Acipenser ruthenus (sterlet): 117423023
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Entry
117423023 CDS
T07327
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117423023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117423023
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117423023
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117423023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
Mt_ATP-synt_D
DUF4407
zf-RING_6
BshC
Casein
Motif
Other DBs
NCBI-GeneID:
117423023
NCBI-ProteinID:
XP_033894254
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Position
18:1426907..1433843
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AA seq
630 aa
AA seq
DB search
MAGGPSSLSSLEDELTCSICLSIFHNPVTTPCGHNFCLSCLELTWKDDLAIGYSCPQCRH
QFYAKPTLHKNTVLSSVVATVSKSLKDKSQDETKGADSTVIFCDTCMVNKASKTCLTCMV
SYCDSHLRPHHENPVFQGHQLTEPLPDLQQHICKEHHKTLEFYCKEHSKCICGACLHSHL
TCRFTSLDGEIAEKEKHFKEKLVTLRSQIEKTKNVIFEMKGQQSSLRDSAANRKAAFEAE
YRVMKDLIEKEEREAMNLVDKEEQSAQAKIQSLMQKMTKNIEEMSSCKDQIESVLAQGQR
ITLLQCTVEFPQSVTFTPNAPGVNMNSKQMKTYKSSAVSLKKYLTDVLSLPVEERAQKLN
EASNKKVEKKKEKSDSTGALSLGEPLITFGTDQTSVVAGDSTPTKKPGDGNKKSNKSVKP
PKPKDPPKNTSCASKIVKPINPTEVTNRHDLLQNAAVLKLDARTAHKRIVISDNFTKASV
SDELMSYPDNPVRFTVCSQVLCSKGFSKGCHYWEVKLTSSNFCAIGVASSSIERKGPTSK
LGRNKESWCIEWFNVKLSAWHDQRETVLENPSSSRVGVLLDCDGGSLTFYSISDRVYPIH
TYSCRFPEAVYPAFWLFSSGTTVSLCKLTA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggaccgtcgtctttgagcagtttggaggacgaactgacctgttccatctgc
ctgagcattttccacaacccggtgaccacgccgtgcggacacaacttctgcctgagctgc
ctagagctcacctggaaggacgacctcgcgattggctacagctgccctcaatgcaggcac
cagttctacgccaaacccaccctgcacaaaaacaccgtgctgagcagtgtggtcgccacc
gtcagcaagtctctgaaagacaagagccaggacgaaacgaagggagcggattcgactgta
atattctgcgacacctgtatggtcaacaaagcctcaaagacttgtctgacgtgcatggtc
tcctactgcgactcccacctaagaccgcaccacgagaaccctgtctttcagggtcaccag
ctgaccgaacccctgcctgacctgcagcagcacatctgcaaagagcatcacaaaacgctc
gagttttactgcaaagaacacagcaagtgcatctgtggggcttgcctgcactcacactta
acctgccggtttacttcgcttgatggcgagatagccgagaaggaaaaacattttaaagaa
aaattggtgacgttgagaagccagattgagaaaacaaagaatgtcatttttgagatgaag
gggcagcagtcgtctctgagagattcagcggcgaacagaaaggctgcttttgaggcggag
taccgcgtgatgaaagacctcattgaaaaggaagagagggaggcaatgaacctagtggat
aaagaagagcaaagtgcccaagccaagatccagagcctcatgcaaaaaatgacaaaaaac
attgaggagatgagcagctgcaaagaccagattgaaagcgtgctggctcaggggcagcga
atcacacttctgcagtgcacagtagagtttccacagtcggtgacatttactcctaatgct
cccggagtcaatatgaattcaaagcaaatgaaaacgtacaaatcgagtgccgtctctctc
aagaaatacctcacagacgtattgagcctgccagtggaggagagagcccaaaagctgaat
gaagcatcaaacaaaaaggtggagaagaaaaaagaaaaatctgacagcacaggtgccctg
tccttgggtgaaccattaataactttcggcacagatcagacttctgttgtagctggggac
agcacccccacaaagaagccgggggacgggaacaagaagagcaataaatctgtcaaacca
ccaaagcccaaggatccacctaaaaataccagttgtgcgtcaaagatcgtcaaaccaatc
aatcctacagaagtgaccaatagacacgatcttctgcaaaatgctgccgtccttaagctg
gatgccagaaccgcacacaaaagaatcgtcatctcagacaatttcaccaaagcgtcagtc
tccgacgagctgatgtcgtacccagacaacccagtgagattcaccgtctgctcccaggtt
ctgtgctccaaaggattctccaaggggtgccactactgggaggtgaagttgaccagcagc
aacttctgcgccatcggcgtggcctccagcagcatcgagcgcaaggggccgaccagcaag
ctggggaggaacaaggagtcgtggtgcatcgagtggttcaacgtgaagctgtccgcctgg
cacgaccagcgtgagacagtcctggagaaccccagctccagcagagtcggggtgctcctg
gattgcgacgggggctccctcaccttctacagcatctcagacagagtgtaccccattcac
acctactcatgccgctttccagaagccgtctatccggctttctggctcttctccagcggc
accacagtgtctctgtgcaagctgactgcctaa
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