Acipenser ruthenus (sterlet): 117422413
Help
Entry
117422413 CDS
T07327
Name
(RefSeq) protein Smaug homolog 1-like isoform X1
KO
K27396
protein Smaug
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117422413
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117422413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
Vts1
SAM_2
Motif
Other DBs
NCBI-GeneID:
117422413
NCBI-ProteinID:
XP_033893303
LinkDB
All DBs
Position
16:complement(30202715..30228965)
Genome browser
AA seq
684 aa
AA seq
DB search
MFRDQVRVLAGWFKGWNECEQTVALLSLLKQVSRTQARFLQLCLEHSLADCTELQVLELE
ANNPVLISQWQGEPKERVLSLVLTHLPLLQPGNVEAKGEYMQLLPNILAHSIEHGRHLEE
SRQLLSYALIHPATSLEDRAALALWLNHLEERAAARADSLERAQTPHHLYPHHQRHGSDD
RLNGWQSPRDSGFGGGGWHQQGCENGHLSLYPSTSVPSTINALGTASSANTILPGGHSGQ
HSPLKRSVSLTPPMSASERQPLGHGWLSQEDLRSRGPVPADHAPLSPQSSVASSGSGGSE
HLDEGLHMSGMAHCTTFHEEGSGMRDVPAWLKSLRLHKYAALFSTMTYDEMMSLTERQLE
SQNVTKGARHKIVISIQKLKERHMVLRSLEKDVLEGGGLRAPLQELHQMILTPIKAYSGE
DLEQRPLPGSEGKGITLSSQLGGGEGESGGVLISEGDLPAQFTRVMGKVCTQLLVSRADE
ENISSYLQLIDRCLIHEAFTETQKKRLLSWKQQVQKLFRSLPRKSLLDMAGYRQQRSRSY
CQSNSLPTAGCVGGGVMSRRSPRQFQVPSRSLPGVRLGLLGTSSILGASQRSPASTLSGH
KQGRQGLWFANPGGSNSMPSRTHSSVQRTRSLPVHTTPHNMLLFQQAEFQVPVTEPDINN
RLESLCLSMTEHALGDGVDRTSTI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcgaccaggttagagtgctggccggttggttcaagggctggaatgagtgcgag
cagacggtggcgctgctgtcgctgctgaagcaagtgagcaggactcaggcacgctttctg
cagctctgtctcgagcactctcttgcggactgcaccgagctgcaggtgctggagttagaa
gcgaacaaccctgttctgatcagccagtggcagggtgaacccaaggagcgggtcctttct
ctggtgctgacccacctgcccctgctgcagccgggcaacgttgaggccaagggggagtac
atgcagctgctgcccaatatcctggcgcactccatcgagcacgggcgccacctggaggag
agccggcagctgctgtcgtacgcactgatacacccggccacgtctctggaggaccgggca
gcgctggcgctgtggctgaaccacctggaggagcgtgctgccgcacgggcagactctctg
gagcgtgcccagacccctcaccacctctaccctcaccaccagcggcacggctcagacgac
cggctcaacggctggcagagcccccgggactcgggctttggcgggggcggctggcatcag
caggggtgcgagaacgggcacctctccctctacccctccacctccgtgccatccaccatc
aatgccctcggcactgccagcagcgccaacaccatcctgcccggtgggcacagcggccag
catagccccctcaagcgttcggtgtccctcacccccccgatgagcgcttcagagcggcag
cccctcggacacggctggctgtcccaggaggacctgcgctcgcgaggccccgtccccgcc
gaccacgcgcccctgtccccccaaagcagtgtggcgtcctcgggcagcgggggcagcgag
cacctggacgagggcctgcacatgagcggcatggcacactgcaccacattccacgaggag
ggcagcggcatgagggacgtgccagcctggttgaagagtctccgtctccacaagtacgca
gctctcttctcaaccatgacctacgatgagatgatgtcactgacagagaggcagctggaa
tcgcagaacgtcaccaaaggagcgcggcacaagatcgtcatcagcatccagaagctgaaa
gagcggcacatggtgctgcggtccctggagaaggacgtcctggaggggggcggtcttcgc
gcccctctgcaggagctgcaccagatgatcctgacgcccatcaaggcctacagcggagag
gatttggaacagcggcccctgccaggctccgaggggaagggcatcaccctgtcatcgcag
ctgggagggggtgagggggagtcggggggcgtgctcatctcagaaggggatctccctgca
cagttcacacgagtcatgggaaaagtgtgcactcagctcctcgtctccagagccgatgaa
gagaacatcagctcctacctgcagctcatagacagatgtctaatccacgaggccttcaca
gagacgcagaagaagcgcctgttgtcatggaaacagcaggtgcagaagcttttcaggtcg
ttaccgcggaaatccctcttggacatggcagggtatcggcagcagaggagccgtagctac
tgtcagtccaactccctgccgacagcgggctgcgtggggggaggggtgatgtcgcggcgg
agcccacggcagttccaggtgccatcgcgcagcctgcccggagtaaggctcggcttgctg
ggaaccagcagcatcctgggggcatcccagcgcagccctgccagcactcttagtggacac
aagcagggcaggcagggcctgtggtttgccaaccctgggggtagtaacagcatgcccagc
cggactcacagctcggtgcagcgcacacgttcactgcccgtccacaccacgccacacaac
atgctcctgttccagcaggctgagttccaggtgccagtgacagaaccagatatcaacaat
cgcctggaatccttgtgcctgagcatgaccgagcatgcgttgggagacggtgttgaccgg
acatcgaccatctga
DBGET
integrated database retrieval system
