacgcagcg
gatcggctggcagagatccggcttcgggaggacctgtgcatcctcaaggaggcccgcgtc
atcggcatgacaaccactggggctgccaagttccgccgtgtgctgcaggaggtgcggcca
cgcctcgtcatcgtggaggaggcagccgaggtgctggaggcacacaccatcaccaccctg
agcagagcctgccagcacctcatactcataggagaccaccagcagctccgtcccagcgcc
acagtctacgagctggccaagaactttaacctagaagtgtccctgtttgagaggctggtc
aacgtggacttcccctacgtcaggctcaactaccagcaccgcatgcgccccgagatcgcc
tgtctcctgacaccccacatctactcggagctggagaaccacccctctgtcctggagtat
gagaacatcaagggggtttcgtccaacctcttctttgttgagcatgacgtccttgaacag
gagatccaggatggtcgaagccaccagaacaaacacgaggcccagtttgtggtggccctg
tgcctctacctcatctgccagggctacaaaccctcccagatcaccatcctcaccacctac
accgggcagctttactgcctgcgcaagctcctgccccagaagcagttccagggggtgaag
gtgcacgtagtcgataagtaccaaggcgaggagaacgacattatcctgctctccctggtc
cgcagcaacagctacggcaaagtgggcttccttcagatcgccaaccgggtctgtgtagct
ctgtcccgtgccaagaagggcctctactgcataggcaacatggctttgtttgggaaagtt
cagctgtggagcaacattctgcacactttaagggagaagggccaggtgggacgtgccttg
atgttgagctgtcagaaccacccgaacacacgggccttggtctcccaagcccaggacttc
cagcaggcccctgaaggaggctgcagccggccctgcgagttccgcttgggctgtggccac
gtctgcacccgagcctgtcacccgtacgacgccgaccacaaggccttccagtgccagaag
ccctgccagaaagtgctgtgcaatcagggccaccgttgcccggggctctgcttcaagaag
tgccaggactgcaaggtgttggtggagaaagagatcccctattgtgggcacaagcagaag
gttccctgccacgtagaccccctggatttcatctgcaaggagccatgcctgaaaacgctg
ggctgtgggcatccgtgtggcaatgtctgcggagaggcctgtacagatcactgcccagtt
cgggtcaggatgactttacagtgcgggcatgtgcaagaggaggagtgccactataagaac
aaggcatcacgcttgggtgaacaacagccggcgtgcaagttgaagtgtgacactcggctc
ctgtgcagtcacccctgccccggcacctgccacagctgcagccagggtcgcttccacaag
ggctgcctccagccctgcggacgctcgctcatctgctcccacgagtgcaaggagccttgc
accagtgagtgcccgccttgcagcctgccatgccagaaccgctgcatgcacagcgcctgc
aagaaaacctgcggcgagctctgcccaccctgcgtggagccctgtgagtggcgctgccgc
cacctgcgctgtgggaagctgtgccacgagccctgcgacagacctccatgcaaccagccc
tgcgacaagcccttgaagtgtgggcacgcctgcattggattgtgtggcgagccctgcccg
tctaggtgtcgcgtctgccaccaagaggaagtcactgagatcttctttggcacagaagac
gagccagatgcccgctatgtgcagctggaggaatgtgggcacctgctggaggtcacggcc
atggaccactacatgagcctggggggcaacgaggatgaagatgcggtgatcaagctcaag
gtctgccccaagtgccggacgcccatccgcaaaaaccagcgatacgggacctccatcaac
cgcagcctggaggagatcgagaaggtgaaagcccagatcttgggctcccctctggagatt
gagaagaagcagaagatgcttaaacggcagttgaaggagaaggtggccatccacctccac
ctgcccaaggagaacgagagcctgaagtcagggctggagcactctgggctctcgcttggg
gcattagggatccttgagaacaagatggtcttctatgagcgcctggcaaagctgataggg
ggtgagagagacatggaggaggaggaatgtaggcgtttcagggttcgggtaggggaagtc
ctggagtggcttgaccggcctcacctgaggttctctgagcagcagctgtctgatcttaag
agcgagatccagcggttgaccttcctggccgatttcaacatgcggtgcaagcaagcatcc
tccaggcggctgggccccgaggtgaggtcagagctggcaggactcaggggcgtcctggag
ggcacagagagattcacagagcaggatgagcagcgggtcggggagaagctgaaggagcta
gagtctgcactgcctcgcaatgggctgggaatttcagaagccgaaagagtgatgatcgtc
aaagcaatgaacttcccgaaggggcactggtacaaatgccccaacaatcatgtgtacgcc
ataggagactgtggaggtgccacggagagacggcactgcccagaatgcaatgaagccata
ggaggtaccaaccatacgctggtcagcggaaatcaggtggcatcagaaatggacggggca
caacatgcagcctggtctgaagccaacaacctccagaacttcggaggcttgggatttgct
tag
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integrated database retrieval system