Acipenser ruthenus (sterlet): 117422903
Help
Entry
117422903 CDS
T07327
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117422903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117422903
03036 Chromosome and associated proteins [BR:
arut03036
]
117422903
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117422903
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117422903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_19
Motif
Other DBs
NCBI-GeneID:
117422903
NCBI-ProteinID:
XP_033894028
LinkDB
All DBs
Position
18:1777323..1785910
Genome browser
AA seq
652 aa
AA seq
DB search
MEEVDVEPAITVIPGVDSGQRHMGFVWGPGDILLYETQRKGTGSGEAGCPLIHVVRKDED
IYSPILRKLFNESHHIFVGLQQSKEETSSKTKRPQFVSVSKNYRSVIRACMEELQQVAVS
TRDTALSTQYCSQVSILLAVELIWNLCEVLFIEAAPAGSLLLHLLDWVRLHKADVDEKAQ
EVLHSDSPTRHHKYWDVVICYVLQGRMDEARQMLAKQASQQPAARSMFKTLDSLMKKMPV
FNPVGSQTLTEFDLKWRHWHEECELHLQDGSFSSNSNLETICKILLGHEEALLNQKEQLS
TWYHLLVTRLLYTHPSVKPTELHYYAQSSMDLFLDNRSAPEPLDSILLAAFEFDIHQVIK
DCSIALSNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFAHHSLWQLAVD
YFDHCPEFGRMYLELQIERVPLDTERKALKVLRICEQRQLAEQVRSICKIMAKKAVRNNR
LGSALSWSIRAKDAAFATLISDRFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHKLYGEKRFAEAAKLLLSLMTARIAPRSFWMTLLTDALPLLEQKQVIFSADQTYELMH
CLEELMSGKTEPSEKRNVQEEDIETTKVELLRLALARNLAAAVVKEGTVDSL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagacgtggagcccgctattaccgtgatccctggggtggattcgggtcag
aggcacatggggtttgtgtggggtcctggagatatcctgctgtatgagacacagcgcaag
gggacaggctccggcgaagcaggctgccctttaattcacgtggtcaggaaggacgaggat
atttactctccgattctgcgcaaactcttcaacgaatcccatcacatctttgtggggctg
cagcagagtaaggaggagacgtccagcaaaacgaagagaccgcagtttgtcagtgttagt
aagaactacagatcagtgataagagcatgcatggaggaactacaacaagttgcagtttct
acacgtgacactgccttgtcaacacaatactgcagccaagtttcgattctactggctgtg
gagctgatttggaatctatgtgaggtcctcttcattgaagcagccccagcgggctctctc
ctgctgcatctcttggactgggtccgactgcacaaagctgatgtggatgagaaggctcag
gaggtcctgcacagcgacagcccaacgaggcaccacaagtactgggacgtggtgatctgc
tacgtgctgcagggacggatggatgaggccaggcaaatgttggccaagcaggcaagccag
cagccagcagccagaagtatgttcaaaacactggacagcctcatgaagaaaatgccagtc
ttcaatccagttggcagtcagacgctgacagagtttgatttgaagtggagacactggcac
gaggagtgtgagctgcacttgcaggacgggtccttcagctccaactccaacctggagaca
atctgcaagattcttctaggccatgaagaggctctgctgaaccagaaggagcagctttcc
acttggtaccatctgcttgtgaccagactgctgtacacacacccctctgtgaaacctaca
gaactccactactatgcccagtccagcatggatttgttcctggacaaccggagtgccccc
gagccgctggacagcatcctcctggctgccttcgagtttgacattcaccaggtcatcaag
gactgcagcattgctctcagtaactggtggtttgtagctcatttgacagacctgttggac
cactgcaaactcctgcagtcccataaccttcactttggctccaatctgagagagttcctc
ctcttggaatatgcgtcaggactgtttgcacaccacagcctgtggcagctggcggtggat
tacttcgatcactgcccggagtttgggaggatgtacctggagctgcaaattgagagggtt
cccctggacacggagcgcaaggccctcaaggtgctgcggatctgtgagcagaggcagttg
gcagagcaagtgcgtagcatctgtaagatcatggcaaagaaagccgtgcgaaacaaccgt
ctgggctcggcgctgtcctggagcatccgagctaaagacgctgccttcgccaccctcatc
tccgacaggtttctgcaggattattgtgctcggggaaccttctctgacctggacctcatc
gacaatctggggcctgccatgctgctcagcgaccggctcaccttcctagggaagtaccgt
gagttccacaagctgtacggagagaagaggttcgctgaggctgccaagctgctgctctcg
ctcatgacggccagaattgccccccgtagcttctggatgaccctccttactgacgcactg
cccctgctggagcagaaacaggtgatattttcagccgatcaaacctacgagctgatgcac
tgtctggaggagctgatgtcgggcaagactgagcccagtgagaaacgtaacgttcaggag
gaagatatagaaaccaccaaagtggagcttctgcgccttgctttggcacggaacctggct
gcagccgtagtgaaggaggggacagtggactcgttataa
DBGET
integrated database retrieval system
