Acipenser ruthenus (sterlet): 117422611
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Entry
117422611 CDS
T07327
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03040
Spliceosome
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117422611
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117422611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117422611
Spliceosome [BR:
arut03041
]
Common components
Common spliceosomal components
SR proteins
117422611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Transformer
Motif
Other DBs
NCBI-GeneID:
117422611
NCBI-ProteinID:
XP_033893702
LinkDB
All DBs
Position
16:complement(15296212..15306240)
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AA seq
286 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGFGHIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCNERVTIEHARSPRGRGGGGAGGGSGGGGGGGGRFSPRFSSYRQTRGSMYGPPVRTEH
RIIVENLSSRISWQDLKDMMRKVGEVTFVDAHRSNKNEGVVEFASHSDMKNALDKLDGTE
LNGRKLKLTEDRKRKSRSRSRSRSYTRSRSRSRSRSRSKSPSRSRSRNRSRTRSRSVSHS
PERKPLPRAAPRSPSRSRSKSRSHSRSPPVQKRQSRSRSPSAESQH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgagtgttcatcggtcggctgagcccccacgccagagagagggacgtg
gagaagtttttcaaaggatttgggcacattagggaggtcaatctaaaaaacggctttggc
tttgtggagtttgatgaccacagagatgctgatgatgcagtctatgaactcaatggaaaa
gaactgtgtaatgaaagagtcacaatagagcatgcccgctctcccagagggagaggaggt
ggaggagctggaggtggaagtggtggtggaggaggtggtggtggaaggttctctccgcgg
ttcagcagctatcgtcagactcgtggctcaatgtatggtcctcctgtgcgcacagagcac
agaatcattgttgagaacctctcgtcccggataagttggcaggatctgaaggatatgatg
aggaaggttggtgaagtcacgtttgtggatgcacacagatccaacaagaatgaaggagtg
gtggaatttgcttcacacagcgatatgaagaacgcccttgataaactagatggaactgag
cttaacggacgcaaactcaaactgactgaagatcgcaagaggaagagcagaagccgctcc
cgctccaggagctacaccaggtctcgcagtcgttcccgatccaggagccgttccaaatcc
ccgagcaggagccgaagcaggaatcgcagccgtaccaggtcccgctcggtcagccacagc
ccagagaggaagccccttccccgggcggccccgcgctccccctcccgctctcgctccaag
tctcgatcccactcccgatcccctccagtgcagaagaggcagtccagatccaggtccccc
tcggctgagagccagcactga
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