Acipenser ruthenus (sterlet): 117422870
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Entry
117422870 CDS
T07327
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117422870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arut03009
]
117422870
Ribosome biogenesis [BR:
arut03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117422870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WDR55
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
NBCH_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
KNTC1_N
DUF7165
PEP5_VPS11_N
PD40
SGL
Motif
Other DBs
NCBI-GeneID:
117422870
NCBI-ProteinID:
XP_033893967
LinkDB
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Position
18:8972735..8990996
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AA seq
535 aa
AA seq
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MGKNRTDTPGSKRVAVKRSTDSGNIEKECSQMKREEIKRMRHLETVTALGEKEDAEKYLE
ELVFGAEDELLERLGAAETKGAVSGNLLDEDSSDSEVENEARFQVQSAQKAAWEDEDDQG
EEIVDMTHRFRKDMVKSDAEKQLPKGKLQQRLREQFQRAMGGTPAWAEKRVLKKKKGKKS
EEDDGSEEEEEEENDLLHRTGNFVTSSKSLPKGFIEIKNCLHANNNRPSDVCLTSVQFHP
SAQVIMTGGVDQSISLFQVDGKTNPKIQSIHLEKFPVYKARFSADGEQVIATSMHNKMFY
VYDMMGGKIIPVYGVRGLEEKRVKQFEVSPDGSLLLLTGTSGYLHLLTMKTKELVSSMKI
NGKAVGAAFSPDGSKIYTNSDEGEVFVWDVKSRTCLNRFTDEGCLKGTCIAVSRNGQYLA
CGSNSGVVNVYSHDVCLQESNPKPLKAIMNLVTSATSLSFNPTTEILAVASNAADEAVKL
VHIPSFTVFSNFPVMKKKAIHLAQCMDFSPRSGFFSIATNKGKALLYRLKHYTDF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaccgcaccgacacacccggatcgaagcgtgtggccgtgaaaaggagcaca
gattccggtaacattgagaaggaatgcagccagatgaagcgagaagaaatcaaaagaatg
agacacttggaaacggtgacggcgctgggcgagaaggaagatgctgagaagtatttggaa
gagttggtgtttggagcagaggatgaacttctcgagaggctcggcgctgcagagactaaa
ggagctgtgagtgggaatttgctggacgaagactccagtgattcggaagtagaaaatgaa
gcccggttccaggtccagtctgcccagaaggctgcctgggaggacgaggatgaccagggg
gaggagatagttgacatgactcaccgcttcaggaaagatatggtgaagagtgatgcggaa
aagcagctgccgaaggggaaattacagcagagactgagggagcaattccagagagcaatg
ggtggcacgccagcatgggcagaaaaaagggtgttgaaaaaaaagaaaggcaagaaaagt
gaagaagatgatggcagtgaagaggaggaggaggaggagaatgatttgctgcataggact
ggcaactttgtgacatcttccaaatctctccccaaaggtttcatagagataaaaaactgc
ttacatgcgaacaacaaccgaccttcagatgtctgtttaacaagcgttcagtttcacccc
tcggcccaggtgatcatgactggaggggtagaccagtctatttcccttttccaggtggat
ggcaagactaatccaaaaatccagagtatccacctagagaagtttcctgtatacaaggcc
cgcttcagtgctgacggagaacaagtcattgcaaccagcatgcataataaaatgttctac
gtgtatgatatgatgggagggaaaatcatacccgtctacggtgtcagaggattagaagag
aaacgagtaaagcagtttgaggtttctccagatggttcactgcttcttctaactgggact
tcaggatatctccaccttctgacaatgaagacaaaggagctggttagcagcatgaagatc
aatgggaaagccgttggtgctgccttctcccctgatggaagcaaaatctacaccaactct
gatgaaggggaggtctttgtttgggatgttaaaagcaggacttgcctaaataggtttaca
gatgaaggctgtttaaaaggcacgtgcattgctgtgtccagaaacggacagtatttggct
tgtggatcgaattctggagtggtaaacgtctactcgcacgatgtatgtcttcaggaatca
aaccctaagcctttaaaggccataatgaatctggtgacatcagccacttccttgtctttt
aatccaaccacagaaatccttgcagtggcttccaacgcagcggatgaagcagtcaaactg
gtacacatccctagttttacagtattttcaaacttccctgtcatgaaaaagaaggccatt
cacctggcacagtgtatggacttctcccctagaagtggctttttctccatcgcaaccaac
aagggcaaagctttattgtacaggttaaagcattacacagatttttaa
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