Acipenser ruthenus (sterlet): 117423167
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Entry
117423167 CDS
T07327
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117423167 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117423167 (dhx36)
03012 Translation factors [BR:
arut03012
]
117423167 (dhx36)
Enzymes [BR:
arut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117423167 (dhx36)
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117423167 (dhx36)
Translation factors [BR:
arut03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117423167 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
PhoH
NB-ARC
TsaE
AAA_14
NACHT
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117423167
NCBI-ProteinID:
XP_033894541
LinkDB
All DBs
Position
18:complement(27857807..27878463)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSYGYGNRSRGQWGGRDSAEGSDERWGRGRGGGGGGWRGGDGGGGGGGWRGEGGSSSSGS
YQNPPREPRDGQGAPRGRHPAHLKGREIGLWYAKRGGSGSGTKRKEEERQMRAVVQMDES
REEHIAKLLSSVQCKKSERELYPLTSQTSRTCKESQSRIVHTDSFSWKDTKPVNDGDLDF
LFQDIVRDSSLDQELKSDLQKKKSDPKYLEMRRFREKLPSYNMRKELVELIKSNQVVVVS
GETGCGKTTQVTQFILDDYIEKQMGSLCRIVCTQPRRISAISVAERVASERAEACGDGNT
CGYQIRLQCRLPRKQGSILYCTTGIILQWLRSDPHLSTISHIVLDEIHERNLQSDVLITI
MKDLMKFRDDLKIILMSATLNAEKFSKYFHNCPMIHIPGFTYPVKEYLLEDVIEMLRYCP
QNQDGRPKWKKRFMQGQMARPEKELKEEEYRESWPSYARSLRDRYSESTIDALEIMDNDD
KLDLSLIVALIRHIVLKEEDGAILVFLPGWDNISGLNDLLMAQQMFKSDNFVIIPLHSLM
PTVNQTQVFKKPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETHFDTQNNISTMTA
EWVSLANAKQRKGRAGRVQPGQCYHLYNGLRASLLDNYQLPEMMRTPLEELCLQIKILKL
GRIASFLRNALDPPFDETVNLAVTHLMDLNALDKNEDLTPLGFHLARLPVEPHIGKMILF
GALLSCLDPVLIIAASLSFRDPFVIPLGKEKLADTKRRELSKNSKSDHLTVVNAFWGWEE
AKRHGYKAERDYCWEHFLSSNTLQMLHNMKAQFAEHLLAAGFVGSKNPKDPSSNINSDNE
KLIKAVICAGLYPKVAKIRPSFSKKRKMVKVYTKPDGKVSIHPKSVNAEEAEFHYSWLIY
HLKMKTSSIFLYDCTEVTPYSLLFFGGDISIQKDQDQDTIAVDEWIVFQSPARIAHLVKD
LKRELDALLQEKIKNPQPVDWNDTKSKDCAVISAIIDLITTQESGAVKNFAPRFSGGYY
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggttatgggaacagaagccggggccagtggggaggtcgagactctgctgaa
ggcagtgatgagagatggggccgaggaagaggaggaggaggaggaggatggcgaggtgga
gatggaggtggaggtggaggtggatggcgaggggaaggtggttcttcgagctccggctct
tatcaaaacccaccccgagagccccgggacggtcaaggtgcaccgcggggccgtcatccg
gcccatctgaaaggccgggagattggtctttggtacgccaagagagggggatcgggatcg
gggacgaaaagaaaagaagaagagagacaaatgagagctgtggttcagatggacgaatct
agagaagaacacattgccaagcttctgagctctgtccagtgtaagaagtctgaaagagaa
ttatacccgttaacatcccagacttctcgaacctgcaaggagagccaaagcaggatcgtc
catactgacagttttagttggaaggacactaaaccagtcaatgacggagatctagacttc
ttgttccaagacattgttcgggattcaagtctagatcaagaactcaaaagtgaccttcag
aaaaagaaatctgatcctaagtacttggaaatgaggaggttcagggagaaacttccatca
tacaacatgagaaaggaattggttgaattgataaaaagtaaccaggtggtggtagttagc
ggagagacaggttgtgggaagacaacacaagttacccagttcattctggatgactatatc
gagaagcaaatgggatctctctgcagaatagtctgcacacagccacggaggatcagtgcc
atttctgtagcagaaagagtggcttcagaaagggctgaggcttgtggagatgggaacacc
tgtggctaccaaattagactacaatgccggttaccaaggaaacaaggctctatcttgtat
tgtaccacaggcatcatcctgcagtggctacgatcagatccgcacttgtctaccatcagc
cacattgttttggatgaaattcatgagaggaaccttcagtctgatgttctgataacaata
atgaaagatcttatgaaattccgagatgacctgaaaatcatcctcatgagtgctacatta
aatgctgagaagttttcaaaatatttccataactgtccaatgatacacatccctggtttc
acctatcctgtgaaagagtacctgttggaagatgtgatcgagatgttacgctactgtccc
caaaatcaagatggcagacctaagtggaagaagcgcttcatgcaaggtcaaatggctcga
ccagagaaggagctgaaagaggaggagtatcgagaaagctggcccagttacgcaagaagc
ctccgtgacaggtattcggagagtacgattgatgcattagagatcatggataacgatgat
aaacttgacctgtctctgattgtagcattgatcaggcacattgtcctgaaagaagaggat
ggagccatactggttttcctgccaggctgggacaatatcagtggtttgaatgatctgttg
atggctcaacagatgtttaagtcagacaactttgtcatcattccgctacactcgctgatg
cctactgtcaaccagactcaggtttttaagaaaccacctccaggtgttcgtaaaattgtg
attgctaccaatattgctgagacaagcatcaccatagatgatgttgttcatgtaatagat
ggaggaaagatcaaggagactcactttgacacacaaaacaatatcagcaccatgaccgct
gagtgggtcagtctggccaatgccaaacagaggaaaggtcgtgctggaagggtgcagcct
ggtcagtgttaccatctgtataatggattgagagccagcctcctggataattatcagttg
ccagaaatgatgaggactccattggaggaactctgcttacaaataaagatattaaagctt
ggcagaattgcctcatttctcaggaatgcattggatcccccatttgatgagactgtaaac
ttggctgtaacacatttaatggatctgaatgctttggataagaatgaggacctgactcct
cttggcttccacttggctcgattgccagtagagcctcacattgggaagatgatcctgttc
ggagctttgctgagctgcttggatccagtccttattatagcagcaagcctcagctttagg
gacccctttgtcattccactgggtaaagaaaagcttgcagatacaaagaggagagagttg
tcaaagaactctaaaagtgaccatctgactgtagtgaatgcattttggggctgggaggaa
gcaaaacgacatggctacaaagctgagcgtgattactgctgggagcactttctgtcttca
aacaccctccagatgctgcacaacatgaaagcacagtttgcagaacacctgctggctgcc
ggattcgttggcagcaaaaaccccaaagaccccagttccaatatcaactcagacaatgag
aagttaataaaagctgtcatctgtgctggattgtaccccaaagttgccaagatacgacca
agtttcagcaagaagagaaaaatggtgaaggtttacacaaaaccagatggcaaagttagc
atccaccccaagtcagtaaatgcagaagaagcagaattccactacagctggcttatctat
cacctgaagatgaaaacaagcagtatattcctgtatgactgcactgaagtgactccttat
tcactgctgttctttggaggtgatatctccattcagaaagaccaggaccaggacaccatt
gctgtagatgaatggattgtctttcagtctccagccaggatagcacatttagtaaaggat
ttaaagagggaacttgatgctcttcttcaagagaagattaaaaaccctcaacctgtggac
tggaatgatacaaaatcaaaggactgtgccgtcatatcagcaattattgatctaataact
acacaggagagtggcgctgtcaaaaactttgctccccgtttttctgggggatactattaa
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