KEGG   Acipenser ruthenus (sterlet): 117422979
Entry
117422979         CDS       T07327                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03013  Nucleocytoplasmic transport
arut03015  mRNA surveillance pathway
arut03040  Spliceosome
arut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117422979
  09122 Translation
   03013 Nucleocytoplasmic transport
    117422979
   03015 mRNA surveillance pathway
    117422979
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117422979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117422979
   03041 Spliceosome [BR:arut03041]
    117422979
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117422979
    TREX complex
     117422979
Spliceosome [BR:arut03041]
 Complex C
  Other components
   EJC/TREX
    117422979
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117422979
SSDB
Motif
Pfam: RRM_1 FoP_duplication F07F6_N RRM_occluded YHR127W_C
Other DBs
NCBI-GeneID: 117422979
NCBI-ProteinID: XP_033894143
LinkDB
Position
18
AA seq 273 aa
MADKMDMSLDDIIKQNRQRGGGRGGRGGGRGGSGGGRGAGAGRLGGSGFGGRGGGGGGSG
PMRSRQNLSRGRSSRPTPYSRPKQLPDKWQHDMFDNGFSSGGGGGGGGAGVETGGKLLVS
NLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPL
DGRSMNIQLVTSQIDTQRRPPVQSLSRGGSGGGMNRNRVGAVAGGFGGPNRRGGSRGRGR
GGRGRGGRSEKQPLSAEELDAQLDAYNARMDTT
NT seq 822 nt   +upstreamnt  +downstreamnt
atggctgataaaatggatatgtccttggacgatatcatcaagcagaaccggcaacgcggt
ggaggccgtggcgggagaggcgggggtcggggaggatctggcggaggccgcggtgctgga
gcaggccgactcgggggaagcggctttgggggacgcggaggcggcggcggcggatcgggc
ccaatgcggagtcgtcagaatctcagccggggaagaagcagcagacctacaccgtacagc
aggccaaagcagcttccagacaaatggcaacatgacatgtttgacaatggattcagcagc
ggaggaggtggaggtggcggcggtgctggagtagagactggtgggaagcttttggtttcc
aaccttgactttggtgtttctgatgcggatatccaggagttgtttgcagagtttggcacc
ctaaagaaagcagcagtacattacgaccggtcgggacggagtttagggacagcagatgta
cactttgagaggaaagcagatgcattaaaagcaatgaaacagtataacggggtccctctt
gatggtcgctcaatgaatattcagctagtcacgtcacagatagacacacagagaagacca
ccagtccaaagtttaagcagaggtggcagtggtggtggcatgaacagaaacagagtgggt
gctgttgccggtggctttggaggccctaatagacgtggtggttctagaggcagaggaaga
ggaggcagaggaaggggaggcagaagtgaaaaacagccgctgtctgcagaggagctggat
gcacagctggatgcttacaatgcaaggatggacaccacctaa

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