Acipenser ruthenus (sterlet): 117422963
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Entry
117422963 CDS
T07327
Symbol
gpc1a
Name
(RefSeq) glypican-1
KO
K08107
glypican 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
arut00535
]
117422963 (gpc1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
arut00537
]
117422963 (gpc1a)
Proteoglycans [BR:
arut00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117422963 (gpc1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
arut00537
]
Others
117422963 (gpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Nro1_C
Motif
Other DBs
NCBI-GeneID:
117422963
NCBI-ProteinID:
XP_033894118
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Position
18:complement(14793365..14889208)
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AA seq
557 aa
AA seq
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MDLRLALFYVGFLTASALGENSSSKARSCSDVRQVYSAKGFSLTGVPQTEISGEHLRICP
QGYTCCTSQMEETFSNLSRREFEGRVKEAGRSLQAMLNAQHKNFDGYFLDLLNKSERSLQ
DMFSKTYGELYTSNAKIFSDLYTELRHYYRGANLNLEEALHEFWTRLLERLFRRLNPQYQ
MSDEFLDCVVKHAETLKPFGEAPRELKLKVTRPFIAARSFVQGLDMASDVVRKVAQVPLS
PECTRAIMKLTYCPHCRGLPSIKPCTNYCRNVMKGCLANQADLHTEWRSFVDSMLQVAER
FNGMHSMETFVDMAPLKISDAIMNMNENGASISSKVFQGCGNPKLAGTRSSVGEEKKKRV
KVQSEEKEKAVTGLGMDKLVSDVSGKLREMQLYWVQLPNALCNDAVTAGPSSEDKCWNGM
NKGRYLPEVMGDGLASQINNPEVDIDITKPDITIRQQIMQLKIMTNRLKNAYNGNDVDFQ
DTSDDISGSGSAMGCPEEVCPSSSGRMIVPNTNKPNVYGLPNEKKQGVMGAGSHSYSRPH
SLPLLLPLLPLAGMFRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcgcctggcgctcttctacgtgggctttttgaccgcatctgctctcggggag
aactcaagcagcaaagctcggagctgctcggatgtccggcaagtctacagcgccaagggc
ttcagcctgaccggagtgccccagaccgaaatatcaggggagcacctgcggatttgcccc
cagggctacacctgctgcaccagccagatggaggagacattctcgaacctgagccgcaga
gagtttgaggggcgggtgaaggaggcgggacgatctctgcaggccatgctcaacgcacag
cacaagaacttcgacggctacttcctggacctgctgaacaagtcagagcgctccctgcag
gacatgttctccaaaacttacggagagctgtacacaagcaacgccaagatcttcagtgac
ctgtacacagagctgcggcactactaccgcggcgccaacctcaacctggaggaggcgctg
catgagttctggacgcggctgctggagcggctgttccgcaggctcaacccgcagtaccag
atgagcgacgagttcctggactgtgtcgtgaagcacgccgagaccctaaagcccttcgga
gaggcgccccgcgaactcaagctcaaagtcacgcggcccttcatcgcggcacgctccttc
gtccaggggctcgacatggctagtgatgtggtccggaaggtggcccaggtgcccctgagt
ccagagtgcactcgagccatcatgaagctgacgtactgtccacactgccgcggcctgccc
agtatcaaaccctgcaccaactactgtcgcaacgtcatgaagggctgcctggccaaccaa
gctgacctgcacacagagtggcgcagcttcgtagactcgatgctgcaggtggcagagcgg
ttcaatgggatgcacagtatggagacgttcgttgatatggctcctctgaagatctcagat
gccatcatgaacatgaacgagaacggagcttccatcagcagcaaggtgttccaggggtgt
gggaaccccaaactggctgggacgcggagctcggtgggggaggagaagaagaagcgagtg
aaagtacagagtgaggagaaagagaaagctgtgactggactggggatggacaaactggtg
tcggatgtgtcagggaagctgagagagatgcagctctactgggtccagctgcccaatgcg
ctgtgcaatgatgcagtgaccgcgggacccagcagtgaggacaagtgctggaacgggatg
aacaagggcaggtaccttcccgaggtgatgggcgatggcctggccagtcagatcaataac
cccgaggtggacattgacatcaccaagcctgacatcacaatccgacagcagatcatgcag
ctgaaaatcatgaccaaccggctgaagaacgcatacaacggaaatgatgtggacttccag
gataccagtgatgacatcagcggctcaggaagtgccatgggctgcccagaggaggtgtgt
cccagcagcagtgggcgcatgatcgtcccgaatactaacaaacccaacgtgtacggcctg
cccaacgagaaaaagcagggggtcatgggagcaggcagccactcctacagtcgcccacac
tccctccctctcctcctgccccttctgccactggctgggatgttcagacggtaa
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