Acipenser ruthenus (sterlet): 117422277
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Entry
117422277 CDS
T07327
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117422277
Transcription factors [BR:
arut03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117422277
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
117422277
NCBI-ProteinID:
XP_034783538
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All DBs
Position
16:25626815..25862747
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AA seq
955 aa
AA seq
DB search
MIRIFPDFSVQVTAAAGGGAGGVPAGPGVGRVPGTANGNPQNVQGITSYQQSDPYWERPA
NASSCSASRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAIGAQRRRSPNAMA
TEIFEQHLGSHILQSLDGFVFALNKEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTSPSLLAADNTLERS
FFMRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRLSLTHGRTVPIQIMGMVVIAHALPPPT
INEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSH
LDLLNKGQCVTKYYRWIQKNGGYIWIQSCATIAINAKNANEKNIIWVNYVLSNPEYKDTP
IDIAQLPSLPEKASESSETSDSDSDSKENSEDNENSKSDGKGNQSENSEDPESESKKQPG
SQSDNEMNCNEDGNSSSNQESRDSEDSFEHSDFESNKAAEVDSYDTLGSMQIKVERYVEG
DSELRLHSRESVTSDSAKDSDSAGEAGTASSSKHQKRKKRRKKQKGGSVTRRRLSSTSSP
NGLDPALGDQPRLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMT
KPPSSDHFPSPQASSSALHVAIPDSVLTPPGTETAGSRKTQFSSSSSSTSSSATSLAPVS
SDPLSPPLSASPREKQQGTPSTSSSLLYTGDLEALQKLQAGNVVLPLVHRVTGTLATTST
AAQRVYTTGTIRYAPAEVTLAMPGNLLPNTHAVNFVDVNSSSFGLDPKTPMEMLYHHVHR
LNMSGPFGGAVSGASLTQMPTGNVFTTAEGLFSTLPFPVYSNGIHTTQTLERKED
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaatcttcccggatttcagtgttcaggtgacggctgcggccggtggaggagcc
ggtggagtgccagctggtcccggggtgggaagagtccccggtactgcaaatggcaacccc
caaaacgtccagggcatcacttcatatcagcaaagcgacccctactgggagaggccagct
aatgccagctcctgttcagcttctaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaagcattgagaaaagagaagtcgcgagatgccgcccgctct
cgtcgtggaaaggagaactttgagttctacgagctggcgaagctcctgccactcccaggc
gccatcaccagccagctcgacaaggcctccatcatccgcctcaccatcagctatcttaaa
atgcgagactttgccaatcaaggggatcccccctggaacctgaggatggaagggcctcca
cccaacacctctgtgaaagctataggagcccagcgcaggagaagtcccaatgctatggcg
actgagatttttgaacaacatctgggaagccacattctgcagtctctggatggatttgta
tttgcactaaacaaagaaggaaagtttttatacatctctgaaactgtgtctatctacttg
ggactttcacaagtggagctgacaggcagcagtgtgtttgattacgttcacccaggagac
catgtggaaatggcagagcagctgggcatgaagcttcccccgggacgaggcctcctctcg
cagggcacagccgaggatggcgccagctcagcatcttcatcgtcgcagtccgagaccccc
gagccagtggaatccaccagccccagtttactagctgctgacaatacgctggagcgctcg
ttttttatgcgaatgaaatctacactgaccaagagaggagtccacatcaaatcatctgga
tacaaggttattcatgtaactggacgcttacgcattaggctgtccctgactcatggacgg
acggtccccattcagatcatggggatggtggtcattgcccatgctttgcctcctccaaca
atcaacgaagttagaatcgactgccagatgttcgtcacccgagtaaatatggacctcaat
attgtttactgtgaaaatagaattagtgattacatggatctgactcctgtagacattgtg
ggcaagagatgttatcatttcattcacgctgaagatgtggaagggatcagacacagtcac
ttagacttactgaataagggacagtgtgttaccaagtactatcgatggatacaaaagaat
ggagggtatatctggatccagtcttgcgccactattgccattaacgccaagaatgccaat
gaaaagaatatcatctgggtcaattatgtactcagtaacccagagtacaaggacactcca
atagatattgcacagcttcccagtctcccagagaaagcctcggaatcctcagagacctct
gattccgattccgattccaaggagaattcagaggacaatgagaactccaagtctgatggg
aaggggaaccagtctgagaacagtgaagaccctgagtctgagagcaagaagcagccaggg
agccagtcggacaacgaaatgaactgcaatgaggacgggaacagctccagcaaccaggag
agtcgggacagcgaggacagcttcgagcactccgactttgagagcaacaaggctgccgag
gtggacagctatgacacgctgggctccatgcagatcaaggtggagcggtacgtggaagga
gactccgagctccggctgcacagtcgcgaatcagtaacctcagacagtgccaaggactcg
gatagtgcgggggaggcaggcacggcgtcttccagtaagcaccagaagaggaagaagagg
aggaaaaaacagaagggaggcagcgtgaccaggcgcaggctctccagtacttcgagcccc
aatgggctggacccagcattgggggaccagccccggctgctctcctcaccaaacagtgcc
tcagtgctcaaaatcaaaactgaaatctcagaacctatcaactttgacaatgatagcagt
atttggaactatcctcccaacagggagatctcaaggaacgaatccccctatagtatgacc
aagccccccagctctgatcacttcccctctccacaagccagcagcagtgctttacatgtc
gccattcctgactctgtcctcaccccaccagggactgagacagctggcagccgcaaaact
cagttcagcagcagcagcagcagcacctcctccagcgccaccagcctggcgcctgtctcc
tcggaccctctgtcccctcctctctcggcctccccgcgagaaaagcagcagggaactcca
agtacttccagctcgttactatacactggggacctagaagccctccagaagttacaggct
ggcaacgtggttcttccactggttcacagggtaacagggaccctcgccaccaccagcact
gccgcacaaagggtctataccactggcaccatccgttacgctccagctgaagtaacctta
gcgatgccgggcaatttgctcccaaacactcatgcagttaactttgtggacgtcaacagc
tccagttttgggctcgaccccaagacacccatggagatgctgtaccaccacgtccaccgg
ctgaacatgtcagggccgtttgggggagcggtgagcggagccagtctgacccaaatgcct
acagggaatgtctttactacggcagaggggctattctcaactcttccatttcctgtgtac
agcaatggaatccacaccacacaaactctggaaagaaaagaagattaa
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